Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024055 Camellia sinensis var. sinensis HOM05D001766 ORTHO05D024730 2.4e-40 168.3 80 100.0
CSS0044782 Camellia sinensis var. sinensis HOM05D001766 ORTHO05D024730 2.4e-32 141.7 81 91.4
CSS0033108 Camellia sinensis var. sinensis HOM05D001766 ORTHO05D001875 3.3e-10 68.2 33 87.9
Actinidia31507 Actinidia chinensis HOM05D001766 ORTHO05D001875 1.3e-09 66.2 33 81.8
Dinv21672 Davidia involucrata HOM05D001766 ORTHO05D001875 1.3e-09 66.2 33 81.8
Sopen08g026760 Solanum pennellii HOM05D001766 ORTHO05D001875 2.2e-09 65.5 33 81.8
vmacro14136 Vaccinium macrocarpon HOM05D001766 ORTHO05D001875 6.3e-09 63.9 33 78.8
Peaxi162Scf00346g00416 Petunia axillaris HOM05D001766 ORTHO05D001875 1.1e-08 63.2 40 62.5
Solyc08g078250.4 Solanum lycopersicum HOM05D001766 ORTHO05D001875 1.8e-08 62.4 33 75.8
Nitab4.5_0009564g0030 Nicotiana tabacum HOM05D001766 ORTHO05D001875 2.4e-08 62.0 33 75.8
PGSC0003DMG400026236 Solanum tuberosum HOM05D001766 ORTHO05D001875 2.4e-08 62.0 33 75.8
Actinidia02165 Actinidia chinensis HOM05D001766 ORTHO05D001875 3.1e-08 61.6 33 75.8
CAN.G1312.13 Capsicum annuum HOM05D001766 ORTHO05D001875 3.1e-08 61.6 33 72.7
Nitab4.5_0002601g0060 Nicotiana tabacum HOM05D001766 ORTHO05D001875 3.1e-08 61.6 33 75.8
Actinidia10846 Actinidia chinensis HOM05D001766 ORTHO05D001875 4.1e-08 61.2 33 78.8
Oeu006827.1 Olea europaea HOM05D001766 ORTHO05D001875 5.3e-08 60.8 33 72.7
Actinidia14395 Actinidia chinensis HOM05D001766 ORTHO05D001875 9.1e-08 60.1 33 72.7
Rhsim07G0115500 Rhododendron simsii HOM05D001766 ORTHO05D001875 3.5e-07 58.2 28 82.1
CSS0044715 Camellia sinensis var. sinensis HOM05D001766 ORTHO05D001875 4.5e-07 57.8 33 69.7
Hma1.2p1_1335F.1_g276390 Hydrangea macrophylla HOM05D001766 ORTHO05D001875 5.9e-07 57.4 33 66.7
TAR374G1385 Trochodendron aralioides HOM05D001766 ORTHO05D001875 5.9e-07 57.4 33 69.7
Aa31LG10G14460 Aethionema arabicum HOM05D001766 ORTHO05D001875 1.0e-06 56.6 33 69.7
SGA_v2.0_scaffold104G30199 Striga asiatica HOM05D001766 ORTHO05D001875 1.0e-06 56.6 33 66.7
EL10Ac5g12320 Beta vulgaris HOM05D001766 ORTHO05D001875 1.3e-06 56.2 36 63.9
CiPaw.11G083100 Carya illinoinensis HOM05D001766 ORTHO05D001875 1.3e-06 56.2 36 66.7
Gohir.A12G096600 Gossypium hirsutum HOM05D001766 ORTHO05D001875 1.3e-06 56.2 33 66.7
Gohir.D12G099400 Gossypium hirsutum HOM05D001766 ORTHO05D001875 1.3e-06 56.2 33 66.7
Gorai.008G108300 Gossypium raimondii HOM05D001766 ORTHO05D001875 1.3e-06 56.2 33 66.7
BcaB02g07422 Brassica carinata HOM05D001766 ORTHO05D001875 1.7e-06 55.8 48 52.1
Migut.A01154 Erythranthe guttata HOM05D001766 ORTHO05D001875 1.7e-06 55.8 36 55.6
Glyma.01G207200 Glycine max HOM05D001766 ORTHO05D001875 1.7e-06 55.8 33 69.7
CARHR170660 Cardamine hirsuta HOM05D001766 ORTHO05D001875 2.2e-06 55.5 48 52.1
Cc08_g11970 Coffea canephora HOM05D001766 ORTHO05D001875 2.2e-06 55.5 33 63.6
Dinv39180 Davidia involucrata HOM05D001766 ORTHO05D001875 2.2e-06 55.5 33 66.7
Glyma.11G036032 Glycine max HOM05D001766 ORTHO05D024730 2.2e-06 55.5 32 71.9
SalBow6G4780 Salvia bowleyana HOM05D001766 ORTHO05D001875 2.2e-06 55.5 33 66.7
BcaC08g45048 Brassica carinata HOM05D001766 ORTHO05D001875 2.9e-06 55.1 48 52.1
BolC6t37828H Brassica oleracea HOM05D001766 ORTHO05D001875 2.9e-06 55.1 48 52.1
QL12p010900 Quercus lobata HOM05D001766 ORTHO05D001875 2.9e-06 55.1 33 69.7
Thhalv10006085m.g Eutrema salsugineum HOM05D001766 ORTHO05D001875 3.8e-06 54.7 54 50.0
Hma1.2p1_1196F.1_g266055 Hydrangea macrophylla HOM05D001766 ORTHO05D001875 3.8e-06 54.7 33 63.6
Lj2g0012296 Lotus japonicus HOM05D001766 ORTHO05D001875 3.8e-06 54.7 47 55.3
TAR636G3076 Trochodendron aralioides HOM05D001766 ORTHO05D001875 3.8e-06 54.7 33 66.7
CiPaw.12G049200 Carya illinoinensis HOM05D001766 ORTHO05D001875 5.0e-06 54.3 33 69.7
unitig_21.g20308 Utricularia gibba HOM05D001766 ORTHO05D001875 5.0e-06 54.3 33 63.6
AL5G42580 Arabidopsis lyrata HOM05D001766 ORTHO05D001875 6.5e-06 53.9 48 50.0
GSVIVG01007149001 Vitis vinifera HOM05D001766 ORTHO05D001875 6.5e-06 53.9 31 74.2
ATR0057G087 Amborella trichopoda HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 66.7
Aqoxy3G02753 Aquilegia oxysepala HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 66.7
CANSAT21G0485 Cannabis sativa HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 60.6
CANSAT21G2596 Cannabis sativa HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 60.6
FvH4_5g19650 Fragaria vesca HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 66.7
FAN08G2554 Fragaria x ananassa HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 66.7
FAN18G2463 Fragaria x ananassa HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 66.7
Manes.05G053500 Manihot esculenta HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 63.6
Prupe.2G128000 Prunus persica HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 66.7
RcHm_v2.0_Chr1g0347441 Rosa chinensis HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 66.7


User provided reference genes

Program Settings