Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024255 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 0.0e+00 1129.4 548 100.0
CSS0033247 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 0.0e+00 1129.4 548 100.0
Actinidia09859 Actinidia chinensis HOM05D004790 ORTHO05D005678 5.8e-247 857.4 553 76.7
vmacro12295 Vaccinium macrocarpon HOM05D004790 ORTHO05D005678 1.3e-241 839.7 554 75.1
Actinidia11039 Actinidia chinensis HOM05D004790 ORTHO05D005678 4.2e-237 824.7 532 76.5
Rhsim06G0143900 Rhododendron simsii HOM05D004790 ORTHO05D005678 7.9e-228 793.9 552 73.2
Dinv23649 Davidia involucrata HOM05D004790 ORTHO05D005678 1.6e-225 786.2 549 72.7
Hma1.2p1_0213F.1_g090370 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.4e-200 703.4 567 64.6
Oeu045846.1 Olea europaea HOM05D004790 ORTHO05D005678 8.8e-195 684.1 549 63.4
Cc05_g07060 Coffea canephora HOM05D004790 ORTHO05D005678 5.7e-194 681.4 547 62.9
Prupe.3G136400 Prunus persica HOM05D004790 ORTHO05D005678 9.7e-194 680.6 552 62.3
Ciclev10014904m.g Citrus clementina HOM05D004790 ORTHO05D005678 2.2e-193 679.5 548 64.4
Manes.13G147300 Manihot esculenta HOM05D004790 ORTHO05D005678 3.7e-193 678.7 548 63.3
MD09G1249000 Malus domestica HOM05D004790 ORTHO05D005678 6.3e-193 677.9 549 62.3
FvH4_6g26160 Fragaria vesca HOM05D004790 ORTHO05D005678 1.1e-192 677.2 547 62.9
Lj1A724T21 Lonicera japonica HOM05D004790 ORTHO05D005678 4.1e-192 675.2 533 66.2
RcHm_v2.0_Chr2g0126141 Rosa chinensis HOM05D004790 ORTHO05D005678 4.5e-191 671.8 549 62.8
Atru.chr6.3004 Acer truncatum HOM05D004790 ORTHO05D005678 4.2e-189 665.2 549 62.7
FAN02G0059 Fragaria x ananassa HOM05D004790 ORTHO05D005678 2.1e-188 662.9 547 62.0
MD17G1241500 Malus domestica HOM05D004790 ORTHO05D005678 3.4e-186 655.6 549 62.1
COL.COLO4_30176 Corchorus olitorius HOM05D004790 ORTHO05D005678 4.9e-185 651.7 545 61.3
Thecc.02G178300 Theobroma cacao HOM05D004790 ORTHO05D005678 8.3e-185 651.0 548 61.9
MELO3C013614.2 Cucumis melo HOM05D004790 ORTHO05D005678 2.0e-183 646.4 547 61.2
Gohir.D04G143900 Gossypium hirsutum HOM05D004790 ORTHO05D005678 2.7e-183 646.0 548 61.1
Gorai.012G129400 Gossypium raimondii HOM05D004790 ORTHO05D005678 2.7e-183 646.0 548 61.1
Oeu029923.1 Olea europaea HOM05D004790 ORTHO05D005678 2.7e-183 646.0 549 61.0
TAR627G0452 Trochodendron aralioides HOM05D004790 ORTHO05D005678 2.3e-182 642.9 550 61.6
Gohir.A04G104200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 3.8e-182 642.1 548 61.1
CsaV3_6G012960 Cucumis sativus L. HOM05D004790 ORTHO05D005678 5.0e-182 641.7 547 60.9
CiPaw.03G175600 Carya illinoinensis HOM05D004790 ORTHO05D005678 3.3e-181 639.0 549 59.4
TWI36G0090 Tripterygium wilfordii HOM05D004790 ORTHO05D005678 5.5e-181 638.3 550 60.0
ClCG02G017590 Citrullus lanatus HOM05D004790 ORTHO05D005678 7.2e-181 637.9 547 61.1
