Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 7.2e-242 840.1 410 100.0
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 2.4e-189 665.6 422 77.5
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 8.4e-182 640.6 430 74.0
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 7.1e-181 637.5 435 73.8
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 4.4e-175 618.2 418 71.5
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.4e-173 613.2 365 84.1
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.0e-167 592.8 364 75.8
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 3.4e-167 592.0 400 70.8
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 7.6e-167 590.9 410 68.8
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 2.9e-166 589.0 423 67.4
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 7.1e-165 584.3 399 70.2
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 9.3e-165 583.9 423 67.6
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.5e-164 582.0 366 81.1
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.0e-163 580.5 399 67.7
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 1.3e-163 580.1 397 70.0
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.3e-163 580.1 400 70.0
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 2.5e-162 575.9 441 65.8
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.6e-161 573.2 399 68.7
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.6e-161 573.2 401 67.6
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 2.1e-161 572.8 394 70.6
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 4.8e-161 571.6 412 68.4
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.8e-160 569.7 434 65.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.8e-160 569.7 384 71.4
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.0e-160 568.5 400 68.2
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.9e-160 567.8 400 68.2
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 9.0e-160 567.4 400 68.5
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 1.5e-159 566.6 400 68.0
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 5.8e-159 564.7 420 66.4
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.3e-158 563.5 400 69.0
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 3.8e-158 562.0 420 66.7
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 4.9e-158 561.6 401 68.6
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 8.4e-158 560.8 405 66.7
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 1.9e-157 559.7 400 68.2
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 1.9e-157 559.7 414 65.2
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.6e-156 556.6 397 66.8
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 2.7e-156 555.8 420 66.0
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 2.3e-155 552.7 428 63.6
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 3.3e-154 548.9 399 65.9
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-153 547.0 371 75.7
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 4.8e-153 545.0 403 65.0
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 6.2e-153 544.7 399 66.4
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 3.1e-152 542.3 397 65.5
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 5.3e-152 541.6 401 64.8
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 3.4e-151 538.9 400 65.2
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 4.5e-151 538.5 401 63.8
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 1.0e-150 537.3 431 61.7
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 1.7e-150 536.6 412 63.1
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.4e-149 533.5 399 63.7
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 2.5e-149 532.7 399 66.4
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.2e-149 532.3 417 62.8
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 9.3e-149 530.8 390 63.6
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 9.3e-149 530.8 430 61.2
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 9.3e-149 530.8 398 64.1
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 9.3e-149 530.8 400 63.5
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 2.1e-148 529.6 400 65.2
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 6.7e-147 524.6 400 63.2
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 6.7e-147 524.6 425 61.4
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 1.1e-146 523.9 408 62.0
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.5e-146 523.5 401 63.6
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.5e-146 523.5 400 61.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 2.5e-146 522.7 393 64.1
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.3e-146 522.3 429 59.4
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 5.7e-146 521.5 415 60.5
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 3.1e-144 515.8 421 60.1
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 5.3e-144 515.0 399 62.4
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.5e-143 513.5 399 61.9
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.5e-143 513.5 423 59.8
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 2.6e-143 512.7 423 59.8
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 4.5e-143 511.9 423 59.6
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 7.7e-143 511.1 422 59.7
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.2e-140 503.8 425 59.5
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 2.7e-140 502.7 400 59.5
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 3.6e-140 502.3 410 59.5
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.3e-137 493.8 418 57.7
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.1e-133 480.7 423 57.9
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 5.5e-133 478.4 403 59.8
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.1e-132 476.5 409 58.4
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 7.7e-127 458.0 399 58.1
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 5.0e-126 455.3 400 58.8
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.5e-125 453.8 396 56.8
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 3.0e-123 446.0 399 56.9
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 2.0e-122 443.4 306 70.6
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 3.1e-120 436.0 331 67.1
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 2.9e-118 429.5 419 50.8
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 4.2e-117 425.6 394 53.6
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 1.6e-116 423.7 430 50.0
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 2.3e-115 419.9 334 60.5
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 1.1e-112 411.0 419 50.1
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 5.4e-112 408.7 346 59.5
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 2.9e-110 402.9 313 62.6
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 8.0e-100 368.2 308 59.4
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 3.0e-99 366.3 314 57.0
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 3.4e-98 362.8 412 46.1
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 1.7e-97 360.5 239 71.5
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 5.8e-90 335.5 201 76.6
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 6.8e-75 285.4 187 73.3
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 2.4e-67 260.4 164 74.4
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.2e-66 258.1 224 59.8
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.2e-65 253.8 137 89.8
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.9e-65 253.4 130 93.8
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 2.4e-59 233.8 163 67.5
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.4e-50 203.4 140 75.0
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.4e-50 203.4 140 75.0
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 3.3e-45 186.8 383 32.4
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 2.8e-44 183.7 135 65.2
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 2.7e-39 167.2 190 49.5
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 5.7e-37 159.5 101 76.2
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 7.9e-31 139.0 189 40.2
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 3.2e-24 117.1 77 72.7
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 2.5e-21 107.5 63 73.0
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 4.7e-15 86.7 195 32.3
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 4.4e-13 80.1 237 27.8
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 5.7e-13 79.7 199 30.2
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.1e-11 75.5 65 60.0
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 9.1e-11 72.4 249 26.5
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 2.0e-10 71.2 75 44.0
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 2.3e-06 57.8 77 39.0


User provided reference genes

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