Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024245 Camellia sinensis var. sinensis HOM05D022962 ORTHO05D012472 1.7e-97 359.8 244 100.0
CSS0047359 Camellia sinensis var. sinensis HOM05D022962 ORTHO05D012472 1.3e-84 317.0 244 93.4
CSS0013872 Camellia sinensis var. sinensis HOM05D022962 ORTHO05D012472 6.7e-70 268.1 231 76.6
CSS0038611 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 1.1e-59 234.2 235 57.0
Rhsim03G0042400 Rhododendron simsii HOM05D000009 ORTHO05D000008 7.3e-16 88.6 98 51.0
Hma1.2p1_1168F.1_g263080 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.6e-15 86.3 101 44.6
vmacro07813 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 3.6e-15 86.3 92 53.3
RhsimUnG0022400 Rhododendron simsii HOM05D000009 ORTHO05D000008 1.8e-14 84.0 97 48.5
Hma1.2p1_0973F.1_g243030 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.5e-13 78.6 102 44.1
Ca_22415_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 1.3e-12 77.8 105 44.8
Hma1.2p1_1755F.1_g300960 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.3e-12 77.8 102 44.1
Gohir.D03G053160 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.7e-12 76.3 97 46.4
Hma1.2p1_1755F.1_g300990 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.9e-12 75.9 102 44.1
Hma1.2p1_0924F.1_g237240 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.4e-12 75.5 102 42.2
EL10Ac4g07889 Beta vulgaris HOM05D000009 ORTHO05D000008 8.3e-12 75.1 104 37.5
Gorai.003G056000 Gossypium raimondii HOM05D000009 ORTHO05D000008 8.3e-12 75.1 124 41.9
Thecc.05G219400 Theobroma cacao HOM05D000009 ORTHO05D000008 2.4e-11 73.6 124 42.7
CANSAT80G2800 Cannabis sativa HOM05D000009 ORTHO05D000008 3.2e-11 73.2 95 42.1
EL10Ac4g07895 Beta vulgaris HOM05D000009 ORTHO05D000008 4.1e-11 72.8 104 36.5
Hma1.2p1_0924F.1_g237170 Hydrangea macrophylla HOM05D000009 ORTHO05D036403 4.1e-11 72.8 102 43.1
Hma1.2p1_1755F.1_g301010 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.1e-11 72.8 102 43.1
MD14G1072100 Malus domestica HOM05D000009 ORTHO05D000008 4.1e-11 72.8 97 42.3
Dinv06997 Davidia involucrata HOM05D000009 ORTHO05D000008 7.1e-11 72.0 107 42.1
Hma1.2p1_1250F.1_g270280 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.1e-11 72.0 102 42.2
Lj2A396T33 Lonicera japonica HOM05D000009 ORTHO05D003343 1.6e-10 70.9 105 41.9
Hma1.2p1_1755F.1_g300950 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.8e-10 68.6 101 42.6
VMungo1383G0812 Vigna mungo HOM05D000009 ORTHO05D000008 7.8e-10 68.6 98 38.8
RcHm_v2.0_Chr2g0117271 Rosa chinensis HOM05D000009 ORTHO05D000008 1.0e-09 68.2 83 42.2
Gohir.D03G053750 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.7e-09 67.4 96 45.8
Dinv43408 Davidia involucrata HOM05D000009 ORTHO05D000008 3.0e-09 66.6 108 45.4
Phvul.001G132800 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.9e-09 66.2 98 37.8
Phvul.001G132864 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.9e-09 66.2 98 37.8
Thecc.05G220700 Theobroma cacao HOM05D000009 ORTHO05D000008 3.9e-09 66.2 108 40.7
QL12p011837 Quercus lobata HOM05D000009 ORTHO05D000008 5.1e-09 65.9 83 41.0
FAN23G1263 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.6e-09 65.5 80 43.8
Hma1.2p1_0621F.1_g190830 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.6e-09 65.5 102 39.2
