Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.0e-32 142.9 75 100.0
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 3.7e-19 97.8 78 70.5
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 8.2e-19 96.7 78 70.5
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 1.8e-18 95.5 81 67.9
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 3.1e-18 94.7 78 69.2
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 4.1e-18 94.4 78 71.8
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 4.1e-18 94.4 78 69.2
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 5.3e-18 94.0 78 67.9
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 7.0e-18 93.6 78 67.9
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 7.0e-18 93.6 79 68.4
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 7.0e-18 93.6 78 69.2
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 9.1e-18 93.2 78 69.2
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 1.6e-17 92.4 78 67.9
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 1.6e-17 92.4 78 69.2
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.6e-17 92.4 78 69.2
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 2.0e-17 92.0 78 69.2
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 2.6e-17 91.7 78 65.4
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 3.5e-17 91.3 78 66.7
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 3.5e-17 91.3 80 68.8
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 4.5e-17 90.9 78 69.2
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 4.5e-17 90.9 78 69.2
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 4.5e-17 90.9 78 70.5
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 5.9e-17 90.5 78 64.1
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 5.9e-17 90.5 78 64.1
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 5.9e-17 90.5 79 68.4
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 5.9e-17 90.5 78 66.7
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 5.9e-17 90.5 78 65.4
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 65.4
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 65.4
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 65.4
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 65.4
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 65.4
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 65.4
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 66.7
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 64.1
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 66.7
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 67.9
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 7.7e-17 90.1 78 67.9
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 1.0e-16 89.7 78 65.4
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.0e-16 89.7 78 65.4
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 1.0e-16 89.7 78 64.1
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 1.0e-16 89.7 78 66.7
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 1.0e-16 89.7 78 67.9
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 1.0e-16 89.7 78 65.4
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.0e-16 89.7 71 69.0
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 1.0e-16 89.7 78 62.8
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 1.3e-16 89.4 78 65.4
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 1.3e-16 89.4 78 66.7
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 1.3e-16 89.4 78 65.4
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 1.3e-16 89.4 78 64.1
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 1.3e-16 89.4 78 64.1
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 1.3e-16 89.4 78 65.4
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 1.3e-16 89.4 78 65.4
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 1.7e-16 89.0 78 65.4
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 1.7e-16 89.0 78 64.1
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 2.2e-16 88.6 78 64.1
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 2.2e-16 88.6 78 67.9
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 2.2e-16 88.6 78 64.1
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 2.9e-16 88.2 78 66.7
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 2.9e-16 88.2 78 65.4
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 2.9e-16 88.2 78 64.1
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 5.0e-16 87.4 78 64.1
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 5.0e-16 87.4 78 64.1
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 5.0e-16 87.4 78 66.7
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 6.5e-16 87.0 78 62.8
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 6.5e-16 87.0 80 60.0
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 8.5e-16 86.7 78 61.5
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 8.5e-16 86.7 78 64.1
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 8.5e-16 86.7 78 66.7
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 8.5e-16 86.7 78 66.7
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 8.5e-16 86.7 78 62.8
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 1.5e-15 85.9 78 62.8
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 1.5e-15 85.9 78 60.3
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 2.5e-15 85.1 78 65.4
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 2.5e-15 85.1 78 61.5
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 2.5e-15 85.1 78 61.5
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 2.5e-15 85.1 78 61.5
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 2.5e-15 85.1 78 61.5
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 3.2e-15 84.7 78 65.4
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 3.2e-15 84.7 51 84.3
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 4.2e-15 84.3 78 65.4
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 4.2e-15 84.3 78 65.4
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 4.2e-15 84.3 78 64.1
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 5.5e-15 84.0 78 60.3
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 7.2e-15 83.6 78 60.3
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 7.2e-15 83.6 78 61.5
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 7.2e-15 83.6 80 57.5
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 7.2e-15 83.6 78 61.5
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.2e-14 82.8 78 62.8
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 1.6e-14 82.4 78 59.0
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.6e-14 82.4 76 64.5
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 1.6e-14 82.4 78 61.5
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 2.1e-14 82.0 78 57.7
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 2.1e-14 82.0 71 64.8
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 3.6e-14 81.3 50 78.0
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 6.1e-14 80.5 75 62.7
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 6.1e-14 80.5 78 61.5
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 6.1e-14 80.5 78 59.0
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 8.0e-14 80.1 78 59.0
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 8.0e-14 80.1 78 59.0
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 8.0e-14 80.1 78 57.7
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.4e-13 79.3 78 59.0
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 1.8e-13 79.0 78 57.7
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 4.0e-13 77.8 63 65.1
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 6.8e-13 77.0 78 56.4
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 8.8e-13 76.6 78 53.8
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.0e-12 75.5 78 55.1
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 7.5e-12 73.6 78 53.8
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.2e-11 72.0 48 75.0
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 7.0e-10 67.0 77 50.6
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 2.7e-09 65.1 56 66.1
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 2.2e-08 62.0 83 45.8
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 8.5e-08 60.1 77 45.5
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 8.5e-08 60.1 64 53.1
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 2.5e-07 58.5 39 61.5


User provided reference genes

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