Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024051 Camellia sinensis var. sinensis HOM05D004745 ORTHO05D005626 7.3e-86 320.5 157 100.0
CSS0020299 Camellia sinensis var. sinensis HOM05D004745 ORTHO05D005626 3.5e-80 301.6 154 95.5
Hma1.2p1_0394F.1_g143470 Hydrangea macrophylla HOM05D004745 ORTHO05D005626 3.0e-47 192.2 154 62.3
Actinidia15789 Actinidia chinensis HOM05D004745 ORTHO05D005626 2.8e-45 185.7 154 61.7
vmacro18973 Vaccinium macrocarpon HOM05D004745 ORTHO05D005626 1.2e-43 180.3 154 63.0
Rhsim08G0215400 Rhododendron simsii HOM05D004745 ORTHO05D005626 1.4e-41 173.3 154 60.4
Dinv30579 Davidia involucrata HOM05D004745 ORTHO05D005626 9.4e-41 170.6 151 62.3
TAR636G0831 Trochodendron aralioides HOM05D004745 ORTHO05D005626 1.5e-38 163.3 154 55.8
Oeu000434.1 Olea europaea HOM05D004745 ORTHO05D005626 3.7e-37 158.7 157 54.1
Nn8g39406 Nelumbo nucifera HOM05D004745 ORTHO05D005626 1.4e-36 156.8 155 53.5
Potri.001G171800 Populus trichocarpa HOM05D004745 ORTHO05D005626 3.5e-35 152.1 154 54.5
Sabra01G0139800 Salix brachista HOM05D004745 ORTHO05D005626 4.5e-35 151.8 154 53.9
TWI12G1169 Tripterygium wilfordii HOM05D004745 ORTHO05D005626 4.5e-35 151.8 155 54.8
PSO170G2068 Papaver somniferum HOM05D004745 ORTHO05D005626 1.0e-34 150.6 158 53.2
DCAR_025491 Daucus carota HOM05D004745 ORTHO05D005626 1.3e-34 150.2 156 55.8
Cc04_g04150 Coffea canephora HOM05D004745 ORTHO05D005626 1.7e-34 149.8 161 53.4
PSO455G0289 Papaver somniferum HOM05D004745 ORTHO05D005626 2.2e-34 149.4 159 52.2
QL05p028225 Quercus lobata HOM05D004745 ORTHO05D005626 5.5e-33 144.8 155 50.3
GSVIVG01017280001 Vitis vinifera HOM05D004745 ORTHO05D005626 5.5e-33 144.8 156 53.8
Cfa001995 Carpinus fangiana HOM05D004745 ORTHO05D005626 2.7e-32 142.5 157 54.1
FvH4_6g30190 Fragaria vesca HOM05D004745 ORTHO05D005626 2.7e-32 142.5 157 55.4
MSTRG.22729 Avicennia marina HOM05D004745 ORTHO05D005626 4.7e-32 141.7 154 51.9
FAN14G5774 Fragaria x ananassa HOM05D004745 ORTHO05D005626 4.7e-32 141.7 157 55.4
Migut.I00794 Erythranthe guttata HOM05D004745 ORTHO05D005626 6.1e-32 141.4 155 47.7
Lsat_1_v5_gn_5_132160 Lactuca sativa HOM05D004745 ORTHO05D005626 8.0e-32 141.0 158 50.6
Haze_16523 Corylus avellana HOM05D004745 ORTHO05D005626 3.0e-31 139.0 154 52.6
Sc06g0004020 Simmondsia chinensis HOM05D004745 ORTHO05D005626 5.2e-31 138.3 155 52.3
CANSAT56G2452 Cannabis sativa HOM05D004745 ORTHO05D005626 6.7e-31 137.9 160 52.5
CsaV3_4G001440 Cucumis sativus L. HOM05D004745 ORTHO05D005626 1.5e-30 136.7 154 48.7