Duzib248G1314 Durio zibethinus HOM05D004790 ORTHO05D005678 1.4e-179 633.6 550 60.0
Migut.H01089 Erythranthe guttata HOM05D004790 ORTHO05D005678 8.9e-179 630.9 551 59.5
Manes.12G090600 Manihot esculenta HOM05D004790 ORTHO05D005678 9.8e-178 627.5 547 58.7
Eucgr.A01811 Eucalyptus grandis HOM05D004790 ORTHO05D005678 1.3e-177 627.1 547 58.9
MSTRG.12822 Avicennia marina HOM05D004790 ORTHO05D005678 1.7e-177 626.7 553 58.6
Nitab4.5_0000585g0100 Nicotiana tabacum HOM05D004790 ORTHO05D005678 4.6e-175 618.6 554 59.9
Sed0002654 Sechium edule HOM05D004790 ORTHO05D005678 2.9e-174 615.9 548 58.9
Nitab4.5_0007168g0010 Nicotiana tabacum HOM05D004790 ORTHO05D005678 9.5e-173 610.9 555 58.0
SGA_v2.0_scaffold109G31134 Striga asiatica HOM05D004790 ORTHO05D005678 1.6e-172 610.1 548 57.8
Cfa014604 Carpinus fangiana HOM05D004790 ORTHO05D005678 8.0e-172 607.8 550 58.7
CANSAT11G0193 Cannabis sativa HOM05D004790 ORTHO05D005678 4.0e-171 605.5 557 58.9
Peaxi162Scf00206g00710 Petunia axillaris HOM05D004790 ORTHO05D005678 3.4e-170 602.4 552 56.7
Potri.013G133200 Populus trichocarpa HOM05D004790 ORTHO05D005678 9.8e-170 600.9 548 56.0
CAN.G1655.2 Capsicum annuum HOM05D004790 ORTHO05D005678 4.9e-169 598.6 561 56.5
PGR042G3525 Punica granatum HOM05D004790 ORTHO05D005678 8.3e-169 597.8 544 57.4
PGSC0003DMG400021668 Solanum tuberosum HOM05D004790 ORTHO05D005678 7.0e-168 594.7 552 57.1
DCAR_013003 Daucus carota HOM05D004790 ORTHO05D005678 9.2e-168 594.3 549 57.9
Nn1g04055 Nelumbo nucifera HOM05D004790 ORTHO05D005678 2.0e-167 593.2 556 57.4
FAN05G3153 Fragaria x ananassa HOM05D004790 ORTHO05D005678 3.9e-166 589.0 494 61.1
QL08p038483 Quercus lobata HOM05D004790 ORTHO05D005678 5.0e-166 588.6 549 57.2
Cpa.g.sc34.151 Carica papaya HOM05D004790 ORTHO05D005678 3.6e-164 582.4 545 55.4
Sabra13G0113200 Salix brachista HOM05D004790 ORTHO05D005678 8.1e-164 581.3 548 53.6
Haze_13149 Corylus avellana HOM05D004790 ORTHO05D005678 1.4e-163 580.5 538 58.0
Gorai.013G075500 Gossypium raimondii HOM05D004790 ORTHO05D005678 5.2e-163 578.6 544 57.0
Hund01104 Selenicereus undatus HOM05D004790 ORTHO05D005678 6.4e-161 571.6 568 54.8
Sopen10g004250 Solanum pennellii HOM05D004790 ORTHO05D005678 5.4e-160 568.5 553 55.0
HanXRQChr17g0553511 Helianthus annuus HOM05D004790 ORTHO05D005678 9.2e-160 567.8 547 56.5
Solyc10g008420.3 Solanum lycopersicum HOM05D004790 ORTHO05D005678 9.2e-160 567.8 558 55.2
SalBow7G3762 Salvia bowleyana HOM05D004790 ORTHO05D005678 2.1e-159 566.6 573 52.9
Sc12g0003010 Simmondsia chinensis HOM05D004790 ORTHO05D005678 1.3e-158 563.9 564 53.2
Sabra19G0111100 Salix brachista HOM05D004790 ORTHO05D005678 3.0e-158 562.8 548 53.1
Lsat_1_v5_gn_4_65660 Lactuca sativa HOM05D004790 ORTHO05D005678 1.1e-157 560.8 550 53.6
