Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 3.2e-179 631.7 335 100.0
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 2.6e-112 409.5 488 51.4
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 7.7e-109 397.9 412 52.7
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.9e-108 396.0 319 67.7
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 8.5e-108 394.4 426 53.3
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 8.5e-108 394.4 367 58.6
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 3.6e-106 389.0 372 57.0
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 3.6e-106 389.0 364 57.7
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 6.1e-106 388.3 372 57.0
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 6.1e-106 388.3 376 56.9
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 6.1e-106 388.3 377 57.3
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 8.0e-106 387.9 400 54.0
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 3.0e-105 386.0 412 53.4
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 3.0e-105 386.0 368 55.7
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 2.0e-104 383.3 418 51.9
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.6e-104 382.9 368 54.1
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.7e-104 381.7 364 56.9
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 7.5e-104 381.3 374 56.4
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 9.8e-104 380.9 364 55.8
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.3e-103 380.6 364 55.8
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.2e-103 379.8 393 53.2
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 2.2e-103 379.8 393 53.2
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 6.3e-103 378.3 381 54.1
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.8e-102 376.7 393 52.4
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.4e-102 376.3 370 55.7
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.1e-102 375.9 427 50.1
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 5.4e-102 375.2 412 53.2
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.6e-101 373.6 419 50.8
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 2.0e-101 373.2 368 54.3
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.0e-101 373.2 395 54.7
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 3.5e-101 372.5 361 56.8
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.1e-99 367.5 416 51.4
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.5e-99 366.3 372 52.7
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 7.2e-99 364.8 368 54.1
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 2.8e-98 362.8 363 54.8
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 8.0e-98 361.3 372 52.4
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.0e-97 360.9 370 53.5
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.0e-97 360.9 363 54.5
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 2.3e-97 359.8 368 53.5
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 2.3e-97 359.8 366 53.6
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 3.0e-97 359.4 415 50.6
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.0e-96 356.7 363 56.5
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 2.0e-96 356.7 347 55.6
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 2.6e-96 356.3 413 49.2
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 3.4e-96 355.9 371 52.3
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.4e-96 355.9 462 47.4
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 7.5e-96 354.8 365 53.2
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.7e-95 353.6 372 53.5
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 3.7e-95 352.4 366 52.5
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 4.9e-95 352.1 365 52.6
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 8.3e-95 351.3 403 50.1
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 2.4e-94 349.7 396 49.7
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 3.1e-94 349.4 369 52.0
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 9.2e-94 347.8 342 54.1
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 9.2e-94 347.8 403 50.1
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 1.6e-93 347.1 403 51.9
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.7e-93 346.3 365 51.2
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 7.8e-93 344.7 379 50.1
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 7.8e-93 344.7 369 50.9
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.0e-92 344.4 194 87.6
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.3e-92 344.0 369 51.2
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 2.9e-92 342.8 336 54.8
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 2.9e-92 342.8 398 49.0
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 2.9e-92 342.8 369 50.9
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 8.6e-92 341.3 379 51.2
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 2.5e-91 339.7 364 50.3
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 4.3e-91 339.0 366 51.6
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 5.6e-91 338.6 369 50.7
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 7.3e-91 338.2 364 50.3
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 1.6e-90 337.0 364 50.3
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 3.6e-90 335.9 414 47.6
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.0e-89 334.3 367 49.0
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.3e-89 333.2 346 53.2
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.5e-88 330.5 369 48.0
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 9.8e-88 327.8 253 69.6
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.8e-86 323.6 366 51.9
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 2.0e-85 320.1 348 50.3
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 4.6e-85 318.9 362 50.3
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.3e-83 312.8 399 46.9
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.2e-82 310.8 190 77.9
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 2.8e-82 309.7 330 50.9
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 3.4e-80 302.8 353 47.9
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 3.4e-80 302.8 363 46.0
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.9e-79 298.9 425 44.9
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 5.6e-75 285.4 511 37.4
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.3e-68 263.5 244 55.7
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.5e-67 260.8 358 42.2
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 3.6e-66 256.1 321 48.6
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.1e-65 254.6 358 40.2
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.9e-59 233.8 326 40.8
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 6.9e-57 225.3 358 36.9
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 5.8e-56 222.2 128 81.2
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.0e-52 209.9 130 73.8
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 5.1e-52 209.1 345 37.1
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-50 204.5 300 40.3
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 7.6e-40 168.7 133 63.2
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 5.5e-38 162.5 108 71.3
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 3.3e-35 153.3 234 40.6
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 4.3e-35 152.9 234 40.2
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 4.0e-33 146.4 191 42.4
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 7.6e-32 142.1 286 33.6
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.5e-27 127.1 120 57.5
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 4.1e-25 119.8 128 50.8
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 1.7e-23 114.4 63 79.4
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 5.1e-20 102.8 78 65.4
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 5.3e-17 92.8 179 35.2
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 6.9e-17 92.4 61 68.9
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 9.1e-17 92.0 167 36.5
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 5.0e-15 86.3 56 71.4
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 3.6e-13 80.1 51 74.5
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.0e-12 78.6 122 44.3
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 3.7e-10 70.1 144 32.6
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 5.0e-07 59.7 95 41.1
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 1.1e-06 58.5 34 67.6


User provided reference genes

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