Lj5C512T4 Lonicera japonica HOM05D000009 ORTHO05D000008 6.6e-09 65.5 109 37.6
Thecc.05G220500 Theobroma cacao HOM05D000009 ORTHO05D000008 6.6e-09 65.5 108 39.8
Medtr4g119195 Medicago truncatula HOM05D000009 ORTHO05D000008 8.6e-09 65.1 113 36.3
Thecc.05G220900 Theobroma cacao HOM05D000009 ORTHO05D000008 8.6e-09 65.1 108 40.7
Lj5C461T2 Lonicera japonica HOM05D000009 ORTHO05D000008 1.1e-08 64.7 108 35.2
Glyma.19G135400 Glycine max HOM05D000009 ORTHO05D000008 1.5e-08 64.3 100 38.0
Hma1.2p1_1168F.1_g263100 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.5e-08 64.3 68 47.1
Lj5C466G1 Lonicera japonica HOM05D000009 ORTHO05D000008 1.5e-08 64.3 108 35.2
Oeu023036.1 Olea europaea HOM05D000009 ORTHO05D000008 1.5e-08 64.3 96 40.6
RcHm_v2.0_Chr2g0117561 Rosa chinensis HOM05D000009 ORTHO05D000008 1.5e-08 64.3 98 36.7
TPR.G18255 Trifolium pratense HOM05D000009 ORTHO05D000008 1.5e-08 64.3 101 39.6
Atru.chr1.3962 Acer truncatum HOM05D000009 ORTHO05D000008 1.9e-08 63.9 109 37.6
FAN02G0737 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.5e-08 63.5 83 42.2
FAN05G4722 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.3e-08 62.8 83 42.2
Hma1.2p1_0924F.1_g237270 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.3e-08 62.8 75 44.0
QL07p029392 Quercus lobata HOM05D000009 ORTHO05D012472 4.3e-08 62.8 100 43.0
FAN09G3902 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.6e-08 62.4 83 41.0
Phvul.001G132632 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.6e-08 62.4 107 37.4
Hma1.2p1_1168F.1_g263060 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.3e-08 62.0 102 38.2
EL10Ac6g14531 Beta vulgaris HOM05D000009 ORTHO05D000008 9.5e-08 61.6 112 32.1
Phvul.007G254400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 9.5e-08 61.6 74 47.3
Phvul.007G254900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 9.5e-08 61.6 97 42.3
QL02p016325 Quercus lobata HOM05D000009 ORTHO05D000008 9.5e-08 61.6 76 48.7
FvH4_6g51570 Fragaria vesca HOM05D000009 ORTHO05D000008 1.6e-07 60.8 98 36.7
FAN05G3858 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.6e-07 60.8 83 41.0
Prupe.6G243900 Prunus persica HOM05D000009 ORTHO05D000008 1.6e-07 60.8 89 36.0
Hma1.2p1_1041F.1_g251000 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.1e-07 60.5 82 42.7
Prupe.6G243400 Prunus persica HOM05D000009 ORTHO05D000008 2.1e-07 60.5 89 37.1
PGR004G1496 Punica granatum HOM05D000009 ORTHO05D000008 2.1e-07 60.5 103 36.9
arahy.Tifrunner.gnm1.ann1.WRA2D9 Arachis hypogaea HOM05D000009 ORTHO05D000008 2.8e-07 60.1 104 36.5
Phvul.001G134100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.8e-07 60.1 95 33.7
RcHm_v2.0_Chr2g0116281 Rosa chinensis HOM05D000009 ORTHO05D000008 3.6e-07 59.7 85 37.6
Duzib212G0657 Durio zibethinus HOM05D000009 ORTHO05D000008 4.7e-07 59.3 70 44.3
FvH4_6g51610 Fragaria vesca HOM05D000009 ORTHO05D000008 4.7e-07 59.3 80 40.0
FAN26G0027 Fragaria x ananassa HOM05D022962 ORTHO05D012472 4.7e-07 59.3 83 39.8
TPR.G26700 Trifolium pratense HOM05D022962 ORTHO05D012472 4.7e-07 59.3 73 39.7
Ca_18293_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 6.2e-07 58.9 105 35.2
Cc00_g11560 Coffea canephora HOM05D000009 ORTHO05D000008 6.2e-07 58.9 118 38.1
Migut.A00566 Erythranthe guttata HOM05D000009 ORTHO05D000008 6.2e-07 58.9 96 34.4
