Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024141 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 6.0e-123 444.1 215 100.0
CSS0004547 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 2.2e-96 355.9 213 84.5
CSS0023178 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 1.1e-89 333.6 213 80.3
CSS0028074 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D026295 1.8e-79 299.7 213 74.2
Rhsim09G0126700 Rhododendron simsii HOM05D005523 ORTHO05D007089 2.7e-54 216.1 203 57.6
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 4.7e-51 205.3 245 49.8
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 6.2e-51 204.9 237 49.4
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 1.1e-47 194.1 233 46.8
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 1.1e-47 194.1 233 46.8
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 9.2e-47 191.0 216 47.7
Lj6A778G61 Lonicera japonica HOM05D005523 ORTHO05D007089 2.0e-46 189.9 228 46.1
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 3.5e-46 189.1 216 45.8
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 7.8e-46 188.0 233 46.4
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 3.0e-45 186.0 233 45.9
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 3.0e-45 186.0 213 46.5
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 8.6e-45 184.5 194 47.9
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 2.5e-44 183.0 226 48.2
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 3.3e-44 182.6 205 47.8
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 8.1e-43 177.9 149 61.7
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 2.3e-42 176.4 202 48.0
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 3.1e-42 176.0 231 43.7
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 5.2e-42 175.3 206 46.6
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 6.8e-42 174.9 219 41.6
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 6.8e-42 174.9 223 46.2
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 1.2e-41 174.1 223 46.2
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 1.2e-41 174.1 258 39.1
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 2.0e-41 173.3 209 47.8
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 4.4e-41 172.2 205 44.9
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 1.3e-40 170.6 199 49.2
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 1.7e-40 170.2 230 41.3
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 1.7e-40 170.2 229 44.5
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 4.9e-40 168.7 207 47.8
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 6.4e-40 168.3 196 47.4
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 8.3e-40 167.9 231 40.3
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 8.3e-40 167.9 211 46.0
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 1.1e-39 167.5 194 47.9
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 1.1e-39 167.5 209 46.4
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 1.4e-39 167.2 204 47.1
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 1.9e-39 166.8 186 50.0
Oeu021804.1 Olea europaea HOM05D005523 ORTHO05D007089 1.9e-39 166.8 186 50.0
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 4.1e-39 165.6 203 49.3
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.2e-38 164.1 194 48.5
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 1.2e-38 164.1 231 39.4
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 1.2e-38 164.1 215 43.7
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 1.6e-38 163.7 210 45.7
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 2.7e-38 162.9 110 69.1
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 2.7e-38 162.9 201 43.3
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 3.5e-38 162.5 223 42.2
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 3.5e-38 162.5 199 45.7
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 3.5e-38 162.5 189 47.6
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 7.8e-38 161.4 210 43.3
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 1.0e-37 161.0 209 45.0
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 1.7e-37 160.2 205 43.4
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 2.3e-37 159.8 201 44.3
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 3.0e-37 159.5 201 44.8
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 3.0e-37 159.5 223 41.7
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 3.9e-37 159.1 194 47.4
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 3.9e-37 159.1 194 46.4
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 3.9e-37 159.1 169 51.5