MBI04_g07638_MAGBIO Magnolia biondii HOM05D004745 ORTHO05D005626 2.0e-30 136.3 157 52.2
Prupe.3G081800 Prunus persica HOM05D004745 ORTHO05D005626 2.6e-30 136.0 155 50.3
ClCG07G012760 Citrullus lanatus HOM05D004745 ORTHO05D005626 3.3e-30 135.6 154 48.1
ECA238G2546 Erigeron canadensis HOM05D004745 ORTHO05D005626 4.4e-30 135.2 159 52.2
FAN09G2173 Fragaria x ananassa HOM05D004745 ORTHO05D005626 5.7e-30 134.8 156 53.2
SalBow2G2198 Salvia bowleyana HOM05D004745 ORTHO05D005626 5.7e-30 134.8 154 51.9
FAN02G3524 Fragaria x ananassa HOM05D004745 ORTHO05D005626 2.2e-29 132.9 156 51.9
Gohir.A10G075700 Gossypium hirsutum HOM05D004745 ORTHO05D005626 2.8e-29 132.5 155 49.7
Nitab4.5_0009683g0020 Nicotiana tabacum HOM05D004745 ORTHO05D005626 2.8e-29 132.5 154 47.4
Nitab4.5_0000413g0130 Nicotiana tabacum HOM05D004745 ORTHO05D005626 3.7e-29 132.1 154 47.4
RcHm_v2.0_Chr2g0136431 Rosa chinensis HOM05D004745 ORTHO05D005626 4.8e-29 131.7 157 51.0
PGSC0003DMG400029962 Solanum tuberosum HOM05D004745 ORTHO05D005626 4.8e-29 131.7 154 46.8
Peaxi162Scf00320g00620 Petunia axillaris HOM05D004745 ORTHO05D005626 6.3e-29 131.3 160 48.1
Peaxi162Scf00320g00617 Petunia axillaris HOM05D004745 ORTHO05D005626 8.2e-29 131.0 160 47.5
Sopen07g005700 Solanum pennellii HOM05D004745 ORTHO05D005626 8.2e-29 131.0 154 47.4
CiPaw.01G245300 Carya illinoinensis HOM05D004745 ORTHO05D005626 1.1e-28 130.6 127 55.9
COL.COLO4_12918 Corchorus olitorius HOM05D004745 ORTHO05D005626 1.8e-28 129.8 154 49.4
Gohir.D10G075900 Gossypium hirsutum HOM05D004745 ORTHO05D005626 1.8e-28 129.8 155 49.0
Hund06573 Selenicereus undatus HOM05D004745 ORTHO05D005626 1.8e-28 129.8 155 49.7
Gorai.011G081700 Gossypium raimondii HOM05D004745 ORTHO05D005626 2.4e-28 129.4 155 49.0
EL10Ac9g21930 Beta vulgaris HOM05D004745 ORTHO05D005626 3.1e-28 129.0 150 52.7
Solyc07g015860.3 Solanum lycopersicum HOM05D004745 ORTHO05D005626 4.1e-28 128.6 154 46.1
CAN.G1158.5 Capsicum annuum HOM05D004745 ORTHO05D005626 5.3e-28 128.3 154 46.8
PGR102G0579 Punica granatum HOM05D004745 ORTHO05D005626 5.3e-28 128.3 162 49.4
Atru.chr1.3054 Acer truncatum HOM05D004745 ORTHO05D005626 7.0e-28 127.9 102 62.7
AUR62011549 Chenopodium quinoa HOM05D004745 ORTHO05D005626 7.0e-28 127.9 159 47.2
Manes.11G053800 Manihot esculenta HOM05D004745 ORTHO05D005626 7.0e-28 127.9 156 48.1
Thecc.06G070400 Theobroma cacao HOM05D004745 ORTHO05D005626 9.1e-28 127.5 154 48.7
AUR62016368 Chenopodium quinoa HOM05D004745 ORTHO05D005626 1.2e-27 127.1 169 49.7
