Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023898 Camellia sinensis var. sinensis HOM05D002651 ORTHO05D002841 1.2e-126 456.4 214 100.0
Dinv08646 Davidia involucrata HOM05D002651 ORTHO05D002841 4.7e-67 258.5 244 59.8
Actinidia13233 Actinidia chinensis HOM05D002651 ORTHO05D002841 3.2e-60 235.7 220 58.6
Actinidia22343 Actinidia chinensis HOM05D002651 ORTHO05D002841 8.3e-56 221.1 227 55.5
Dinv30134 Davidia involucrata HOM05D002651 ORTHO05D002841 3.5e-54 215.7 235 57.0
GSVIVG01035861001 Vitis vinifera HOM05D002651 ORTHO05D002841 2.6e-49 199.5 224 50.4
TAR383G0556 Trochodendron aralioides HOM05D002651 ORTHO05D002841 2.4e-47 193.0 244 48.0
Thecc.09G024600 Theobroma cacao HOM05D002651 ORTHO05D002841 1.8e-42 176.8 224 46.0
Duzib168G0368 Durio zibethinus HOM05D002651 ORTHO05D002841 3.2e-39 166.0 219 44.3
CiPaw.08G011100 Carya illinoinensis HOM05D002651 ORTHO05D002841 5.9e-38 161.8 226 43.8
QL02p021642 Quercus lobata HOM05D002651 ORTHO05D002841 8.6e-37 157.9 223 45.7
COL.COLO4_18861 Corchorus olitorius HOM05D002651 ORTHO05D002841 2.5e-36 156.4 237 42.2
Cfa013143 Carpinus fangiana HOM05D002651 ORTHO05D002841 2.8e-35 152.9 218 44.0
Hma1.2p1_0007F.1_g005330 Hydrangea macrophylla HOM05D002651 ORTHO05D002841 2.8e-35 152.9 217 45.2
Lj7P723T25 Lonicera japonica HOM05D002651 ORTHO05D002841 6.2e-35 151.8 205 45.4
CSS0024589 Camellia sinensis var. sinensis HOM05D002651 ORTHO05D002841 8.0e-35 151.4 208 46.2
Haze_21516 Corylus avellana HOM05D002651 ORTHO05D002841 8.0e-35 151.4 219 43.8
TWI63G1496 Tripterygium wilfordii HOM05D002651 ORTHO05D002841 4.0e-34 149.1 207 44.9
vmacro05177 Vaccinium macrocarpon HOM05D002651 ORTHO05D002841 5.2e-34 148.7 215 47.4
Cc08_g00600 Coffea canephora HOM05D002651 ORTHO05D002841 7.5e-33 144.8 208 41.3
CSS0039697 Camellia sinensis var. sinensis HOM05D002651 ORTHO05D002841 9.8e-33 144.4 231 40.7
MD00G1144400 Malus domestica HOM05D002651 ORTHO05D002841 3.7e-32 142.5 220 43.2
FvH4_2g29010 Fragaria vesca HOM05D002651 ORTHO05D002841 6.4e-32 141.7 230 43.0
FAN15G3098 Fragaria x ananassa HOM05D002651 ORTHO05D002841 6.4e-32 141.7 234 43.2
RcHm_v2.0_Chr6g0297891 Rosa chinensis HOM05D002651 ORTHO05D002841 1.1e-31 141.0 231 42.9
Prupe.1G481300 Prunus persica HOM05D002651 ORTHO05D002841 1.4e-31 140.6 223 42.2
FAN27G0660 Fragaria x ananassa HOM05D002651 ORTHO05D002841 3.2e-31 139.4 231 43.3
FAN24G0990 Fragaria x ananassa HOM05D002651 ORTHO05D002841 4.1e-31 139.0 233 42.9
Nn8g39493 Nelumbo nucifera HOM05D002651 ORTHO05D002841 7.0e-31 138.3 240 39.6
FAN20G1883 Fragaria x ananassa HOM05D002651 ORTHO05D002841 6.0e-30 135.2 234 42.7
Gohir.A05G053700 Gossypium hirsutum HOM05D002651 ORTHO05D002841 1.7e-29 133.7 240 36.7
TWI34G0613 Tripterygium wilfordii HOM05D002651 ORTHO05D002841 3.9e-29 132.5 206 38.8
Potri.018G027100 Populus trichocarpa HOM05D002651 ORTHO05D002841 5.0e-29 132.1 220 37.7
Potri.006G254700 Populus trichocarpa HOM05D002651 ORTHO05D002841 3.3e-28 129.4 218 36.7