Lsat_1_v5_gn_8_133340 Lactuca sativa HOM05D004790 ORTHO05D005678 7.3e-157 558.1 550 54.2
Sabra19G0112400 Salix brachista HOM05D004790 ORTHO05D005678 9.5e-157 557.8 549 53.4
Ah.01g015210 Amaranthus hybridus HOM05D004790 ORTHO05D005678 1.2e-154 550.8 560 52.1
THA.LOC104804061 Tarenaya hassleriana HOM05D004790 ORTHO05D005678 1.5e-154 550.4 549 52.6
Gohir.D13G066200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 4.4e-154 548.9 545 55.4
EL10Ac9g20754 Beta vulgaris HOM05D004790 ORTHO05D005678 2.4e-152 543.1 565 52.2
VMungo1080G1693 Vigna mungo HOM05D004790 ORTHO05D005678 5.4e-152 542.0 551 51.7
Glyma.12G203700 Glycine max HOM05D004790 ORTHO05D005678 1.1e-149 534.3 548 52.7
Glyma.13G298000 Glycine max HOM05D004790 ORTHO05D005678 1.5e-149 533.9 548 52.2
Thhalv10024944m.g Eutrema salsugineum HOM05D004790 ORTHO05D005678 4.3e-149 532.3 551 50.6
unitig_26.g9948 Utricularia gibba HOM05D004790 ORTHO05D005678 2.1e-148 530.0 551 51.0
Phvul.005G104500 Phaseolus vulgaris HOM05D004790 ORTHO05D005678 8.1e-148 528.1 548 51.5
AL7G24340 Arabidopsis lyrata HOM05D004790 ORTHO05D005678 8.4e-145 518.1 559 50.1
Carub.0007s1250 Capsella rubella HOM05D004790 ORTHO05D005678 2.7e-143 513.1 556 49.5
Sp7g26220 Schrenkiella parvula HOM05D004790 ORTHO05D005678 2.7e-143 513.1 551 49.4
CARHR235970 Cardamine hirsuta HOM05D004790 ORTHO05D005678 6.0e-143 511.9 553 49.5
AT4G28260 Arabidopsis thaliana HOM05D004790 ORTHO05D005678 5.1e-142 508.8 557 49.9
SalBow7G1856 Salvia bowleyana HOM05D004790 ORTHO05D005678 1.1e-141 507.7 493 55.2
MBI19_g19847_MAGBIO Magnolia biondii HOM05D004790 ORTHO05D005678 5.6e-141 505.4 572 49.0
A03p57970 Brassica napus HOM05D004790 ORTHO05D005678 8.1e-140 501.5 551 48.3
BraA03t14860Z Brassica rapa HOM05D004790 ORTHO05D005678 1.1e-139 501.1 551 48.3
BraA08t33977Z Brassica rapa HOM05D004790 ORTHO05D005678 1.8e-139 500.4 553 49.5
A08p20170 Brassica napus HOM05D004790 ORTHO05D005678 3.1e-139 499.6 553 49.5
AUR62037353 Chenopodium quinoa HOM05D004790 ORTHO05D005678 4.0e-139 499.2 567 48.7
Lalb_Chr22g0356521 Lupinus albus HOM05D004790 ORTHO05D005678 9.0e-139 498.0 535 48.0
Aa31LG11G10330 Aethionema arabicum HOM05D004790 ORTHO05D005678 1.5e-138 497.3 549 47.4
Duzib052G0346 Durio zibethinus HOM05D004790 ORTHO05D005678 2.0e-138 496.9 550 51.5
BcaC06g32632 Brassica carinata HOM05D004790 ORTHO05D005678 4.4e-138 495.7 549 49.2
BolC8t48743H Brassica oleracea HOM05D004790 ORTHO05D005678 4.4e-138 495.7 553 48.5
BcaB03g12561 Brassica carinata HOM05D004790 ORTHO05D005678 1.7e-137 493.8 552 48.9
C08p10710 Brassica napus HOM05D004790 ORTHO05D005678 1.7e-137 493.8 553 48.1
C07p56090 Brassica napus HOM05D004790 ORTHO05D005678 2.2e-137 493.4 551 49.2
BolC7t46084H Brassica oleracea HOM05D004790 ORTHO05D005678 2.9e-137 493.0 554 49.1
