Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 6.3e-108 394.0 188 100.0
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.9e-19 100.1 91 61.5
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 9.6e-16 87.8 103 50.5
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 1.3e-15 87.4 102 54.9
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 1.1e-14 84.3 73 57.5
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 5.8e-13 78.6 49 69.4
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 1.7e-12 77.0 51 68.6
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 3.8e-12 75.9 101 46.5
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 4.9e-12 75.5 53 64.2
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 6.4e-12 75.1 81 50.6
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 1.1e-11 74.3 48 66.7
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.4e-11 73.9 56 62.5
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 2.4e-11 73.2 53 64.2
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 4.2e-11 72.4 52 63.5
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 4.2e-11 72.4 53 62.3
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 5.4e-11 72.0 73 53.4
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 5.4e-11 72.0 73 53.4
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 9.3e-11 71.2 53 62.3
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 9.3e-11 71.2 69 53.6
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 1.2e-10 70.9 49 67.3
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 2.1e-10 70.1 49 63.3
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 2.1e-10 70.1 69 52.2
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 7.9e-10 68.2 51 56.9
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 1.0e-09 67.8 51 64.7
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 1.3e-09 67.4 66 47.0
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 1.3e-09 67.4 49 61.2
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 3.0e-09 66.2 53 56.6
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 3.0e-09 66.2 49 61.2
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 3.9e-09 65.9 72 50.0
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 6.7e-09 65.1 52 57.7
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 6.7e-09 65.1 79 45.6
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 6.7e-09 65.1 53 58.5
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 6.7e-09 65.1 50 66.0
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 8.7e-09 64.7 52 57.7
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 1.5e-08 63.9 53 56.6
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 1.5e-08 63.9 49 63.3
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 1.9e-08 63.5 53 54.7
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 2.5e-08 63.2 91 44.0
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.3e-08 62.8 52 61.5
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 3.3e-08 62.8 81 44.4
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 3.3e-08 62.8 81 44.4
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 4.3e-08 62.4 53 60.4
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 4.3e-08 62.4 63 49.2
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 4.3e-08 62.4 54 59.3
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 4.3e-08 62.4 49 57.1
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 5.6e-08 62.0 102 43.1
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 5.6e-08 62.0 48 58.3
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 7.4e-08 61.6 79 50.6
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 7.4e-08 61.6 53 50.9
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 1.3e-07 60.8 54 55.6
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 1.3e-07 60.8 81 43.2
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 1.3e-07 60.8 49 63.3
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 1.6e-07 60.5 53 52.8
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 1.6e-07 60.5 68 47.1
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 1.6e-07 60.5 54 59.3
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 2.1e-07 60.1 57 61.4
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.8e-07 59.7 53 58.5
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.8e-07 59.7 53 58.5
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 2.8e-07 59.7 54 57.4
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 2.8e-07 59.7 52 57.7
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 2.8e-07 59.7 55 50.9
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 8.1e-07 58.2 48 52.1
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 1.1e-06 57.8 54 53.7
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 1.1e-06 57.8 53 49.1
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 1.4e-06 57.4 55 56.4
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 2.4e-06 56.6 54 51.9
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 5.3e-06 55.5 51 52.9
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 6.9e-06 55.1 54 51.9
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 9.0e-06 54.7 54 53.7
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 9.0e-06 54.7 51 45.1


User provided reference genes

Program Settings