Gorai.009G058400 Gossypium raimondii HOM05D002651 ORTHO05D002841 4.3e-28 129.0 217 37.3
Manes.16G122300 Manihot esculenta HOM05D002651 ORTHO05D002841 5.6e-28 128.6 218 39.0
Gohir.D05G057300 Gossypium hirsutum HOM05D002651 ORTHO05D002841 9.5e-28 127.9 217 37.3
Thecc.09G129600 Theobroma cacao HOM05D002651 ORTHO05D002841 1.6e-27 127.1 233 39.1
Cpa.g.sc954.3 Carica papaya HOM05D002651 ORTHO05D002841 2.3e-26 123.2 225 36.9
TAR626G0447 Trochodendron aralioides HOM05D002651 ORTHO05D002841 2.3e-26 123.2 125 51.2
vmacro06143 Vaccinium macrocarpon HOM05D002651 ORTHO05D002841 3.1e-26 122.9 248 35.9
Potri.006G067100 Populus trichocarpa HOM05D002651 ORTHO05D002841 4.0e-26 122.5 232 38.8
Dinv36497 Davidia involucrata HOM05D002651 ORTHO05D002841 5.2e-26 122.1 225 40.0
Ciclev10008661m.g Citrus clementina HOM05D002651 ORTHO05D002841 1.2e-25 120.9 223 37.2
Manes.06G056300 Manihot esculenta HOM05D002651 ORTHO05D002841 4.9e-24 115.5 201 40.3
Duzib187G1449 Durio zibethinus HOM05D002651 ORTHO05D002841 9.2e-23 111.3 167 43.7
Duzib187G1667 Durio zibethinus HOM05D002651 ORTHO05D002841 9.2e-23 111.3 233 37.8
Manes.03G014400 Manihot esculenta HOM05D002651 ORTHO05D002841 9.2e-23 111.3 224 36.6
COL.COLO4_35120 Corchorus olitorius HOM05D002651 ORTHO05D002841 1.2e-22 110.9 220 36.8
QL02p089426 Quercus lobata HOM05D002651 ORTHO05D002841 1.6e-22 110.5 225 36.4
Manes.03G014300 Manihot esculenta HOM05D002651 ORTHO05D002841 2.1e-22 110.2 224 36.6
Gorai.010G115300 Gossypium raimondii HOM05D002651 ORTHO05D002841 7.8e-22 108.2 209 38.3
Peaxi162Scf00870g00021 Petunia axillaris HOM05D002651 ORTHO05D002841 7.8e-22 108.2 211 36.5
Prupe.7G246600 Prunus persica HOM05D002651 ORTHO05D002841 7.8e-22 108.2 230 35.7
Gohir.D06G100366 Gossypium hirsutum HOM05D002651 ORTHO05D002841 1.0e-21 107.8 209 37.8
Ciclev10008357m.g Citrus clementina HOM05D002651 ORTHO05D002841 1.3e-21 107.5 224 34.8
CSS0045754 Camellia sinensis var. sinensis HOM05D002651 ORTHO05D002841 1.7e-21 107.1 202 36.1
Nitab4.5_0000209g0240 Nicotiana tabacum HOM05D002651 ORTHO05D002841 3.9e-21 105.9 208 37.5
ClCG11G003210 Citrullus lanatus HOM05D002651 ORTHO05D002841 6.6e-21 105.1 231 33.8
CSS0026009 Camellia sinensis var. sinensis HOM05D002651 ORTHO05D002841 8.6e-21 104.8 202 35.6
RcHm_v2.0_Chr2g0087961 Rosa chinensis HOM05D002651 ORTHO05D002841 8.6e-21 104.8 230 36.1
Gohir.A06G098300 Gossypium hirsutum HOM05D002651 ORTHO05D002841 1.1e-20 104.4 211 37.9
Gohir.D06G053400 Gossypium hirsutum HOM05D002651 ORTHO05D002841 1.1e-20 104.4 232 35.8
Gorai.010G062400 Gossypium raimondii HOM05D002651 ORTHO05D002841 1.5e-20 104.0 232 36.6
Sabra18G0109400 Salix brachista HOM05D002651 ORTHO05D002841 1.9e-20 103.6 228 36.4
CANSAT25G0322 Cannabis sativa HOM05D002651 ORTHO05D002841 5.6e-20 102.1 200 40.0
Gohir.A06G054500 Gossypium hirsutum HOM05D002651 ORTHO05D002841 7.3e-20 101.7 232 36.6
MD15G1169900 Malus domestica HOM05D002651 ORTHO05D002841 1.2e-19 100.9 229 34.5
Duzib150G1228 Durio zibethinus HOM05D002651 ORTHO05D002841 1.6e-19 100.5 226 34.5
