Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024139 Camellia sinensis var. sinensis HOM05D002626 ORTHO05D002749 2.4e-92 342.4 210 100.0
CSS0049114 Camellia sinensis var. sinensis HOM05D002626 ORTHO05D002749 4.6e-75 285.0 221 72.4
CSS0035853 Camellia sinensis var. sinensis HOM05D002626 ORTHO05D002749 3.9e-74 282.0 221 71.5
Dinv44463 Davidia involucrata HOM05D002626 ORTHO05D002749 3.5e-35 152.5 196 51.5
Dinv38357 Davidia involucrata HOM05D002626 ORTHO05D002749 3.4e-30 136.0 191 47.6
Hma1.2p1_0643F.1_g194410 Hydrangea macrophylla HOM05D002626 ORTHO05D002749 3.2e-28 129.4 196 45.4
CSS0004520 Camellia sinensis var. sinensis HOM05D002626 ORTHO05D002749 9.3e-28 127.9 192 47.4
Rhsim02G0017100 Rhododendron simsii HOM05D002626 ORTHO05D002749 5.1e-26 122.1 196 45.4
TAR365G0050 Trochodendron aralioides HOM05D002626 ORTHO05D002749 5.9e-22 108.6 216 40.3
MD16G1180600 Malus domestica HOM05D002626 ORTHO05D002749 5.1e-18 95.5 190 44.7
Medtr2g021070 Medicago truncatula HOM05D002626 ORTHO05D002749 2.0e-17 93.6 207 38.2
Atru.chr5.1344 Acer truncatum HOM05D002626 ORTHO05D002749 4.3e-17 92.4 229 33.6
arahy.Tifrunner.gnm1.ann1.YGA72Z Arachis hypogaea HOM05D002626 ORTHO05D002749 4.3e-17 92.4 214 40.7
vmacro15291 Vaccinium macrocarpon HOM05D002626 ORTHO05D002749 7.4e-17 91.7 205 39.5
Lj3P805T49 Lonicera japonica HOM05D002626 ORTHO05D002749 1.7e-16 90.5 188 40.4
Lj6g0010477 Lotus japonicus HOM05D002626 ORTHO05D002749 1.7e-16 90.5 209 39.2
Prupe.1G148100 Prunus persica HOM05D002626 ORTHO05D002749 2.2e-16 90.1 202 40.6
PGR004G1768 Punica granatum HOM05D002626 ORTHO05D002749 2.2e-16 90.1 195 42.1
PGR065G0005 Punica granatum HOM05D002626 ORTHO05D002749 2.2e-16 90.1 195 42.1
Dinv11263 Davidia involucrata HOM05D002626 ORTHO05D002749 2.8e-16 89.7 206 34.5
Lalb_Chr18g0055961 Lupinus albus HOM05D002626 ORTHO05D002749 4.8e-16 89.0 202 34.2
CiPaw.02G089900 Carya illinoinensis HOM05D002626 ORTHO05D002749 8.2e-16 88.2 189 39.2
QL06p005999 Quercus lobata HOM05D002626 ORTHO05D002749 1.1e-15 87.8 189 38.6
Ciclev10005126m.g Citrus clementina HOM05D002626 ORTHO05D002749 1.8e-15 87.0 191 38.2
Gohir.A12G006600 Gossypium hirsutum HOM05D002626 ORTHO05D002749 1.8e-15 87.0 228 38.6
Cpa.g.sc16.59 Carica papaya HOM05D002626 ORTHO05D002749 6.9e-15 85.1 191 37.7
Oeu021629.1 Olea europaea HOM05D002626 ORTHO05D002749 9.1e-15 84.7 189 36.0
Glyma.13G211400 Glycine max HOM05D002626 ORTHO05D002749 1.2e-14 84.3 248 31.0