Lalb_Chr14g0366851 Lupinus albus HOM05D004790 ORTHO05D005678 9.6e-133 478.0 536 48.5
Hma1.2p1_3039F.1_g331970 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.1e-132 476.9 533 49.5
ECA234G1653 Erigeron canadensis HOM05D004790 ORTHO05D005678 4.8e-132 475.7 508 50.8
Gohir.A13G055800 Gossypium hirsutum HOM05D004790 ORTHO05D005678 1.5e-130 470.7 545 49.0
Ca_01506_v3 Cicer arietinum L. HOM05D004790 ORTHO05D005678 9.9e-130 468.0 551 45.4
Lj3g0014290 Lotus japonicus HOM05D004790 ORTHO05D005678 2.3e-126 456.8 549 46.8
GSVIVG01020532001 Vitis vinifera HOM05D004790 ORTHO05D005678 9.0e-123 444.9 546 46.9
SHI10412 Sapria himalayana HOM05D004790 ORTHO05D005678 3.4e-122 443.0 592 43.1
PSO675G6339 Papaver somniferum HOM05D004790 ORTHO05D005678 1.0e-121 441.4 551 44.5
PSO541G2110 Papaver somniferum HOM05D004790 ORTHO05D005678 6.5e-121 438.7 549 44.8
Aqoxy1G02499 Aquilegia oxysepala HOM05D004790 ORTHO05D005678 1.9e-120 437.2 549 43.0
TPR.G6443 Trifolium pratense HOM05D004790 ORTHO05D005678 2.3e-118 430.3 553 42.7
Medtr2g090285 Medicago truncatula HOM05D004790 ORTHO05D005678 3.9e-118 429.5 553 43.8
Hma1.2p1_1201F.1_g266610 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.1e-117 427.9 533 46.3
Zm00001eb044390 Zea mays HOM05D004790 ORTHO05D005678 3.4e-114 416.4 555 42.9
Zm00001eb044450 Zea mays HOM05D004790 ORTHO05D005678 5.3e-107 392.5 535 42.1
arahy.Tifrunner.gnm1.ann1.1EW4X0 Arachis hypogaea HOM05D004790 ORTHO05D005678 1.2e-106 391.3 560 41.1
arahy.Tifrunner.gnm1.ann1.DEE7JK Arachis hypogaea HOM05D004790 ORTHO05D005678 1.2e-106 391.3 551 41.7
BcaC06g32633 Brassica carinata HOM05D004790 ORTHO05D005678 5.1e-102 375.9 441 49.0
ATR0680G165 Amborella trichopoda HOM05D004790 ORTHO05D005678 5.7e-101 372.5 552 42.0
Hma1.2p1_3039F.1_g331990 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.4e-98 363.2 540 40.6
Hma1.2p1_1201F.1_g266630 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 8.5e-97 358.6 540 40.6
Hma1.2p1_3039F.1_g331980 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.6e-93 347.1 551 38.8
Os10g0500600 Oryza sativa ssp. japonica HOM05D004790 ORTHO05D005678 5.9e-90 335.9 498 40.0
CDE02G0639 Ceratophyllum demersum HOM05D004790 ORTHO05D005678 2.1e-87 327.4 576 37.0
Hma1.2p1_1201F.1_g266650 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.1e-83 315.1 499 38.5
Hma1.2p1_3039F.1_g332010 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.1e-83 315.1 499 38.3
Aa31LG11G14100 Aethionema arabicum HOM05D004790 ORTHO05D005678 4.0e-78 296.6 530 34.9
Psat5g271320 Pisum sativum HOM05D004790 ORTHO05D005678 2.5e-64 250.8 550 32.2
Hma1.2p1_1201F.1_g266640 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.2e-63 248.4 496 34.7
Hma1.2p1_3039F.1_g332000 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.2e-63 248.4 496 34.7