Duzib168G1415 Durio zibethinus HOM05D002651 ORTHO05D002841 2.8e-19 99.8 233 36.1
Sabra06G0199000 Salix brachista HOM05D002651 ORTHO05D002841 2.8e-19 99.8 199 35.2
Hma1.2p1_0018F.1_g012200 Hydrangea macrophylla HOM05D002651 ORTHO05D002841 6.2e-19 98.6 202 37.1
FvH4_1g02850 Fragaria vesca HOM05D002651 ORTHO05D002841 1.1e-18 97.8 235 32.8
FAN19G1540 Fragaria x ananassa HOM05D002651 ORTHO05D002841 1.1e-18 97.8 235 32.8
Nitab4.5_0011210g0010 Nicotiana tabacum HOM05D002651 ORTHO05D002841 1.8e-18 97.1 210 35.7
Atru.chr7.1120 Acer truncatum HOM05D002651 ORTHO05D002841 2.3e-18 96.7 220 34.5
FAN28G1386 Fragaria x ananassa HOM05D002651 ORTHO05D002841 2.3e-18 96.7 235 32.3
MD02G1028200 Malus domestica HOM05D002651 ORTHO05D002841 2.3e-18 96.7 207 37.7
Gorai.001G033800 Gossypium raimondii HOM05D002651 ORTHO05D002841 3.1e-18 96.3 189 37.0
Gohir.D07G032400 Gossypium hirsutum HOM05D002651 ORTHO05D002841 4.0e-18 95.9 189 37.6
Lj3C846T11 Lonicera japonica HOM05D002651 ORTHO05D002841 4.0e-18 95.9 223 35.4
FAN26G1811 Fragaria x ananassa HOM05D002651 ORTHO05D002841 5.2e-18 95.5 232 32.8
CsaV3_2G003030 Cucumis sativus L. HOM05D002651 ORTHO05D002841 6.8e-18 95.1 231 32.0
Gohir.A07G028300 Gossypium hirsutum HOM05D002651 ORTHO05D002841 6.8e-18 95.1 178 37.6
CANSAT11G0052 Cannabis sativa HOM05D002651 ORTHO05D002841 2.0e-17 93.6 228 34.2
CAN.G610.51 Capsicum annuum HOM05D002651 ORTHO05D002841 2.0e-17 93.6 207 34.3
PGSC0003DMG400032780 Solanum tuberosum HOM05D002651 ORTHO05D002841 2.0e-17 93.6 197 34.0
Sed0001806 Sechium edule HOM05D002651 ORTHO05D002841 3.4e-17 92.8 233 32.6
FAN23G0328 Fragaria x ananassa HOM05D002651 ORTHO05D002841 1.3e-16 90.9 205 33.2
Sabra06G0049900 Salix brachista HOM05D002651 ORTHO05D002841 3.8e-16 89.4 205 35.1
MELO3C004457.2 Cucumis melo HOM05D002651 ORTHO05D002841 4.9e-16 89.0 218 33.0
arahy.Tifrunner.gnm1.ann1.DW9T57 Arachis hypogaea HOM05D002651 ORTHO05D002841 1.4e-15 87.4 233 33.9
Dinv41490 Davidia involucrata HOM05D002651 ORTHO05D002841 1.9e-15 87.0 144 39.6
Glyma.13G158300 Glycine max HOM05D002651 ORTHO05D002841 5.4e-15 85.5 224 34.8
Atru.chr7.2429 Acer truncatum HOM05D002651 ORTHO05D002841 7.1e-15 85.1 127 45.7
Oeu012611.1 Olea europaea HOM05D002651 ORTHO05D002841 9.2e-15 84.7 219 32.9
Glyma.17G112800 Glycine max HOM05D002651 ORTHO05D002841 1.2e-14 84.3 225 34.7
Lalb_Chr07g0179101 Lupinus albus HOM05D002651 ORTHO05D002841 1.2e-14 84.3 224 30.4
Lalb_Chr13g0301711 Lupinus albus HOM05D002651 ORTHO05D002841 1.6e-14 84.0 221 33.0
CiPaw.04G173500 Carya illinoinensis HOM05D002651 ORTHO05D002841 4.6e-14 82.4 204 33.8
arahy.Tifrunner.gnm1.ann1.3K6C5E Arachis hypogaea HOM05D002651 ORTHO05D002841 6.0e-14 82.0 229 33.6
CiPaw.03G246700 Carya illinoinensis HOM05D002651 ORTHO05D002841 7.8e-14 81.6 179 38.0
Oeu031009.1 Olea europaea HOM05D002651 ORTHO05D002841 7.8e-14 81.6 217 30.9
DCAR_001510 Daucus carota HOM05D002651 ORTHO05D002841 1.3e-13 80.9 196 31.6