Nitab4.5_0000059g0080 Nicotiana tabacum HOM05D002626 ORTHO05D002749 1.2e-14 84.3 188 38.3
PSO407G0431 Papaver somniferum HOM05D002626 ORTHO05D002749 1.2e-14 84.3 192 39.6
Ciclev10020022m.g Citrus clementina HOM05D002626 ORTHO05D002749 2.0e-14 83.6 232 35.3
Gorai.008G006000 Gossypium raimondii HOM05D002626 ORTHO05D002749 2.6e-14 83.2 223 37.2
Nn4g26139 Nelumbo nucifera HOM05D002626 ORTHO05D002749 2.6e-14 83.2 197 38.1
TWI73G0323 Tripterygium wilfordii HOM05D002626 ORTHO05D002749 2.6e-14 83.2 190 36.3
Gohir.D12G006000 Gossypium hirsutum HOM05D002626 ORTHO05D002749 3.4e-14 82.8 228 37.3
QL12p022920 Quercus lobata HOM05D002626 ORTHO05D002749 3.4e-14 82.8 249 33.7
Cfa006085 Carpinus fangiana HOM05D002626 ORTHO05D002749 4.5e-14 82.4 232 35.8
RcHm_v2.0_Chr4g0419271 Rosa chinensis HOM05D002626 ORTHO05D002749 4.5e-14 82.4 189 42.9
Sed0020564 Sechium edule HOM05D002626 ORTHO05D002749 1.0e-13 81.3 216 31.5
Manes.03G187300 Manihot esculenta HOM05D002626 ORTHO05D002749 1.3e-13 80.9 181 38.7
Sc19g0004690 Simmondsia chinensis HOM05D002626 ORTHO05D002749 1.7e-13 80.5 194 37.6
arahy.Tifrunner.gnm1.ann1.WS6KBW Arachis hypogaea HOM05D002626 ORTHO05D002749 2.2e-13 80.1 217 38.7
Migut.G00248 Erythranthe guttata HOM05D002626 ORTHO05D002749 2.9e-13 79.7 188 37.2
PSO170G6443 Papaver somniferum HOM05D002626 ORTHO05D002749 2.9e-13 79.7 187 40.1
Sopen01g032140 Solanum pennellii HOM05D002626 ORTHO05D002749 2.9e-13 79.7 185 36.8
CANSAT25G0374 Cannabis sativa HOM05D002626 ORTHO05D002749 3.8e-13 79.3 205 35.6
CiPaw.01G157700 Carya illinoinensis HOM05D002626 ORTHO05D002749 3.8e-13 79.3 190 36.8
Solyc01g080340.3 Solanum lycopersicum HOM05D002626 ORTHO05D002749 5.0e-13 79.0 185 35.7
CiPaw.08G102400 Carya illinoinensis HOM05D002626 ORTHO05D002749 6.5e-13 78.6 252 30.6
Haze_04764 Corylus avellana HOM05D002626 ORTHO05D002749 6.5e-13 78.6 238 32.4
Nitab4.5_0000535g0150 Nicotiana tabacum HOM05D002626 ORTHO05D002749 8.5e-13 78.2 188 37.8
THA.LOC104802739 Tarenaya hassleriana HOM05D002626 ORTHO05D002749 8.5e-13 78.2 188 35.1
FAN17G1882 Fragaria x ananassa HOM05D002626 ORTHO05D002749 1.1e-12 77.8 189 32.3
Peaxi162Scf00095g00072 Petunia axillaris HOM05D002626 ORTHO05D002749 1.1e-12 77.8 188 37.2
TAR633G1787 Trochodendron aralioides HOM05D002626 ORTHO05D002749 1.1e-12 77.8 223 34.1
Sed0019043 Sechium edule HOM05D002626 ORTHO05D002749 1.4e-12 77.4 191 33.5
TAR362G1114 Trochodendron aralioides HOM05D002626 ORTHO05D002749 1.4e-12 77.4 248 31.9
