Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.3e-174 616.3 310 100.0
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.4e-152 543.1 315 88.6
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 2.1e-92 343.2 316 60.1
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 3.2e-85 319.3 304 58.9
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 1.8e-67 260.4 296 50.7
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 6.8e-59 231.9 166 71.1
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 2.6e-58 229.9 307 46.6
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 2.5e-53 213.4 175 65.1
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 3.3e-53 213.0 295 46.1
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 6.1e-52 208.8 296 46.3
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.2e-50 204.5 290 45.5
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.5e-50 204.1 290 45.2
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 2.0e-50 203.8 294 42.5
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 5.8e-50 202.2 292 46.2
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 1.7e-49 200.7 297 43.1
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 3.7e-49 199.5 271 47.6
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 6.4e-49 198.7 263 48.7
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 6.4e-49 198.7 263 48.7
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 3.2e-48 196.4 297 45.5
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 9.2e-48 194.9 202 54.5
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 8.6e-46 188.3 192 52.6
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.1e-45 188.0 252 46.0
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 1.1e-45 188.0 295 43.4
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.9e-45 187.2 289 42.6
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 2.1e-44 183.7 179 56.4
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 2.8e-44 183.3 171 57.3
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 4.0e-43 179.5 200 50.5
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 6.8e-43 178.7 213 49.3
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 2.6e-42 176.8 169 56.2
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 7.5e-42 175.3 308 39.9
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.7e-41 174.1 182 54.4
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 2.9e-41 173.3 169 58.6
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 2.9e-41 173.3 313 39.0
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 2.9e-41 173.3 300 40.3
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 4.9e-41 172.6 298 39.9
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.5e-39 166.4 180 54.4
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.9e-38 162.9 180 53.9
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 5.0e-38 162.5 180 53.9
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 8.6e-38 161.8 172 50.6
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.1e-37 161.4 204 48.5
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 2.1e-36 157.1 205 44.9
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 2.8e-36 156.8 179 52.0
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 4.7e-36 156.0 181 52.5
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 1.8e-35 154.1 187 48.7
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 2.3e-35 153.7 189 45.5
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 2.3e-35 153.7 308 37.3
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 2.3e-35 153.7 172 46.5
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 3.1e-35 153.3 172 47.1
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 4.0e-35 152.9 182 48.9
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 5.2e-35 152.5 190 50.0
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 6.8e-35 152.1 264 41.3
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 1.2e-34 151.4 177 48.6
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 1.2e-34 151.4 171 52.0
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 3.4e-34 149.8 290 35.9
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 4.4e-34 149.4 172 53.5
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 4.4e-34 149.4 190 47.4
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 4.4e-34 149.4 176 49.4
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 9.9e-34 148.3 172 50.6
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 2.2e-33 147.1 169 50.3
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 3.7e-33 146.4 281 37.4
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 6.4e-33 145.6 186 46.8
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 1.1e-32 144.8 169 49.7
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 1.1e-32 144.8 287 38.0
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 1.4e-32 144.4 130 56.2
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 2.4e-32 143.7 322 32.9
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 4.1e-32 142.9 173 52.0
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 4.1e-32 142.9 189 44.4
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 4.1e-32 142.9 181 47.0
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.2e-31 141.4 185 43.2
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 4.6e-31 139.4 269 40.1
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 1.3e-30 137.9 196 45.9
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 6.6e-30 135.6 190 45.8
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.9e-29 134.0 301 35.9
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 2.8e-28 130.2 185 43.8
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.1e-24 118.2 125 56.8
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 1.4e-24 117.9 140 51.4
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 3.2e-24 116.7 314 33.1
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.2e-23 114.8 179 43.0
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 1.2e-23 114.8 169 47.9
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 4.6e-23 112.8 154 46.8
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 8.7e-22 108.6 143 49.0
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 8.7e-22 108.6 199 39.7
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 1.5e-21 107.8 172 41.9
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 5.6e-21 105.9 172 41.9
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.2e-20 104.8 131 48.1
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 5.2e-19 99.4 150 42.0
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 7.6e-18 95.5 186 37.6
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 1.7e-17 94.4 78 65.4
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 3.2e-16 90.1 241 35.3
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 1.6e-15 87.8 193 38.9
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 2.7e-15 87.0 195 38.5
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 3.5e-15 86.7 175 33.1
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 4.6e-15 86.3 193 38.3
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 3.0e-14 83.6 175 32.0
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 5.1e-14 82.8 207 33.3
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 2.5e-13 80.5 143 41.3
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 3.6e-12 76.6 91 49.5
Eucgr.F02862 Eucalyptus grandis HOM05D006714 ORTHO05D008103 2.4e-11 73.9 108 38.9
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 6.7e-06 55.8 102 39.2


User provided reference genes

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