Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024061 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D033941 8.0e-35 149.8 73 100.0
CSS0047823 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D033941 3.0e-34 147.9 73 98.6
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 8.0e-19 96.7 55 76.4
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 2.6e-17 91.7 56 73.2
Dinv36526 Davidia involucrata HOM05D003537 ORTHO05D033941 1.3e-16 89.4 55 74.5
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.1e-15 86.3 55 67.3
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 2.3e-13 78.6 55 61.8
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 4.3e-12 74.3 55 60.0
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 5.6e-12 73.9 56 62.5
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 4.7e-11 70.9 55 54.5
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 4.7e-11 70.9 55 54.5
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 3.4e-09 64.7 55 50.9
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 7.5e-09 63.5 52 51.9
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 1.7e-08 62.4 53 52.8
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 2.9e-08 61.6 55 47.3
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 3.7e-08 61.2 55 49.1
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 3.7e-08 61.2 55 52.7
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.9e-08 60.8 55 47.3
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 4.9e-08 60.8 55 47.3
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 8.3e-08 60.1 55 47.3
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 8.3e-08 60.1 55 47.3
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 8.3e-08 60.1 55 47.3
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 1.4e-07 59.3 52 50.0
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 5.4e-07 57.4 55 49.1
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 7.0e-07 57.0 54 48.1
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 7.0e-07 57.0 55 41.8
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 9.2e-07 56.6 55 43.6
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 1.2e-06 56.2 55 47.3
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 1.2e-06 56.2 52 48.1
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.6e-06 55.8 55 45.5
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 1.6e-06 55.8 53 43.4
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 2.0e-06 55.5 55 47.3
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 2.0e-06 55.5 53 50.9
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 2.0e-06 55.5 51 47.1
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 2.7e-06 55.1 55 41.8
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 2.7e-06 55.1 57 45.6
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 3.5e-06 54.7 55 45.5
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 4.6e-06 54.3 55 45.5
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 4.6e-06 54.3 55 40.0
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 6.0e-06 53.9 55 49.1
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 6.0e-06 53.9 52 44.2


User provided reference genes

Program Settings