vmacro02541 Vaccinium macrocarpon HOM05D000488 ORTHO05D002749 1.4e-12 77.4 218 32.1
CANSAT78G2302 Cannabis sativa HOM05D002626 ORTHO05D002749 1.9e-12 77.0 183 43.2
Phvul.006G157500 Phaseolus vulgaris HOM05D002626 ORTHO05D002749 1.9e-12 77.0 231 33.3
CsaV3_7G028520 Cucumis sativus L. HOM05D002626 ORTHO05D002749 2.5e-12 76.6 231 33.3
Glyma.15G101300 Glycine max HOM05D002626 ORTHO05D002749 2.5e-12 76.6 230 33.9
Thecc.01G285200 Theobroma cacao HOM05D002626 ORTHO05D002749 2.5e-12 76.6 228 35.1
Psat1g185240 Pisum sativum HOM05D002626 ORTHO05D002749 3.2e-12 76.3 238 32.4
MBI17_g29026_MAGBIO Magnolia biondii HOM05D002626 ORTHO05D002749 4.2e-12 75.9 195 34.4
Rhsim13G0021700 Rhododendron simsii HOM05D002626 ORTHO05D002749 4.2e-12 75.9 225 34.2
CAN.G889.20 Capsicum annuum HOM05D002626 ORTHO05D002749 5.5e-12 75.5 190 37.9
MELO3C015869.2 Cucumis melo HOM05D002626 ORTHO05D002749 7.2e-12 75.1 233 34.3
FAN07G1094 Fragaria x ananassa HOM05D002626 ORTHO05D002749 1.2e-11 74.3 189 33.9
Atru.chr4.2691 Acer truncatum HOM05D002626 ORTHO05D002749 1.6e-11 73.9 193 37.3
Cpa.g.sc1652.1 Carica papaya HOM05D002626 ORTHO05D002749 2.1e-11 73.6 227 32.6
PSO210G5367 Papaver somniferum HOM05D002626 ORTHO05D002749 2.1e-11 73.6 209 32.1
PGSC0003DMG400012765 Solanum tuberosum HOM05D002626 ORTHO05D002749 2.1e-11 73.6 187 34.2
Aqoxy5G00555 Aquilegia oxysepala HOM05D002626 ORTHO05D002749 2.7e-11 73.2 206 33.0
Eucgr.H03637 Eucalyptus grandis HOM05D002626 ORTHO05D002749 3.6e-11 72.8 228 28.9
Manes.05G072200 Manihot esculenta HOM05D002626 ORTHO05D002749 3.6e-11 72.8 222 34.2
FvH4_4g14080 Fragaria vesca HOM05D002626 ORTHO05D002749 4.7e-11 72.4 189 32.8
FAN12G3398 Fragaria x ananassa HOM05D002626 ORTHO05D002749 4.7e-11 72.4 189 32.8
PSO832G2564 Papaver somniferum HOM05D002626 ORTHO05D002749 4.7e-11 72.4 209 31.6
TPR.G18027 Trifolium pratense HOM05D002626 ORTHO05D002749 6.1e-11 72.0 208 35.6
Duzib133G0595 Durio zibethinus HOM05D002626 ORTHO05D002749 1.4e-10 70.9 229 32.8
Duzib138G0100 Durio zibethinus HOM05D002626 ORTHO05D002749 1.4e-10 70.9 228 33.8
Haze_01001 Corylus avellana HOM05D002626 ORTHO05D002749 1.8e-10 70.5 188 35.6
Glyma.03G149800 Glycine max HOM05D002626 ORTHO05D002749 3.0e-10 69.7 199 36.2
Potri.010G028801 Populus trichocarpa HOM05D002626 ORTHO05D002749 3.0e-10 69.7 206 36.4
Sabra08G0161600 Salix brachista HOM05D002626 ORTHO05D002749 3.0e-10 69.7 187 36.4
Sed0018079 Sechium edule HOM05D002626 ORTHO05D002749 3.0e-10 69.7 224 34.4
