Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 1.6e-38 162.5 97 100.0
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 6.9e-26 120.6 80 81.2
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 1.2e-25 119.8 78 80.8
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 7.1e-23 110.5 80 71.2
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 2.1e-22 109.0 79 69.6
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 2.7e-22 108.6 79 74.7
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 2.7e-22 108.6 79 69.6
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 7.9e-22 107.1 78 75.6
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 3.9e-21 104.8 78 71.8
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 5.1e-21 104.4 72 72.2
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 5.1e-21 104.4 81 71.6
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 8.7e-21 103.6 80 70.0
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 8.7e-21 103.6 72 76.4
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 8.7e-21 103.6 77 72.7
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 1.9e-20 102.4 75 68.0
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 2.5e-20 102.1 78 66.7
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 3.3e-20 101.7 81 69.1
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 3.3e-20 101.7 79 65.8
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 9.6e-20 100.1 68 75.0
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 1.3e-19 99.8 76 68.4
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 1.3e-19 99.8 78 67.9
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 1.6e-19 99.4 80 63.8
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 1.6e-19 99.4 80 66.2
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 2.1e-19 99.0 79 67.1
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 2.1e-19 99.0 79 63.3
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 2.8e-19 98.6 68 77.9
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 2.8e-19 98.6 68 77.9
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 3.7e-19 98.2 78 64.1
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 4.8e-19 97.8 79 65.8
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 8.2e-19 97.1 73 71.2
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 8.2e-19 97.1 79 65.8
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 8.2e-19 97.1 67 74.6
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 1.1e-18 96.7 81 67.9
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 1.1e-18 96.7 79 65.8
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 1.8e-18 95.9 78 65.4
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 2.4e-18 95.5 78 65.4
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 3.1e-18 95.1 70 74.3
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 4.0e-18 94.7 78 62.8
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 4.0e-18 94.7 78 64.1
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 5.3e-18 94.4 79 64.6
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 5.3e-18 94.4 78 67.9
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 5.3e-18 94.4 80 63.8
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 6.9e-18 94.0 79 64.6
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 9.0e-18 93.6 82 59.8
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 9.0e-18 93.6 78 61.5
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 9.0e-18 93.6 75 66.7
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 1.2e-17 93.2 78 66.7
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 1.2e-17 93.2 71 64.8
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 1.2e-17 93.2 79 60.8
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 2.0e-17 92.4 80 66.2
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 2.0e-17 92.4 73 67.1
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 2.0e-17 92.4 75 68.0
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 2.0e-17 92.4 74 60.8
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 2.6e-17 92.0 68 75.0
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 4.5e-17 91.3 69 69.6
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 7.6e-17 90.5 77 66.2
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.3e-16 89.7 86 57.0
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 1.7e-16 89.4 71 66.2
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 2.9e-16 88.6 76 71.1
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 1.9e-15 85.9 72 63.9
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 1.9e-15 85.9 72 63.9
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 7.1e-15 84.0 78 60.3
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 1.2e-14 83.2 77 57.1
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 2.1e-14 82.4 80 62.5
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 2.1e-14 82.4 51 76.5
Zm00001eb227210 Zea mays HOM05D008117 ORTHO05D010265 5.1e-13 77.8 64 62.5
Zm00001eb243570 Zea mays HOM05D008117 ORTHO05D010265 8.7e-13 77.0 64 60.9
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 8.2e-11 70.5 69 59.4
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 1.8e-10 69.3 50 64.0
AagrBONN_evm.TU.Sc2ySwM_117.1449 Anthoceros agrestis HOM05D008117 ORTHO05D010265 6.9e-10 67.4 62 54.8
SEGI_19848 Sequoiadendron giganteum HOM05D008117 ORTHO05D010265 1.4e-07 59.7 61 55.7
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 2.7e-06 55.5 60 56.7


User provided reference genes

Program Settings