Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.5e-195 685.3 353 100.0
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.7e-186 654.8 409 85.6
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.1e-129 467.2 343 74.9
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.9e-129 466.5 343 74.9
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.7e-59 233.4 478 38.9
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 2.4e-52 210.3 371 41.0
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.2e-40 171.4 384 37.0
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 4.7e-40 169.5 412 35.2
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 1.2e-38 164.9 410 35.1
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 4.9e-37 159.5 427 34.2
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 2.4e-36 157.1 441 32.4
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 4.1e-36 156.4 430 33.3
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 1.6e-35 154.5 415 35.2
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 6.0e-35 152.5 381 34.4
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 6.0e-35 152.5 406 33.0
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 1.7e-34 151.0 379 33.2
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.7e-34 151.0 405 32.8
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 5.0e-34 149.4 407 33.2
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 6.6e-34 149.1 432 33.1
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 4.3e-33 146.4 380 32.9
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 5.6e-33 146.0 423 33.1
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 5.6e-33 146.0 410 33.4
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 7.3e-33 145.6 367 35.4
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 2.1e-32 144.1 371 33.4
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 3.6e-32 143.3 385 33.0
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 4.7e-32 142.9 409 32.5
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.4e-31 141.4 375 34.4
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 1.8e-31 141.0 367 35.1
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 4.0e-31 139.8 405 32.3
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 8.9e-31 138.7 357 34.5
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 1.5e-30 137.9 369 32.8
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 2.6e-30 137.1 437 32.5
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 5.8e-30 136.0 357 34.2
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 7.5e-30 135.6 359 31.5
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 9.8e-30 135.2 421 32.5
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.7e-29 134.4 384 32.8
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.9e-29 133.7 428 31.3
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.7e-29 133.3 434 31.3
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.9e-28 131.0 416 30.8
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 4.1e-28 129.8 388 33.2
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.6e-27 127.9 410 31.2
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 4.6e-27 126.3 397 31.5
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 6.0e-27 125.9 357 31.1
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.3e-26 124.8 390 31.8
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.7e-26 124.4 387 31.5
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 2.3e-26 124.0 408 29.4
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 8.6e-26 122.1 379 30.9
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 8.6e-26 122.1 366 30.1
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 1.1e-25 121.7 421 28.7
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 1.5e-25 121.3 359 34.0
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 2.5e-25 120.6 355 33.8
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 2.5e-25 120.6 355 33.8
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 3.3e-25 120.2 431 29.0
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 1.6e-24 117.9 433 29.1
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.8e-24 117.1 321 37.1
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.8e-24 117.1 384 31.2
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 6.2e-24 115.9 430 29.1
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 8.1e-24 115.5 416 28.8
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.4e-23 114.8 291 33.0
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 1.4e-23 114.8 193 39.4
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.8e-23 114.4 313 31.3
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 2.3e-23 114.0 191 38.2
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 1.2e-22 111.7 400 30.5
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 2.0e-22 110.9 288 34.0
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 4.4e-22 109.8 197 42.1
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 7.5e-22 109.0 406 26.8
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 9.9e-22 108.6 417 28.1
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 1.3e-21 108.2 196 41.8
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 1.3e-21 108.2 299 32.4
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 3.7e-21 106.7 312 31.7
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 3.7e-21 106.7 315 31.7
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 3.7e-21 106.7 407 28.0
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 6.4e-21 105.9 375 28.8
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 8.3e-21 105.5 423 26.5
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 1.1e-20 105.1 286 33.6
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 1.4e-20 104.8 283 33.6
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.9e-20 104.4 280 33.9
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 2.4e-20 104.0 418 29.4
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 5.4e-20 102.8 301 31.6
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 7.1e-20 102.4 200 37.0
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.2e-19 101.7 415 28.4
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.6e-19 101.3 412 28.9
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 1.6e-19 101.3 301 33.6
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.7e-19 100.5 406 28.6
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 4.6e-19 99.8 416 27.6
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 6.0e-19 99.4 351 27.1
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 6.0e-19 99.4 312 31.4
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 7.8e-19 99.0 302 32.8
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 7.8e-19 99.0 274 32.8
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.0e-18 98.6 299 31.8
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 1.0e-18 98.6 438 30.1