ATR1156G012 Amborella trichopoda HOM05D004745 ORTHO05D005626 5.9e-27 124.8 155 46.5
Duzib235G0601 Durio zibethinus HOM05D004745 ORTHO05D005626 5.9e-27 124.8 154 48.1
MD13G1165900 Malus domestica HOM05D004745 ORTHO05D005626 5.9e-27 124.8 102 61.8
THA.LOC104808227 Tarenaya hassleriana HOM05D004745 ORTHO05D005626 7.7e-27 124.4 157 47.8
SGA_v2.0_scaffold5G02669 Striga asiatica HOM05D004745 ORTHO05D005626 1.3e-26 123.6 107 60.7
Eucgr.F02539 Eucalyptus grandis HOM05D004745 ORTHO05D005626 3.8e-26 122.1 99 64.6
Lsat_1_v5_gn_4_105820 Lactuca sativa HOM05D004745 ORTHO05D005626 1.1e-25 120.6 159 47.2
MD17G1207300 Malus domestica HOM05D004745 ORTHO05D005626 1.1e-25 120.6 101 60.4
CARHR015930 Cardamine hirsuta HOM05D004745 ORTHO05D005626 1.5e-25 120.2 155 48.4
HanXRQChr10g0303121 Helianthus annuus HOM05D004745 ORTHO05D005626 1.5e-25 120.2 128 53.9
Ciclev10026288m.g Citrus clementina HOM05D004745 ORTHO05D005626 1.9e-25 119.8 154 44.8
Sed0026286 Sechium edule HOM05D004745 ORTHO05D005626 2.5e-25 119.4 155 48.4
HanXRQChr16g0500481 Helianthus annuus HOM05D004745 ORTHO05D005626 7.2e-25 117.9 158 46.8
VMungo0331G1340 Vigna mungo HOM05D004745 ORTHO05D005626 1.6e-24 116.7 147 49.0
HPP92_024132 Vanilla planifolia HOM05D004745 ORTHO05D005626 2.1e-24 116.3 96 62.5
A09p61430 Brassica napus HOM05D004745 ORTHO05D005626 2.7e-24 115.9 155 48.4
BraA09t41514Z Brassica rapa HOM05D004745 ORTHO05D005626 2.7e-24 115.9 155 48.4
Ca_29515_v3 Cicer arietinum L. HOM05D004745 ORTHO05D005626 3.6e-24 115.5 114 51.8
ECA238G4104 Erigeron canadensis HOM05D004745 ORTHO05D005626 3.6e-24 115.5 86 66.3
AL1G27500 Arabidopsis lyrata HOM05D004745 ORTHO05D005626 8.0e-24 114.4 86 67.4
ECA233G1751 Erigeron canadensis HOM05D004745 ORTHO05D005626 8.0e-24 114.4 92 64.1
Lj9A502G38 Lonicera japonica HOM05D004745 ORTHO05D005626 8.0e-24 114.4 76 75.0
C08p44990 Brassica napus HOM05D004745 ORTHO05D005626 1.0e-23 114.0 155 47.7
Carub.0001s1517 Capsella rubella HOM05D004745 ORTHO05D005626 1.0e-23 114.0 86 67.4
BcaC05g25480 Brassica carinata HOM05D004745 ORTHO05D005626 1.4e-23 113.6 96 61.5
unitig_747.g21294 Utricularia gibba HOM05D004745 ORTHO05D005626 1.4e-23 113.6 116 54.3
Aa31LG7G150 Aethionema arabicum HOM05D004745 ORTHO05D005626 1.8e-23 113.2 102 53.9
ECA232G3489 Erigeron canadensis HOM05D004745 ORTHO05D005626 3.0e-23 112.5 86 64.0
ECA238G0294 Erigeron canadensis HOM05D004745 ORTHO05D005626 3.0e-23 112.5 88 63.6
Glyma.08G210900 Glycine max HOM05D004745 ORTHO05D005626 5.2e-23 111.7 95 57.9