CSS0042341 Camellia sinensis var. sinensis HOM05D002626 ORTHO05D002749 3.9e-10 69.3 207 34.3
Potri.008G199000 Populus trichocarpa HOM05D002626 ORTHO05D002749 3.9e-10 69.3 189 35.4
HPP92_025236 Vanilla planifolia HOM05D002626 ORTHO05D002749 5.1e-10 68.9 216 30.6
Lj6P664T52 Lonicera japonica HOM05D002626 ORTHO05D002749 6.7e-10 68.6 213 30.5
VMungo0540G2474 Vigna mungo HOM05D002626 ORTHO05D002749 8.8e-10 68.2 233 34.3
Manes.01G211100 Manihot esculenta HOM05D002626 ORTHO05D002749 1.5e-09 67.4 222 27.9
Cfa015547 Carpinus fangiana HOM05D002626 ORTHO05D002749 2.0e-09 67.0 188 34.6
Lalb_Chr21g0306611 Lupinus albus HOM05D002626 ORTHO05D002749 2.0e-09 67.0 245 26.1
SGA_v2.0_scaffold142G35623 Striga asiatica HOM05D002626 ORTHO05D002749 2.6e-09 66.6 183 38.3
SGA_v2.0_scaffold1G00439 Striga asiatica HOM05D002626 ORTHO05D002749 2.6e-09 66.6 213 37.1
Duzib211G0157 Durio zibethinus HOM05D002626 ORTHO05D002749 4.4e-09 65.9 219 31.1
Lsat_1_v5_gn_3_24921 Lactuca sativa HOM05D002626 ORTHO05D002749 4.4e-09 65.9 189 36.5
Cc03_g02830 Coffea canephora HOM05D002626 ORTHO05D002749 7.4e-09 65.1 188 34.6
Aa31LG9G4790 Aethionema arabicum HOM05D002626 ORTHO05D002749 9.7e-09 64.7 211 31.3
CDE09G1249 Ceratophyllum demersum HOM05D002626 ORTHO05D002749 9.7e-09 64.7 216 34.3
Thhalv10025468m.g Eutrema salsugineum HOM05D002626 ORTHO05D002749 1.3e-08 64.3 178 33.7
THA.LOC104801214 Tarenaya hassleriana HOM05D002626 ORTHO05D002749 1.7e-08 63.9 191 29.8
Ca_08557_v3 Cicer arietinum L. HOM05D002626 ORTHO05D002749 2.2e-08 63.5 189 29.1
Ca_08591_v3 Cicer arietinum L. HOM05D002626 ORTHO05D002749 2.2e-08 63.5 189 29.1
Psat6g170040 Pisum sativum HOM05D002626 ORTHO05D002749 2.8e-08 63.2 232 29.7
A10p01900 Brassica napus HOM05D002626 ORTHO05D002749 4.8e-08 62.4 208 28.8
Duzib212G0333 Durio zibethinus HOM05D002626 ORTHO05D002749 4.8e-08 62.4 190 32.6
unitig_26.g8939 Utricularia gibba HOM05D002626 ORTHO05D002749 4.8e-08 62.4 201 31.8
AL9U10970 Arabidopsis lyrata HOM05D002626 ORTHO05D002749 6.3e-08 62.0 179 30.7
SalBow2G1774 Salvia bowleyana HOM05D002626 ORTHO05D002749 8.2e-08 61.6 49 61.2
SalBow2G2417 Salvia bowleyana HOM05D002626 ORTHO05D002749 8.2e-08 61.6 49 61.2
Sabra08G0161500 Salix brachista HOM05D002626 ORTHO05D002749 1.1e-07 61.2 50 62.0
TWI14G0270 Tripterygium wilfordii HOM05D002626 ORTHO05D002749 1.1e-07 61.2 246 27.6
TPR.G32843 Trifolium pratense HOM05D002626 ORTHO05D002749 1.4e-07 60.8 184 26.6