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 1.3e-18 98.2 395 28.1
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.3e-18 98.2 286 32.5
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.3e-18 98.2 294 32.0
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 1.7e-18 97.8 281 33.1
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 2.3e-18 97.4 302 34.1
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.3e-18 97.4 365 29.0
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 8.6e-18 95.5 416 28.6
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 8.6e-18 95.5 308 31.8
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 1.1e-17 95.1 347 26.8
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 1.5e-17 94.7 354 29.7
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.9e-17 94.4 330 30.0
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.9e-17 94.4 195 35.9
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 1.9e-17 94.4 386 30.6
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 1.9e-17 94.4 380 27.1
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.5e-17 94.0 195 35.4
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 5.6e-17 92.8 418 30.4
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 7.3e-17 92.4 418 30.4
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 7.3e-17 92.4 214 34.6
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 7.3e-17 92.4 414 27.1
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 9.5e-17 92.0 285 31.6
Actinidia20741 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.2e-16 91.7 280 33.6
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 1.6e-16 91.3 398 28.1
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 4.7e-16 89.7 370 28.1
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 6.2e-16 89.4 420 26.4
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 8.1e-16 89.0 363 28.4
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 1.1e-15 88.6 414 27.8
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 1.4e-15 88.2 292 31.2
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 1.4e-15 88.2 284 31.3
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.4e-15 87.4 423 26.7
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 2.4e-15 87.4 411 26.5
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 3.1e-15 87.0 395 25.3
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 5.2e-15 86.3 126 42.1
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 5.2e-15 86.3 400 25.8
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 5.2e-15 86.3 367 26.7
Thhalv10016075m.g Eutrema salsugineum HOM05D013727 ORTHO05D003520 6.8e-15 85.9 436 25.9
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 8.9e-15 85.5 244 30.7
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 8.9e-15 85.5 407 27.8
BolC2t06018H Brassica oleracea HOM05D013727 ORTHO05D003520 1.2e-14 85.1 172 37.8
CSS0008692 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.2e-14 85.1 57 80.7
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 1.2e-14 85.1 308 28.9
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 1.5e-14 84.7 144 42.4
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 1.5e-14 84.7 133 44.4
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.5e-14 84.7 141 41.8
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.5e-14 84.7 300 29.7
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 2.0e-14 84.3 285 31.2
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 2.0e-14 84.3 308 30.8
AL6G10750 Arabidopsis lyrata HOM05D013727 ORTHO05D003520 3.4e-14 83.6 450 25.8
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 3.4e-14 83.6 284 31.3
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 4.4e-14 83.2 206 33.0
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 4.4e-14 83.2 291 30.9
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 4.4e-14 83.2 287 27.5
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 5.8e-14 82.8 377 26.5
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 9.9e-14 82.0 285 30.9
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 2.2e-13 80.9 154 33.8
Carub.0006s0045 Capsella rubella HOM05D013727 ORTHO05D003520 3.8e-13 80.1 431 25.8
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 6.4e-13 79.3 367 27.0
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 6.4e-13 79.3 302 31.1
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 8.4e-13 79.0 304 31.6
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 1.4e-12 78.2 306 30.7
AT5G01370 Arabidopsis thaliana HOM05D013727 ORTHO05D003520 1.9e-12 77.8 430 26.0
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 2.4e-12 77.4 294 31.3
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 5.4e-12 76.3 295 30.2
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 5.4e-12 76.3 311 27.7
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 7.1e-12 75.9 278 29.5
Sp6g20330 Schrenkiella parvula HOM05D011448 ORTHO05D003520 9.2e-12 75.5 361 29.1
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 1.6e-11 74.7 292 27.7
Thhalv10015324m.g Eutrema salsugineum HOM05D011448 ORTHO05D003520 7.8e-11 72.4 399 27.8
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 7.8e-11 72.4 298 30.2
Aa31LG1G23030 Aethionema arabicum HOM05D013727 ORTHO05D003520 1.0e-10 72.0 412 24.8
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.0e-10 72.0 383 25.3
Sp6g40680 Schrenkiella parvula HOM05D013727 ORTHO05D003520 3.0e-10 70.5 154 34.4
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 3.9e-10 70.1 304 29.3
BraA02t04692Z Brassica rapa HOM05D013727 ORTHO05D003520 1.5e-09 68.2 145 35.2
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 1.9e-09 67.8 361 26.6
AT5G58630 Arabidopsis thaliana HOM05D011448 ORTHO05D003520 4.3e-09 66.6 380 25.0
CARHR211750 Cardamine hirsuta HOM05D013727 ORTHO05D003520 9.6e-09 65.5 435 24.4
AL8G34900 Arabidopsis lyrata HOM05D011448 ORTHO05D003520 1.6e-08 64.7 186 29.0
arahy.Tifrunner.gnm1.ann1.71KX3G Arachis hypogaea HOM05D003726 ORTHO05D003520 2.1e-08 64.3 219 32.0
Hund11000 Selenicereus undatus HOM05D046068 ORTHO05D003520 2.1e-08 64.3 210 33.8
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 2.8e-08 63.9 319 28.2
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 4.7e-08 63.2 369 26.6
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 6.2e-08 62.8 413 24.0
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 8.1e-08 62.4 315 28.6
Hund29902 Selenicereus undatus HOM05D046068 ORTHO05D003520 1.4e-07 61.6 210 33.3
arahy.Tifrunner.gnm1.ann1.142K7L Arachis hypogaea HOM05D003726 ORTHO05D003520 2.4e-07 60.8 217 31.3
Hund14289 Selenicereus undatus HOM05D029928 ORTHO05D003520 5.2e-07 59.7 347 25.4
BcaC04g19824 Brassica carinata HOM05D011448 ORTHO05D003520 4.4e-06 56.6 380 26.3
BolC9t57921H Brassica oleracea HOM05D011448 ORTHO05D003520 4.4e-06 56.6 380 26.3


User provided reference genes

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