Hma1.2p1_1201F.1_g266660 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 8.0e-63 245.7 385 37.9
Prupe.3G136600 Prunus persica HOM05D004790 ORTHO05D005678 5.2e-54 216.5 145 71.7
HPP92_027303 Vanilla planifolia HOM05D004790 ORTHO05D005678 2.2e-52 211.1 268 45.9
Dinv26430 Davidia involucrata HOM05D004790 ORTHO05D005678 4.9e-52 209.9 313 42.8
AUR62042487 Chenopodium quinoa HOM05D004790 ORTHO05D005678 1.6e-50 204.9 395 34.4
FAN05G5699 Fragaria x ananassa HOM05D004790 ORTHO05D005678 7.8e-50 202.6 153 63.4
SEGI_40185 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 2.7e-42 177.6 495 28.9
Mapoly0001s0243 Marchantia polymorpha HOM05D004790 ORTHO05D005678 5.2e-38 163.3 550 27.3
SEGI_15900 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 7.6e-37 159.5 442 28.5
Pp3c8_24840 Physcomitrium patens HOM05D004790 ORTHO05D005678 4.9e-36 156.8 569 24.3
Pp3c23_21860 Physcomitrium patens HOM05D004790 ORTHO05D005678 1.5e-32 145.2 565 25.0
SMO111G0050 Selaginella moellendorffii HOM05D004790 ORTHO05D005678 7.6e-29 132.9 482 26.8
Hma1.2p1_0002F.1_g002210 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 6.0e-26 123.2 318 34.3
Peaxi162Scf00132g00037 Petunia axillaris HOM05D004790 ORTHO05D005678 3.6e-23 114.0 474 22.2
Sabra13G0109400 Salix brachista HOM05D004790 ORTHO05D005678 8.1e-23 112.8 98 59.2
TPR.G11082 Trifolium pratense HOM05D004790 ORTHO05D005678 3.4e-21 107.5 526 22.8
GSVIVG01029526001 Vitis vinifera HOM05D004790 ORTHO05D005678 4.5e-21 107.1 66 74.2
Sabra13G0113000 Salix brachista HOM05D004790 ORTHO05D005678 1.2e-18 99.0 88 51.1
FAN05G5117 Fragaria x ananassa HOM05D000001 ORTHO05D000424 8.7e-17 92.8 55 76.4
Sabra13G0109000 Salix brachista HOM05D000001 ORTHO05D000424 4.3e-16 90.5 56 64.3
Dinv17315 Davidia involucrata HOM05D004790 ORTHO05D005678 5.8e-13 80.1 84 44.0
Hma1.2p1_0002F.1_g002220 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.8e-13 80.1 81 50.6
AagrBONN_evm.TU.Sc2ySwM_228.2505 Anthoceros agrestis HOM05D004790 ORTHO05D005678 1.7e-12 78.6 129 31.0
Dinv07566 Davidia involucrata HOM05D004790 ORTHO05D005678 2.2e-12 78.2 190 27.9
Pp3c20_1230 Physcomitrium patens HOM05D004790 ORTHO05D005678 1.1e-11 75.9 408 21.8
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 1.2e-10 72.4 193 31.1
AagrBONN_evm.TU.Sc2ySwM_228.2348 Anthoceros agrestis HOM05D004790 ORTHO05D007542 1.1e-08 65.9 61 44.3
Dinv07569 Davidia involucrata HOM05D032653 ORTHO05D005678 1.3e-07 62.4 120 34.2
Dinv07568 Davidia involucrata HOM05D032653 ORTHO05D182718 2.8e-07 61.2 75 42.7
Dinv17313 Davidia involucrata HOM05D032653 ORTHO05D185244 3.7e-07 60.8 75 42.7
Hma1.2p1_0225F.1_g094730 Hydrangea macrophylla HOM05D000070 ORTHO05D003190 5.3e-06 57.0 157 26.1


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