Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023907 Camellia sinensis var. sinensis HOM05D015338 ORTHO05D111484 2.1e-76 288.9 138 100.0
CSS0033001 Camellia sinensis var. sinensis HOM05D015338 ORTHO05D113507 6.7e-51 204.1 158 69.0
CSS0050181 Camellia sinensis var. sinensis HOM05D015338 ORTHO05D109569 1.5e-50 203.0 157 68.2
CSS0043293 Camellia sinensis var. sinensis HOM05D015338 ORTHO05D111115 2.0e-50 202.6 154 68.2
CSS0002845 Camellia sinensis var. sinensis HOM05D015338 ORTHO05D109679 3.3e-50 201.8 153 69.9
CSS0038782 Camellia sinensis var. sinensis HOM05D015338 ORTHO05D112550 1.8e-48 196.1 154 66.2
CSS0004430 Camellia sinensis var. sinensis HOM05D015338 ORTHO05D112138 1.2e-47 193.4 160 67.5
CSS0032811 Camellia sinensis var. sinensis HOM05D015338 ORTHO05D110539 9.4e-45 183.7 158 62.7
CSS0048695 Camellia sinensis var. sinensis HOM05D015338 ORTHO05D108941 5.9e-39 164.5 164 58.5
CSS0014838 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.4e-18 95.1 169 39.6
CSS0000341 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.8e-18 94.7 183 38.8
CSS0004211 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.8e-18 94.7 169 39.6
CSS0005964 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-16 89.4 176 38.6
CSS0042373 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-16 89.4 176 38.6
CSS0023299 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.4e-16 88.2 176 38.1
CSS0047126 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.4e-16 88.2 176 38.1
CSS0025579 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.0e-16 87.8 176 38.1
CSS0003195 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.6e-15 85.1 176 37.5
CSS0041653 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-13 79.3 176 36.9
Rhsim10G0174800 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.8e-10 67.4 59 52.5
Rhsim05G0058900 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.9e-09 65.1 59 50.8
Rhsim02G0232300 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.3e-09 64.3 63 50.8
vmacro02085 Vaccinium macrocarpon HOM05D001037 ORTHO05D000888 5.4e-08 61.6 126 37.3
CSS0003211 Camellia sinensis var. sinensis HOM05D048811 ORTHO05D111204 6.0e-07 58.2 56 53.6
vmacro01894 Vaccinium macrocarpon HOM05D000045 ORTHO05D000067 5.1e-06 55.1 81 39.5
CSS0042872 Camellia sinensis var. sinensis HOM05D048811 ORTHO05D112448 6.6e-06 54.7 50 54.0


User provided reference genes

Program Settings