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 5.1e-37 158.7 233 44.6
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 5.1e-37 158.7 194 46.4
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 8.6e-37 157.9 204 43.1
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 8.6e-37 157.9 206 43.2
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 1.9e-36 156.8 201 45.8
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 2.5e-36 156.4 206 43.2
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 4.3e-36 155.6 215 44.2
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 2.8e-35 152.9 211 42.7
VMungo0251G1186 Vigna mungo HOM05D005523 ORTHO05D007089 2.8e-35 152.9 189 46.6
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 8.1e-35 151.4 194 44.3
ATR0177G042 Amborella trichopoda HOM05D005523 ORTHO05D007089 1.4e-34 150.6 117 59.8
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 2.3e-34 149.8 222 38.7
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 3.1e-34 149.4 224 40.6
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 1.2e-33 147.5 212 42.0
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 5.8e-33 145.2 201 44.3
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 5.8e-33 145.2 228 38.2
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 9.9e-33 144.4 195 42.1
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 9.9e-33 144.4 215 39.5
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 1.3e-32 144.1 223 39.0
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 1.3e-32 144.1 235 40.0
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 4.9e-32 142.1 112 63.4
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 2.4e-31 139.8 211 36.0
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 2.4e-31 139.8 204 37.7
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 5.4e-31 138.7 201 39.3
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 5.4e-31 138.7 201 39.3
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 7.1e-31 138.3 215 38.1
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 2.1e-30 136.7 202 39.1
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 2.7e-30 136.3 269 34.9
CDE10G0400 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 4.6e-30 135.6 110 60.9
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 2.3e-29 133.3 198 39.4
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 3.0e-29 132.9 202 38.6
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 3.9e-29 132.5 105 59.0
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 5.1e-29 132.1 196 38.8
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 1.5e-28 130.6 196 38.8
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 4.7e-27 125.6 199 37.7
SEGI_10872 Sequoiadendron giganteum HOM05D005523 ORTHO05D007089 8.1e-27 124.8 107 55.1
Cpa.g.sc1.132 Carica papaya HOM05D005523 ORTHO05D007089 3.1e-26 122.9 186 39.2
ClCG05G023660 Citrullus lanatus HOM05D005523 ORTHO05D007089 3.4e-25 119.4 218 37.6
AagrBONN_evm.TU.Sc2ySwM_228.676 Anthoceros agrestis HOM05D005523 ORTHO05D007089 5.8e-25 118.6 105 56.2
SMO364G0955 Selaginella moellendorffii HOM05D005523 ORTHO05D007089 3.8e-24 115.9 191 39.8
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 4.6e-22 109.0 111 46.8
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 6.0e-22 108.6 117 43.6
TAR374G1311 Trochodendron aralioides HOM05D005523 ORTHO05D007089 1.4e-18 97.4 186 36.0
Actinidia12916 Actinidia chinensis HOM05D005523 ORTHO05D007089 1.8e-18 97.1 177 40.1
Os12g0574900 Oryza sativa ssp. japonica HOM05D005523 ORTHO05D007089 8.4e-16 88.2 161 34.8
Cre07.g321050 Chlamydomonas reinhardtii HOM05D005523 ORTHO05D007089 2.1e-14 83.6 100 40.0
CiPaw.04G124200 Carya illinoinensis HOM05D005523 ORTHO05D007089 7.4e-12 75.1 71 52.1
Eucgr.G02442 Eucalyptus grandis HOM05D005523 ORTHO05D007089 1.1e-10 71.2 46 71.7
PRCOL_00003408 Prasinoderma coloniale HOM05D005523 ORTHO05D007089 6.9e-10 68.6 149 30.2
HanXRQChr15g0470871 Helianthus annuus HOM05D005523 ORTHO05D007089 7.6e-09 65.1 45 62.2
Mapoly0013s0146 Marchantia polymorpha HOM05D005523 ORTHO05D007089 9.9e-09 64.7 38 76.3
Actinidia28650 Actinidia chinensis HOM05D005523 ORTHO05D007089 7.1e-07 58.5 61 50.8
Actinidia36736 Actinidia chinensis HOM05D005523 ORTHO05D026295 7.1e-07 58.5 61 50.8
Actinidia11693 Actinidia chinensis HOM05D005523 ORTHO05D026295 9.3e-07 58.2 37 67.6
CAN.G553.8 Capsicum annuum HOM05D001766 ORTHO05D043404 2.1e-06 57.0 38 65.8
Actinidia14170 Actinidia chinensis HOM05D005523 ORTHO05D026295 4.6e-06 55.8 53 52.8


User provided reference genes

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