Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.1e-93 346.7 182 100.0
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 4.3e-53 211.8 200 64.0
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 2.9e-49 199.1 196 60.7
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 1.1e-48 197.2 200 60.0
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 9.2e-48 194.1 193 59.1
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 2.3e-46 189.5 199 55.8
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 2.3e-46 189.5 200 55.5
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 6.6e-46 188.0 200 55.5
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 2.5e-45 186.0 198 56.6
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 3.3e-45 185.7 199 56.8
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 3.3e-45 185.7 197 56.3
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 7.3e-45 184.5 195 55.9
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 1.6e-44 183.3 198 55.6
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 1.6e-44 183.3 198 55.6
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 1.6e-44 183.3 198 55.6
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 2.8e-44 182.6 196 56.6
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 3.6e-44 182.2 197 55.8
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 4.7e-44 181.8 193 55.4
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 1.1e-43 180.6 192 54.2
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 4.0e-43 178.7 202 55.4
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 4.0e-43 178.7 191 55.5
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 4.0e-43 178.7 191 55.5
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 5.2e-43 178.3 198 54.0
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 6.8e-43 177.9 199 54.3
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 8.9e-43 177.6 191 55.0
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 8.9e-43 177.6 194 56.2
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 1.2e-42 177.2 202 55.0
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.5e-42 176.8 199 54.8
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.5e-42 176.8 191 55.0
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 3.4e-42 175.6 202 55.0
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 5.8e-42 174.9 192 55.7
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 5.8e-42 174.9 192 56.2
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 5.8e-42 174.9 190 54.7
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 9.8e-42 174.1 202 54.5
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 1.3e-41 173.7 194 54.6
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 1.3e-41 173.7 192 55.7
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 1.7e-41 173.3 200 55.0
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 2.2e-41 172.9 191 53.9
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 2.9e-41 172.6 203 54.2
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 3.7e-41 172.2 192 54.2
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 4.9e-41 171.8 203 54.2
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 4.9e-41 171.8 192 55.2
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 4.9e-41 171.8 197 53.8
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 6.4e-41 171.4 196 55.1
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 8.3e-41 171.0 204 53.9
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 8.3e-41 171.0 196 54.6
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 8.3e-41 171.0 196 54.6
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 1.1e-40 170.6 192 51.6
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 1.1e-40 170.6 191 53.9
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 1.4e-40 170.2 200 54.0
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.4e-40 170.2 196 54.6
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 2.4e-40 169.5 203 53.7
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 2.4e-40 169.5 196 53.6
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 2.4e-40 169.5 190 53.2
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 3.2e-40 169.1 200 54.0
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 3.2e-40 169.1 196 53.6
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 4.1e-40 168.7 200 53.5
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 4.1e-40 168.7 189 55.0
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 4.1e-40 168.7 189 55.0
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 4.1e-40 168.7 192 52.6
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 5.4e-40 168.3 196 53.6
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 5.4e-40 168.3 200 53.5
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 5.4e-40 168.3 198 54.5
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 7.1e-40 167.9 194 51.0
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 7.1e-40 167.9 196 54.1
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 9.2e-40 167.5 203 53.7
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 9.2e-40 167.5 195 54.9
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 1.6e-39 166.8 189 52.9
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 1.6e-39 166.8 191 53.9
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 1.6e-39 166.8 200 53.5
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 2.7e-39 166.0 194 52.6
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 3.5e-39 165.6 202 52.0
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 3.5e-39 165.6 197 53.8
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 3.5e-39 165.6 195 53.3
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 3.5e-39 165.6 200 53.5
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 4.6e-39 165.2 191 55.0
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 4.6e-39 165.2 191 55.0
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 4.6e-39 165.2 191 55.0
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 4.6e-39 165.2 194 52.1
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 4.6e-39 165.2 200 48.5
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 6.0e-39 164.9 196 54.1
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 7.8e-39 164.5 192 54.2
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 7.8e-39 164.5 191 55.0
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.0e-38 164.1 196 53.1
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.7e-38 163.3 194 50.0
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.7e-38 163.3 194 49.5
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 2.3e-38 162.9 192 54.7
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 2.3e-38 162.9 192 50.5
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 3.0e-38 162.5 191 53.9
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 3.9e-38 162.2 191 53.9
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 3.9e-38 162.2 191 53.4
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 5.1e-38 161.8 189 53.4
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 1.1e-37 160.6 196 51.0
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 3.3e-37 159.1 177 55.9
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 4.3e-37 158.7 190 53.2
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 9.5e-37 157.5 202 48.0
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 4.7e-36 155.2 191 52.4
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 6.2e-36 154.8 186 50.5
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 1.8e-35 153.3 182 51.1
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 5.2e-35 151.8 196 49.0
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 6.8e-35 151.4 194 50.5
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 1.5e-34 150.2 184 48.4
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 2.2e-33 146.4 132 62.1
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 4.9e-33 145.2 179 52.0
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 6.4e-33 144.8 209 47.4
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 1.9e-32 143.3 192 49.0
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 5.4e-32 141.7 207 47.8
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 9.2e-32 141.0 195 44.6
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 2.1e-31 139.8 197 50.3
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 1.3e-30 137.1 127 60.6
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 1.3e-30 137.1 211 45.0
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 3.9e-30 135.6 187 46.5
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 1.9e-29 133.3 186 50.5
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 7.3e-29 131.3 188 43.1
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 1.6e-28 130.2 133 57.1
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 2.9e-25 119.4 101 60.4
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 8.4e-25 117.9 108 58.3
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 1.9e-21 106.7 112 53.6
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 1.3e-20 104.0 88 62.5
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 2.8e-20 102.8 127 51.2
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 3.4e-18 95.9 89 57.3
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 4.9e-17 92.0 88 56.8
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 3.5e-15 85.9 88 52.3
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 1.9e-13 80.1 168 31.5
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 2.5e-13 79.7 104 47.1
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 1.1e-11 74.3 75 56.0
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 1.2e-07 60.8 85 50.6
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 2.3e-06 56.6 68 45.6


User provided reference genes

Program Settings