Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.4e-89 333.2 198 100.0
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 1.5e-75 286.6 198 80.3
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.3e-71 273.5 166 99.4
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 4.9e-63 245.0 196 78.1
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 4.6e-53 211.8 195 65.6
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 7.4e-51 204.5 205 58.0
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 4.8e-50 201.8 205 59.0
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 1.4e-49 200.3 202 59.4
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 8.5e-47 191.0 196 58.7
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 3.2e-46 189.1 209 55.0
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 2.7e-45 186.0 237 53.2
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 6.1e-45 184.9 222 55.4
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 7.9e-45 184.5 222 61.7
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 1.1e-43 180.6 177 62.1
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 3.3e-43 179.1 196 58.7
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 9.7e-43 177.6 218 53.7
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 2.2e-42 176.4 170 60.0
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 1.4e-41 173.7 223 49.8
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 2.4e-41 172.9 199 54.3
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 1.5e-40 170.2 204 48.5
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 2.6e-40 169.5 131 71.0
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 3.4e-40 169.1 195 54.9
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 5.9e-40 168.3 194 53.1
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 1.3e-39 167.2 199 51.8
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 1.7e-39 166.8 133 69.2
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.7e-39 166.8 133 69.2
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.7e-39 166.8 133 69.2
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 1.7e-39 166.8 196 53.1
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 2.9e-39 166.0 195 53.8
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 2.9e-39 166.0 195 53.8
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 2.9e-39 166.0 203 50.2
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 2.9e-39 166.0 142 66.2
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 5.0e-39 165.2 197 53.8
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 5.0e-39 165.2 196 53.1
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 6.5e-39 164.9 127 70.1
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 8.5e-39 164.5 197 53.8
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 1.4e-38 163.7 199 51.3
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 1.4e-38 163.7 191 54.5
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.9e-38 163.3 133 67.7
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 1.9e-38 163.3 169 55.6
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 2.5e-38 162.9 172 58.7
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 2.1e-37 159.8 133 66.2
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 4.7e-37 158.7 202 51.0
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 4.7e-37 158.7 196 53.1
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 5.1e-36 155.2 175 58.3
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 8.8e-36 154.5 225 50.7
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 8.8e-36 154.5 125 65.6
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 1.5e-35 153.7 204 49.5
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 4.4e-35 152.1 127 64.6
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 4.4e-35 152.1 133 62.4
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 4.4e-35 152.1 133 62.4
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 5.7e-35 151.8 189 49.2
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 5.7e-35 151.8 195 50.3
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.3e-34 150.6 194 51.0
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 2.8e-34 149.4 199 47.7
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 1.4e-33 147.1 202 51.0
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 3.1e-33 146.0 197 50.8
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 3.1e-33 146.0 122 64.8
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.2e-32 144.1 205 46.3
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.6e-32 143.7 189 46.6
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 2.0e-32 143.3 196 50.0
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 4.5e-32 142.1 201 51.7
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 5.9e-32 141.7 196 48.5
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 1.3e-31 140.6 189 50.8
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 1.7e-31 140.2 121 61.2
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 3.8e-31 139.0 213 45.1
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 1.1e-30 137.5 169 56.2
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 1.5e-30 137.1 199 49.7
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 1.5e-30 137.1 121 59.5
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 5.5e-30 135.2 151 57.0
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 5.5e-30 135.2 197 48.7
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 6.1e-29 131.7 138 52.9
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 1.4e-28 130.6 196 45.9
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 1.8e-28 130.2 197 41.1
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 4.0e-28 129.0 198 41.9
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 3.3e-27 125.9 120 55.0
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 1.3e-26 124.0 197 49.7
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 3.1e-25 119.4 197 46.2
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 2.7e-24 116.3 196 44.9
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 3.5e-24 115.9 195 45.6
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 5.9e-24 115.2 184 50.0
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 7.7e-24 114.8 189 40.7
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 1.7e-23 113.6 135 54.8
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 1.1e-22 110.9 142 52.1
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 7.2e-22 108.2 61 98.4
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.2e-21 107.5 77 72.7
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.7e-21 106.3 61 96.7
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 4.7e-21 105.5 181 50.3
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 8.0e-21 104.8 77 70.1
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 1.0e-20 104.4 117 53.0
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.3e-20 103.2 104 58.7
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 2.2e-18 96.7 77 61.0
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 2.0e-16 90.1 80 57.5
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 1.3e-15 87.4 103 46.6
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 1.5e-14 84.0 168 42.3
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 7.2e-14 81.6 58 72.4
Nitab4.5_0018136g0010 Nicotiana tabacum HOM05D007357 ORTHO05D009314 7.2e-14 81.6 102 52.0
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 1.5e-11 73.9 50 82.0
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.3e-10 70.9 83 53.0
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.3e-10 70.9 83 53.0
AagrBONN_evm.TU.Sc2ySwM_228.1692 Anthoceros agrestis HOM05D007357 ORTHO05D009314 8.3e-10 68.2 135 31.1
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 1.1e-09 67.8 70 60.0
PGR031G1183 Punica granatum HOM05D007357 ORTHO05D009314 2.9e-07 59.7 50 60.0
Lsat_1_v5_gn_5_56181 Lactuca sativa HOM05D007357 ORTHO05D009314 8.6e-07 58.2 165 30.9


User provided reference genes

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