Haze_25545 Corylus avellana HOM05D002651 ORTHO05D002841 1.7e-13 80.5 177 36.2
Medtr4g114900 Medicago truncatula HOM05D002651 ORTHO05D002841 1.7e-13 80.5 217 32.7
VMungo1215G2417 Vigna mungo HOM05D002651 ORTHO05D002841 1.7e-13 80.5 211 33.6
MBI04_g29337_MAGBIO Magnolia biondii HOM05D002651 ORTHO05D002841 2.3e-13 80.1 246 31.7
ClCG08G013390 Citrullus lanatus HOM05D002651 ORTHO05D002841 5.1e-13 79.0 218 31.2
DCAR_017800 Daucus carota HOM05D002651 ORTHO05D002841 1.5e-12 77.4 259 28.2
Eucgr.C04258 Eucalyptus grandis HOM05D002651 ORTHO05D002841 1.9e-12 77.0 224 30.4
Aqoxy7G02269_Aqoxy7G02270 Aquilegia oxysepala HOM05D002651 ORTHO05D002841 4.3e-12 75.9 151 34.4
Lalb_Chr12g0198041 Lupinus albus HOM05D002651 ORTHO05D002841 5.6e-12 75.5 223 31.8
Phvul.003G166900 Phaseolus vulgaris HOM05D002651 ORTHO05D002841 5.6e-12 75.5 212 30.2
Migut.J01220 Erythranthe guttata HOM05D002651 ORTHO05D002841 9.6e-12 74.7 228 30.3
Eucgr.C02771 Eucalyptus grandis HOM05D002651 ORTHO05D002841 1.2e-11 74.3 205 31.7
MSTRG.11614 Avicennia marina HOM05D002651 ORTHO05D002841 2.1e-11 73.6 138 35.5
Cfa003403 Carpinus fangiana HOM05D002651 ORTHO05D002841 2.1e-11 73.6 177 34.5
Psat4g037120 Pisum sativum HOM05D002651 ORTHO05D002841 3.6e-11 72.8 222 32.4
Sopen08g009520 Solanum pennellii HOM05D002651 ORTHO05D002841 3.6e-11 72.8 186 32.8
Lj4g0026849 Lotus japonicus HOM05D002651 ORTHO05D002841 4.7e-11 72.4 219 32.0
PGR142G3561 Punica granatum HOM05D002651 ORTHO05D002841 4.7e-11 72.4 195 32.8
Solyc08g059700.2 Solanum lycopersicum HOM05D002651 ORTHO05D002841 6.2e-11 72.0 203 33.0
Ca_06929_v3 Cicer arietinum L. HOM05D002651 ORTHO05D002841 2.4e-10 70.1 208 31.2
Sc08g0006440 Simmondsia chinensis HOM05D002651 ORTHO05D002841 5.2e-10 68.9 227 28.2
Cpa.g.sc46.22 Carica papaya HOM05D002651 ORTHO05D002841 1.5e-09 67.4 197 33.0
Lsat_1_v5_gn_5_29640 Lactuca sativa HOM05D002651 ORTHO05D002841 4.4e-09 65.9 186 31.7
Cc06_g08230 Coffea canephora HOM05D002651 ORTHO05D002841 2.2e-08 63.5 243 28.0
Oeu029171.1 Olea europaea HOM05D002651 ORTHO05D002841 4.9e-08 62.4 150 34.0
TAR626G0234 Trochodendron aralioides HOM05D002651 ORTHO05D002841 6.4e-08 62.0 72 44.4
Sed0015450 Sechium edule HOM05D002651 ORTHO05D002841 8.4e-08 61.6 187 33.2
AUR62012399 Chenopodium quinoa HOM05D002651 ORTHO05D002841 1.9e-07 60.5 201 29.4
MBI01_g20903_MAGBIO Magnolia biondii HOM05D002651 ORTHO05D002841 2.4e-07 60.1 190 33.2
MELO3C011264.2 Cucumis melo HOM05D002651 ORTHO05D002841 3.2e-07 59.7 219 28.8
Nitab4.5_0000028g0130 Nicotiana tabacum HOM05D002651 ORTHO05D002841 4.2e-07 59.3 176 27.8
Aqoxy7G03209 Aquilegia oxysepala HOM05D002651 ORTHO05D002841 7.1e-07 58.5 145 33.8
HanXRQChr04g0096651 Helianthus annuus HOM05D002651 ORTHO05D002841 4.6e-06 55.8 209 28.7
VMungo1309G0489 Vigna mungo HOM05D002651 ORTHO05D002841 4.6e-06 55.8 130 36.2
SalBow4G0028 Salvia bowleyana HOM05D002651 ORTHO05D002841 7.8e-06 55.1 140 33.6


User provided reference genes

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