arahy.Tifrunner.gnm1.ann1.51INSQ Arachis hypogaea HOM05D002626 ORTHO05D002749 1.8e-07 60.5 225 32.0
CsaV3_3G013870 Cucumis sativus L. HOM05D002626 ORTHO05D002749 2.4e-07 60.1 196 29.1
Lalb_Chr06g0163161 Lupinus albus HOM05D002626 ORTHO05D002749 2.4e-07 60.1 244 26.6
PGR119G0265 Punica granatum HOM05D002626 ORTHO05D002749 2.4e-07 60.1 234 27.8
SEGI_28940 Sequoiadendron giganteum HOM05D002626 ORTHO05D002749 2.4e-07 60.1 228 24.6
unitig_21.g20289 Utricularia gibba HOM05D002626 ORTHO05D002749 2.4e-07 60.1 46 65.2
BcaC02g09444 Brassica carinata HOM05D002626 ORTHO05D002749 3.1e-07 59.7 178 30.3
C04p42810 Brassica napus HOM05D002626 ORTHO05D002749 3.1e-07 59.7 178 30.3
BolC4t25847H Brassica oleracea HOM05D002626 ORTHO05D002749 3.1e-07 59.7 178 30.3
DCAR_030584 Daucus carota HOM05D002626 ORTHO05D002749 3.1e-07 59.7 192 35.9
Gohir.D09G232600 Gossypium hirsutum HOM05D002626 ORTHO05D002749 3.1e-07 59.7 189 30.7
Lj2P1180T46 Lonicera japonica HOM05D002626 ORTHO05D002749 3.1e-07 59.7 177 28.8
Medtr7g094240 Medicago truncatula HOM05D002626 ORTHO05D002749 3.1e-07 59.7 187 28.9
Phvul.001G147700 Phaseolus vulgaris HOM05D002626 ORTHO05D002749 3.1e-07 59.7 216 32.9
Potri.008G199100 Populus trichocarpa HOM05D002626 ORTHO05D002749 3.1e-07 59.7 50 60.0
Sp7g10530 Schrenkiella parvula HOM05D002626 ORTHO05D002749 3.1e-07 59.7 189 29.6
AT4G13110 Arabidopsis thaliana HOM05D002626 ORTHO05D002749 4.1e-07 59.3 49 59.2
A08p37380 Brassica napus HOM05D002626 ORTHO05D002749 5.3e-07 58.9 209 28.7
Migut.D00253 Erythranthe guttata HOM05D002626 ORTHO05D002749 5.3e-07 58.9 49 57.1
Migut.N02171 Erythranthe guttata HOM05D002626 ORTHO05D002749 5.3e-07 58.9 49 57.1
MSTRG.18208 Avicennia marina HOM05D002626 ORTHO05D002749 7.0e-07 58.5 170 27.6
BcaC05g24538 Brassica carinata HOM05D002626 ORTHO05D002749 7.0e-07 58.5 208 28.8
CARHR218610 Cardamine hirsuta HOM05D002626 ORTHO05D002749 7.0e-07 58.5 49 57.1
Migut.N02142 Erythranthe guttata HOM05D002626 ORTHO05D002749 7.0e-07 58.5 49 59.2
Glyma.10G023800 Glycine max HOM05D002626 ORTHO05D002749 7.0e-07 58.5 223 27.4
TWI59G0111 Tripterygium wilfordii HOM05D002626 ORTHO05D002749 9.1e-07 58.2 244 27.5
BraA08t35635Z Brassica rapa HOM05D002626 ORTHO05D002749 1.2e-06 57.8 204 29.4
FAN15G1209 Fragaria x ananassa HOM05D002626 ORTHO05D002749 1.2e-06 57.8 245 28.2
AL1G12870 Arabidopsis lyrata HOM05D002626 ORTHO05D002749 1.5e-06 57.4 213 28.6
Carub.0007s2960 Capsella rubella HOM05D002626 ORTHO05D002749 1.5e-06 57.4 177 30.5