Lalb_Chr01g0012481 Lupinus albus HOM05D004745 ORTHO05D005626 6.8e-23 111.3 149 43.6
Phvul.010G154200 Phaseolus vulgaris HOM05D004745 ORTHO05D005626 6.8e-23 111.3 147 46.9
Ca_01071_v3 Cicer arietinum L. HOM05D004745 ORTHO05D005626 8.8e-23 110.9 110 52.7
AT1G15390 Arabidopsis thaliana HOM05D004745 ORTHO05D005626 1.2e-22 110.5 86 65.1
BcaC07g41503 Brassica carinata HOM05D004745 ORTHO05D005626 1.2e-22 110.5 155 47.1
BolC8t52045H Brassica oleracea HOM05D004745 ORTHO05D005626 1.2e-22 110.5 155 47.1
BcaB03g14542 Brassica carinata HOM05D004745 ORTHO05D005626 1.5e-22 110.2 87 66.7
Thhalv10008467m.g Eutrema salsugineum HOM05D004745 ORTHO05D005626 1.5e-22 110.2 82 67.1
arahy.Tifrunner.gnm1.ann1.Q3QYYY Arachis hypogaea HOM05D004745 ORTHO05D005626 2.0e-22 109.8 102 57.8
A06p11430 Brassica napus HOM05D004745 ORTHO05D005626 2.0e-22 109.8 86 65.1
BolC5t30092H Brassica oleracea HOM05D004745 ORTHO05D005626 2.0e-22 109.8 87 64.4
BraA06t24321Z Brassica rapa HOM05D004745 ORTHO05D005626 2.0e-22 109.8 87 64.4
ECA234G1027 Erigeron canadensis HOM05D004745 ORTHO05D005626 2.0e-22 109.8 88 61.4
arahy.Tifrunner.gnm1.ann1.EYL5YU Arachis hypogaea HOM05D004745 ORTHO05D005626 2.6e-22 109.4 102 57.8
ECA234G2450 Erigeron canadensis HOM05D004745 ORTHO05D005626 3.4e-22 109.0 77 68.8
Sp1g13740 Schrenkiella parvula HOM05D004745 ORTHO05D005626 3.4e-22 109.0 157 43.3
Aqoxy7G02119 Aquilegia oxysepala HOM05D004745 ORTHO05D005626 4.4e-22 108.6 166 44.6
ECA246G2906 Erigeron canadensis HOM05D004745 ORTHO05D005626 4.4e-22 108.6 86 64.0
Psat7g255920 Pisum sativum HOM05D004745 ORTHO05D005626 4.4e-22 108.6 120 48.3
Lj3g0003662 Lotus japonicus HOM05D004745 ORTHO05D005626 7.5e-22 107.8 80 66.2
C05p13550 Brassica napus HOM05D004745 ORTHO05D005626 1.3e-21 107.1 87 62.1
Lj9C59T9 Lonicera japonica HOM05D004745 ORTHO05D005626 1.3e-21 107.1 71 76.1
BcaC05g25486 Brassica carinata HOM05D004745 ORTHO05D005626 1.7e-21 106.7 87 60.9
TPR.G38663 Trifolium pratense HOM05D004745 ORTHO05D005626 2.2e-21 106.3 119 48.7
arahy.Tifrunner.gnm1.ann1.1TA14L Arachis hypogaea HOM05D004745 ORTHO05D005626 8.3e-21 104.4 83 60.2
arahy.Tifrunner.gnm1.ann1.8B3Q96 Arachis hypogaea HOM05D004745 ORTHO05D005626 8.3e-21 104.4 83 60.2
CDE04G3151 Ceratophyllum demersum HOM05D004745 ORTHO05D005626 1.4e-20 103.6 80 68.8
Medtr2g103430 Medicago truncatula HOM05D004745 ORTHO05D005626 1.8e-20 103.2 86 64.0
Lj3g0018837 Lotus japonicus HOM05D004745 ORTHO05D005626 4.1e-20 102.1 81 60.5
Medtr4g011040 Medicago truncatula HOM05D004745 ORTHO05D005626 4.1e-20 102.1 128 47.7
