Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024264 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 3.0e-32 141.0 60 100.0
CSS0015566 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.1e-26 122.5 60 88.3
CSS0008176 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.2e-24 113.6 57 84.2
CSS0029440 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.2e-24 113.6 57 84.2
CSS0041206 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.2e-24 113.6 57 84.2
CSS0017977 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.2e-23 112.5 54 87.0
CSS0048347 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.2e-23 112.5 57 84.2
CSS0045597 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.6e-23 111.3 57 82.5
CSS0034492 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 3.4e-23 110.9 57 82.5
Dinv16998 Davidia involucrata HOM05D002515 ORTHO05D002722 2.3e-19 98.2 54 70.4
Dinv43153 Davidia involucrata HOM05D002515 ORTHO05D002722 2.3e-19 98.2 54 70.4
Actinidia07036 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.1e-17 91.7 54 70.4
Actinidia37204 Actinidia chinensis HOM05D002515 ORTHO05D002722 3.4e-15 84.3 54 63.0
CSS0020060 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.1e-13 79.3 54 63.0
CSS0030774 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.1e-13 79.3 54 63.0
vmacro03074 Vaccinium macrocarpon HOM05D002515 ORTHO05D002722 5.4e-13 77.0 54 57.4
Oeu019195.1 Olea europaea HOM05D006354 ORTHO05D007773 1.6e-12 75.5 54 51.9
Rhsim13G0082900 Rhododendron simsii HOM05D002515 ORTHO05D002722 2.1e-12 75.1 54 55.6
CSS0025806 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.7e-11 72.0 57 56.1
GSVIVG01024972001 Vitis vinifera HOM05D002515 ORTHO05D002722 1.7e-11 72.0 54 55.6
CSS0044145 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.5e-10 68.9 54 55.6
Actinidia13143 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.5e-10 68.2 52 53.8
TAR633G1102 Trochodendron aralioides HOM05D002515 ORTHO05D002722 5.6e-10 67.0 54 53.7
MD11G1109700 Malus domestica HOM05D002515 ORTHO05D002722 1.2e-09 65.9 58 50.0
TAR636G0721 Trochodendron aralioides HOM05D002515 ORTHO05D002722 8.1e-09 63.2 52 51.9
Actinidia05311 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.3e-08 61.6 52 53.8
Cfa011498 Carpinus fangiana HOM05D002515 ORTHO05D006653 2.3e-08 61.6 54 50.0
Migut.D02105 Erythranthe guttata HOM05D002515 ORTHO05D002722 2.3e-08 61.6 48 47.9
Prupe.6G078200 Prunus persica HOM05D002515 ORTHO05D002722 2.3e-08 61.6 58 46.6
QL01p032098 Quercus lobata HOM05D002515 ORTHO05D002722 2.3e-08 61.6 49 55.1
TAR636G1413 Trochodendron aralioides HOM05D002515 ORTHO05D002722 5.2e-08 60.5 52 50.0
MD04G1128800 Malus domestica HOM05D002515 ORTHO05D002722 6.8e-08 60.1 53 50.9
PGR119G0741 Punica granatum HOM05D002515 ORTHO05D002722 8.9e-08 59.7 49 53.1
Haze_24092 Corylus avellana HOM05D002515 ORTHO05D002722 1.2e-07 59.3 54 48.1
Prupe.6G254700 Prunus persica HOM05D002515 ORTHO05D002722 1.5e-07 58.9 53 50.9
Oeu054145.1 Olea europaea HOM05D002515 ORTHO05D002722 2.0e-07 58.5 54 44.4
Dinv35606 Davidia involucrata HOM05D002515 ORTHO05D002722 2.6e-07 58.2 52 50.0
HanXRQChr04g0105731 Helianthus annuus HOM05D002515 ORTHO05D002722 2.6e-07 58.2 49 53.1
Rhsim04G0156800 Rhododendron simsii HOM05D002515 ORTHO05D002722 3.4e-07 57.8 52 44.2
Rhsim04G0157000 Rhododendron simsii HOM05D002515 ORTHO05D002722 3.4e-07 57.8 52 44.2
DCAR_005973 Daucus carota HOM05D002515 ORTHO05D002722 5.8e-07 57.0 34 58.8
Cpa.g.sc81.155 Carica papaya HOM05D002515 ORTHO05D002722 1.3e-06 55.8 49 51.0
MD12G1141400 Malus domestica HOM05D002515 ORTHO05D002722 1.3e-06 55.8 53 49.1
SalBow3G0449 Salvia bowleyana HOM05D002515 ORTHO05D002722 1.7e-06 55.5 42 47.6
Lalb_Chr24g0394151 Lupinus albus HOM05D002515 ORTHO05D002722 2.2e-06 55.1 41 56.1
Lsat_1_v5_gn_9_23360 Lactuca sativa HOM05D002515 ORTHO05D002722 2.9e-06 54.7 48 45.8
Ah.15g097300 Amaranthus hybridus HOM05D002515 ORTHO05D002722 3.7e-06 54.3 47 44.7
Thecc.09G300700 Theobroma cacao HOM05D002515 ORTHO05D002722 4.9e-06 53.9 54 46.3
MELO3C008878.2 Cucumis melo HOM05D002515 ORTHO05D002722 8.4e-06 53.1 59 40.7
FAN25G0844 Fragaria x ananassa HOM05D002515 ORTHO05D002722 8.4e-06 53.1 35 57.1
Potri.016G095500 Populus trichocarpa HOM05D002515 ORTHO05D002722 8.4e-06 53.1 54 44.4


User provided reference genes

Program Settings