Solyc09g074060.3 Solanum lycopersicum HOM05D002626 ORTHO05D002749 1.5e-06 57.4 49 53.1
GSVIVG01017862001 Vitis vinifera HOM05D002626 ORTHO05D002749 1.5e-06 57.4 185 34.1
Gorai.004G083900 Gossypium raimondii HOM05D002626 ORTHO05D002749 2.0e-06 57.0 220 31.8
Oeu047888.1 Olea europaea HOM05D002626 ORTHO05D002749 2.0e-06 57.0 127 31.5
CAN.G956.7 Capsicum annuum HOM05D002626 ORTHO05D002749 2.6e-06 56.6 126 39.7
Ca_00596_v3 Cicer arietinum L. HOM05D002626 ORTHO05D002749 2.6e-06 56.6 224 30.4
MELO3C006579.2 Cucumis melo HOM05D002626 ORTHO05D002749 2.6e-06 56.6 49 53.1
Gohir.A09G231500 Gossypium hirsutum HOM05D002626 ORTHO05D002749 2.6e-06 56.6 189 30.2
Sc05g0005160 Simmondsia chinensis HOM05D002626 ORTHO05D002749 2.6e-06 56.6 223 29.6
Sopen09g028880 Solanum pennellii HOM05D002626 ORTHO05D002749 2.6e-06 56.6 116 36.2
unitig_749.g14061 Utricularia gibba HOM05D002626 ORTHO05D002749 2.6e-06 56.6 183 32.2
BcaC07g36970 Brassica carinata HOM05D002626 ORTHO05D002749 3.5e-06 56.2 206 29.1
C08p00540 Brassica napus HOM05D002626 ORTHO05D002749 3.5e-06 56.2 206 29.1
ClCG09G006790 Citrullus lanatus HOM05D002626 ORTHO05D002749 3.5e-06 56.2 245 30.6
Gorai.006G255500 Gossypium raimondii HOM05D002626 ORTHO05D002749 3.5e-06 56.2 189 30.2
Lsat_1_v5_gn_9_4601 Lactuca sativa HOM05D002626 ORTHO05D002749 3.5e-06 56.2 223 28.3
Aqoxy2G03206 Aquilegia oxysepala HOM05D002626 ORTHO05D002749 4.5e-06 55.8 50 56.0
Glyma.19G152800 Glycine max HOM05D002626 ORTHO05D002749 4.5e-06 55.8 131 32.8
unitig_744.g24486 Utricularia gibba HOM05D002626 ORTHO05D002749 4.5e-06 55.8 46 58.7
Ca_10399_v3 Cicer arietinum L. HOM05D002626 ORTHO05D002749 5.9e-06 55.5 49 55.1
Cc01_g19870 Coffea canephora HOM05D002626 ORTHO05D002749 5.9e-06 55.5 263 26.2
Lj5g0004574 Lotus japonicus HOM05D002626 ORTHO05D002749 5.9e-06 55.5 246 28.5
RcHm_v2.0_Chr6g0291911 Rosa chinensis HOM05D002626 ORTHO05D002749 5.9e-06 55.5 240 30.0
GSVIVG01011067001 Vitis vinifera HOM05D002626 ORTHO05D002749 5.9e-06 55.5 46 58.7
CARHR002720 Cardamine hirsuta HOM05D002626 ORTHO05D002749 7.7e-06 55.1 49 55.1
Duzib151G1123 Durio zibethinus HOM05D002626 ORTHO05D002749 7.7e-06 55.1 189 32.3
Thhalv10009692m.g Eutrema salsugineum HOM05D002626 ORTHO05D002749 7.7e-06 55.1 218 29.4
Phvul.007G168800 Phaseolus vulgaris HOM05D002626 ORTHO05D002749 7.7e-06 55.1 213 28.2
PGSC0003DMG400003842 Solanum tuberosum HOM05D002626 ORTHO05D002749 7.7e-06 55.1 116 34.5


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