Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.5e-299 1030.8 498 100.0
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.5e-299 1030.8 498 100.0
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 9.7e-241 836.6 514 77.8
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.9e-236 822.4 506 77.3
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 2.9e-229 798.5 494 76.3
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 1.4e-228 796.2 515 73.6
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.5e-228 795.4 512 73.4
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.5e-225 786.2 515 72.2
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.3e-225 785.0 495 75.4
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 3.3e-225 785.0 515 72.0
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.2e-224 782.3 519 71.9
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 6.3e-224 780.8 514 73.2
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 3.1e-223 778.5 512 72.1
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 5.3e-223 777.7 510 74.1
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.3e-223 777.7 515 71.7
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 5.3e-223 777.7 495 74.7
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 2.0e-222 775.8 512 72.1
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 2.6e-222 775.4 495 74.5
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 7.7e-222 773.9 513 73.7
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 8.5e-221 770.4 495 74.1
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 1.1e-220 770.0 514 73.2
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 1.1e-220 770.0 523 70.7
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 2.1e-219 765.8 515 71.7
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.6e-219 765.0 515 71.5
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 8.0e-219 763.8 515 71.5
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-218 763.1 515 71.3
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-218 763.1 515 71.3
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 2.3e-218 762.3 492 74.0
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 3.9e-218 761.5 497 73.0
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 6.7e-218 760.8 505 71.5
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 6.7e-218 760.8 506 71.5
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 5.7e-217 757.7 506 72.5
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 3.7e-216 755.0 495 72.1
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 4.8e-216 754.6 513 71.3
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 6.3e-216 754.2 527 69.8
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.1e-215 753.4 525 70.7
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.8e-215 752.7 498 72.5
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.4e-215 752.3 483 73.9
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 4.1e-215 751.5 512 72.1
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.2e-214 750.0 498 72.3
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.6e-214 749.6 516 69.4
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 1.0e-213 746.9 581 63.2
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 2.9e-213 745.3 511 69.5
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 2.7e-211 738.8 463 74.1
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 3.6e-211 738.4 515 68.2
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 6.8e-210 734.2 496 69.4
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 6.8e-210 734.2 489 71.4
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 2.6e-209 732.3 545 65.5
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.7e-208 729.6 494 70.9
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 3.7e-208 728.4 497 70.6
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 4.8e-208 728.0 503 69.6
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.8e-207 726.1 492 69.7
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 5.4e-207 724.5 513 67.6
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 7.0e-207 724.2 497 69.8
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 9.1e-207 723.8 494 69.0
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 1.6e-206 723.0 497 68.8
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 2.0e-206 722.6 519 68.2
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 1.0e-205 720.3 490 69.0
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.3e-205 719.9 490 68.8
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.7e-205 719.5 498 68.9
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 2.2e-205 719.2 493 69.6
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 2.2e-205 719.2 495 69.3
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 3.8e-205 718.4 493 69.0
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 5.0e-205 718.0 512 65.6
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 6.5e-205 717.6 495 68.3
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 2.5e-204 715.7 494 68.4
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 3.2e-204 715.3 495 67.9
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 3.2e-204 715.3 495 68.3
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 2.1e-203 712.6 494 70.0
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 1.0e-202 710.3 493 68.4
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.4e-202 709.9 493 68.4
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 4.0e-202 708.4 494 68.8
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 4.0e-202 708.4 510 66.3
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.2e-201 706.8 506 67.4
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 7.5e-201 704.1 494 67.8
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 1.7e-200 703.0 487 69.0
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 2.8e-200 702.2 492 67.9
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 1.1e-199 700.3 492 67.9
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 1.1e-199 700.3 492 67.9
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 4.1e-199 698.4 496 67.9
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.6e-198 696.4 507 65.7
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 2.5e-196 689.1 502 69.5
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 4.2e-196 688.3 498 65.7
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 5.7e-193 677.9 504 63.5
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 2.2e-192 676.0 508 63.0
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 3.2e-191 672.2 499 65.5
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.2e-190 670.2 491 64.6
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 2.7e-190 669.1 497 63.4
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 5.9e-190 667.9 497 63.6
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 5.0e-189 664.8 516 63.2
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.3e-188 662.1 494 65.4
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.6e-187 659.8 438 72.6
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 6.8e-186 654.4 495 63.2
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.2e-184 649.4 512 62.9
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 8.3e-184 647.5 453 68.0
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 3.1e-178 629.0 353 83.0
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 9.5e-172 607.4 492 59.1
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 4.0e-170 602.1 379 74.7
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 4.0e-170 602.1 493 59.2
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 9.2e-167 590.9 480 59.0
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 1.0e-165 587.4 505 58.2
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 9.0e-154 547.7 410 64.9
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 3.0e-117 426.4 257 74.3
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 2.5e-116 423.3 380 53.9
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 4.8e-115 419.1 360 54.7
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.5e-113 414.1 379 51.5
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 4.5e-113 412.5 376 52.9
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.5e-108 397.5 411 46.0
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.0e-77 295.0 173 77.5
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 8.3e-59 232.3 162 65.4
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 1.5e-52 211.5 120 81.7
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 9.9e-36 155.6 314 31.2
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 2.1e-33 147.9 113 63.7
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 1.8e-29 134.8 111 59.5
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.4e-21 108.6 76 59.2
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 3.3e-15 87.4 56 67.9
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 2.4e-13 81.3 62 56.5
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 2.4e-13 81.3 62 56.5
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 2.4e-13 81.3 62 56.5
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 2.3e-08 64.7 58 41.4
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 4.3e-07 60.5 114 27.2


User provided reference genes

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