Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 4.4e-89 331.3 165 100.0
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 4.7e-67 258.1 159 80.5
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 1.0e-66 256.9 159 78.6
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 6.8e-66 254.2 158 81.0
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 2.6e-65 252.3 156 80.1
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 3.4e-65 251.9 156 79.5
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 9.8e-65 250.4 156 79.5
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 1.3e-64 250.0 156 78.8
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 2.2e-64 249.2 156 79.5
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 3.7e-64 248.4 151 82.1
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 4.9e-64 248.1 158 77.2
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 8.3e-64 247.3 159 75.5
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 1.1e-63 246.9 159 75.5
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 3.2e-63 245.4 155 76.1
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 7.0e-63 244.2 151 80.1
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 1.6e-62 243.0 161 74.5
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 2.7e-62 242.3 159 76.7
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 3.5e-62 241.9 156 76.3
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.3e-61 240.0 172 70.3
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 1.7e-61 239.6 151 80.8
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 2.3e-61 239.2 151 80.1
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 3.9e-61 238.4 154 75.3
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 1.9e-60 236.1 159 74.8
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.9e-60 236.1 159 74.8
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 4.3e-60 235.0 156 73.1
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 2.1e-59 232.6 150 75.3
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 2.8e-59 232.3 159 73.6
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 3.6e-59 231.9 156 75.6
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 3.6e-59 231.9 155 76.1
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 4.7e-59 231.5 159 73.6
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 3.1e-58 228.8 152 76.3
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 5.2e-58 228.0 155 72.9
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 5.2e-58 228.0 155 72.9
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 6.8e-58 227.6 150 74.0
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 1.2e-57 226.9 151 76.2
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 1.2e-57 226.9 155 74.2
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 2.0e-57 226.1 152 74.3
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 2.0e-57 226.1 156 71.2
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 4.4e-57 224.9 157 71.3
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 4.4e-57 224.9 156 71.2
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 9.8e-57 223.8 155 72.3
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 1.3e-56 223.4 156 74.4
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 1.3e-56 223.4 154 73.4
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 1.3e-56 223.4 154 73.4
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 1.7e-56 223.0 158 68.4
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.2e-56 222.6 158 70.3
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 3.7e-56 221.9 156 69.9
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 1.1e-55 220.3 155 71.0
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 1.4e-55 219.9 156 71.2
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 1.9e-55 219.5 156 70.5
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 3.2e-55 218.8 156 69.2
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 3.2e-55 218.8 154 71.4
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 3.2e-55 218.8 156 68.6
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 4.1e-55 218.4 154 68.2
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 4.1e-55 218.4 159 71.7
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 3.5e-54 215.3 156 68.6
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 3.5e-54 215.3 157 65.6
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 3.5e-54 215.3 157 64.3
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 7.8e-54 214.2 149 71.8
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 1.0e-53 213.8 159 69.8
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 1.0e-53 213.8 159 71.1
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 1.7e-53 213.0 156 70.5
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 3.0e-53 212.2 156 66.0
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 3.0e-53 212.2 156 67.9
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 3.9e-53 211.8 155 69.0
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 3.9e-53 211.8 159 69.8
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 5.0e-53 211.5 159 69.8
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 6.6e-53 211.1 160 66.9
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 6.6e-53 211.1 160 66.9
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 8.6e-53 210.7 155 67.7
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 1.5e-52 209.9 161 65.8
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 1.5e-52 209.9 137 74.5
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 7.3e-52 207.6 156 67.3
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 9.5e-52 207.2 155 67.1
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 1.2e-51 206.8 159 67.9
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 1.6e-51 206.5 159 62.9
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 2.8e-51 205.7 159 68.6
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 3.6e-51 205.3 151 66.9
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 3.6e-51 205.3 135 73.3
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 6.2e-51 204.5 160 66.2
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 8.1e-51 204.1 155 66.5
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 8.1e-51 204.1 157 66.9
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 8.1e-51 204.1 157 66.2
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 1.8e-50 203.0 155 66.5
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 2.3e-50 202.6 155 65.8
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 2.3e-50 202.6 159 62.9
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 5.8e-49 198.0 159 64.8
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 3.7e-48 195.3 150 64.7
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 4.9e-48 194.9 158 63.9
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 4.9e-48 194.9 183 59.6
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 2.1e-46 189.5 153 60.1
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 3.5e-46 188.7 151 60.3
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.0e-45 187.2 135 68.9
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 1.3e-45 186.8 152 60.5
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 2.3e-45 186.0 151 60.3
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 2.5e-44 182.6 140 66.4
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 3.6e-43 178.7 155 56.8
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 1.9e-39 166.4 99 80.8
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 1.6e-38 163.3 164 51.8
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 2.1e-38 162.9 152 55.3
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 2.0e-33 146.4 146 51.4
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 1.3e-32 143.7 114 65.8
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 1.7e-32 143.3 90 78.9
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 3.8e-32 142.1 112 66.1
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 4.2e-31 138.7 90 72.2
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 9.6e-28 127.5 78 76.9
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 5.4e-23 111.7 81 70.4
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 1.6e-22 110.2 82 69.5
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 1.6e-22 110.2 82 69.5
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 7.4e-20 101.3 79 67.1
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 9.6e-20 100.9 81 66.7
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 1.3e-19 100.5 82 67.1
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 2.9e-16 89.4 66 63.6
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 2.9e-16 89.4 99 48.5
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 5.5e-15 85.1 57 70.2
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 3.5e-14 82.4 66 60.6
Cre17.g705950 Chlamydomonas reinhardtii HOM05D007014 ORTHO05D008894 9.0e-10 67.8 127 33.9
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 1.3e-08 63.9 80 47.5
HanXRQChr13g0402451 Helianthus annuus HOM05D004398 ORTHO05D005268 1.6e-06 57.0 105 33.3
Hund03009 Selenicereus undatus HOM05D004398 ORTHO05D005268 2.7e-06 56.2 90 34.4
Peaxi162Scf00251g01121 Petunia axillaris HOM05D004398 ORTHO05D005268 3.5e-06 55.8 105 31.4
Nitab4.5_0000508g0250 Nicotiana tabacum HOM05D004398 ORTHO05D005268 7.9e-06 54.7 90 33.3


User provided reference genes

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