Psat5g301200 Pisum sativum HOM05D004745 ORTHO05D005626 7.0e-20 101.3 93 60.2
MELO3C017896.2 Cucumis melo HOM05D004745 ORTHO05D005626 9.1e-20 100.9 61 80.3
Lj9A53G21 Lonicera japonica HOM05D004745 ORTHO05D005626 1.2e-19 100.5 68 70.6
ECA240G0712 Erigeron canadensis HOM05D004745 ORTHO05D005626 1.6e-19 100.1 64 73.4
Lalb_Chr14g0373711 Lupinus albus HOM05D004745 ORTHO05D005626 2.7e-19 99.4 85 61.2
MD17G1207400 Malus domestica HOM05D004745 ORTHO05D005626 1.7e-18 96.7 59 78.0
VMungo1080G0321 Vigna mungo HOM05D004745 ORTHO05D005626 1.7e-18 96.7 97 53.6
MD13G1166000 Malus domestica HOM05D004745 ORTHO05D005626 5.0e-18 95.1 59 76.3
TPR.G37193 Trifolium pratense HOM05D004745 ORTHO05D005626 5.0e-18 95.1 92 54.3
Ca_20430_v3 Cicer arietinum L. HOM05D004745 ORTHO05D005626 8.6e-18 94.4 64 70.3
Zm00001eb329240 Zea mays HOM05D004745 ORTHO05D005626 2.5e-17 92.8 96 54.2
CBR_g8594 Chara braunii HOM05D004745 ORTHO05D005626 3.3e-17 92.4 72 66.7
Phvul.005G175900 Phaseolus vulgaris HOM05D004745 ORTHO05D005626 7.2e-17 91.3 79 57.0
Pp3c1_9250 Physcomitrium patens HOM05D004745 ORTHO05D005626 1.2e-16 90.5 64 64.1
Pp3c2_27110 Physcomitrium patens HOM05D004745 ORTHO05D005626 2.8e-16 89.4 75 60.0
Os01g0555800 Oryza sativa ssp. japonica HOM05D004745 ORTHO05D005626 6.1e-16 88.2 63 68.3
Glyma.15G009700 Glycine max HOM05D004745 ORTHO05D005626 1.4e-15 87.0 90 55.6
Medtr2g103420 Medicago truncatula HOM05D004745 ORTHO05D005626 1.8e-15 86.7 91 52.7
TWI18G0786 Tripterygium wilfordii HOM05D004745 ORTHO05D005626 8.9e-15 84.3 153 39.9
Mapoly0061s0037 Marchantia polymorpha HOM05D004745 ORTHO05D005626 1.5e-14 83.6 70 57.1
Mapoly0285s0003 Marchantia polymorpha HOM05D004745 ORTHO05D005626 1.5e-14 83.6 70 57.1
SMO229G0001 Selaginella moellendorffii HOM05D004745 ORTHO05D005626 1.7e-13 80.1 62 61.3
Aqoxy7G02118 Aquilegia oxysepala HOM05D004745 ORTHO05D005626 1.1e-12 77.4 70 61.4
arahy.Tifrunner.gnm1.ann1.9IE0L2 Arachis hypogaea HOM05D004745 ORTHO05D005626 2.4e-12 76.3 60 60.0
arahy.Tifrunner.gnm1.ann1.W67IMC Arachis hypogaea HOM05D004745 ORTHO05D005626 2.4e-12 76.3 60 60.0
BcaC01g05769 Brassica carinata HOM05D004745 ORTHO05D005626 5.0e-10 68.6 60 66.7
Cre03.g172100 Chlamydomonas reinhardtii HOM05D004745 ORTHO05D005626 3.3e-09 65.9 65 50.8
BolC9t52937H Brassica oleracea HOM05D005263 ORTHO05D006891 6.1e-08 61.6 48 68.8
MCO13G487 Micromonas commoda HOM05D004745 ORTHO05D005626 8.0e-08 61.2 62 51.6


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