Duzib128G1111 Durio zibethinus HOM05D000009 ORTHO05D000008 8.1e-07 58.5 98 43.9
Duzib212G0006 Durio zibethinus HOM05D000009 ORTHO05D000008 8.1e-07 58.5 70 44.3
Eucgr.K01864 Eucalyptus grandis HOM05D000009 ORTHO05D000008 8.1e-07 58.5 96 36.5
Lj5C663T4 Lonicera japonica HOM05D000009 ORTHO05D000008 8.1e-07 58.5 87 39.1
TPR.G25167 Trifolium pratense HOM05D000009 ORTHO05D012472 8.1e-07 58.5 107 37.4
Haze_19834 Corylus avellana HOM05D000009 ORTHO05D000008 1.1e-06 58.2 93 40.9
Eucgr.E03806 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.1e-06 58.2 109 32.1
FvH4_1g23030 Fragaria vesca HOM05D000009 ORTHO05D000008 1.1e-06 58.2 80 38.8
QL11p012087 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-06 58.2 71 45.1
FAN14G2592 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.4e-06 57.8 80 38.8
FAN27G1609 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.4e-06 57.8 82 40.2
FAN27G1789 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.4e-06 57.8 82 40.2
TPR.G10308 Trifolium pratense HOM05D000009 ORTHO05D012472 1.4e-06 57.8 125 32.8
CANSAT80G0295 Cannabis sativa HOM05D000009 ORTHO05D000008 1.8e-06 57.4 88 40.9
Dinv03128 Davidia involucrata HOM05D000009 ORTHO05D000008 1.8e-06 57.4 103 42.7
Lj2A396T32 Lonicera japonica HOM05D000009 ORTHO05D003343 1.8e-06 57.4 67 50.7
Duzib212G0214 Durio zibethinus HOM05D000009 ORTHO05D000008 2.4e-06 57.0 70 45.7
MD05G1243400 Malus domestica HOM05D000009 ORTHO05D000008 2.4e-06 57.0 89 36.0
Prupe.6G243700 Prunus persica HOM05D000009 ORTHO05D000008 2.4e-06 57.0 89 36.0
Duzib212G0829 Durio zibethinus HOM05D000009 ORTHO05D010993 3.1e-06 56.6 61 50.8
Medtr6g052760 Medicago truncatula HOM05D000009 ORTHO05D000008 3.1e-06 56.6 144 31.2
Phvul.002G129900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.1e-06 56.6 83 41.0
RhsimUnG0090600 Rhododendron simsii HOM05D000009 ORTHO05D000008 3.1e-06 56.6 108 35.2
RcHm_v2.0_Chr2g0116651 Rosa chinensis HOM05D000009 ORTHO05D000008 3.1e-06 56.6 99 37.4
RcHm_v2.0_Chr2g0117671 Rosa chinensis HOM05D000009 ORTHO05D003343 3.1e-06 56.6 85 35.3
Ca_08437_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 4.0e-06 56.2 100 35.0
MBI09_g40720_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D000008 4.0e-06 56.2 102 40.2
Oeu061561.1 Olea europaea HOM05D000009 ORTHO05D000008 4.0e-06 56.2 106 35.8
RcHm_v2.0_Chr2g0116981 Rosa chinensis HOM05D000009 ORTHO05D000008 4.0e-06 56.2 100 38.0
MBI09_g47831_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D000008 5.2e-06 55.8 102 40.2
Medtr1g047870 Medicago truncatula HOM05D000009 ORTHO05D000008 5.2e-06 55.8 91 39.6
Medtr5g037460 Medicago truncatula HOM05D000009 ORTHO05D000008 5.2e-06 55.8 102 34.3
Phvul.001G133101 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.8e-06 55.5 83 36.1
Thecc.05G219600 Theobroma cacao HOM05D000009 ORTHO05D000008 6.8e-06 55.5 98 41.8
Os02g0150600 Oryza sativa ssp. japonica HOM05D000009 ORTHO05D012472 8.9e-06 55.1 94 34.0
QL07p000724 Quercus lobata HOM05D000009 ORTHO05D000008 8.9e-06 55.1 75 46.7
RcHm_v2.0_Chr1g0350501 Rosa chinensis HOM05D000009 ORTHO05D000008 8.9e-06 55.1 73 38.4
VMungo0720G1666 Vigna mungo HOM05D000009 ORTHO05D000008 8.9e-06 55.1 83 42.2


User provided reference genes

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