Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 5.7e-77 290.8 144 100.0
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.9e-57 225.3 146 78.8
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 5.0e-57 224.6 149 79.9
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 5.0e-57 224.6 149 79.9
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 1.4e-54 216.5 148 76.4
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 1.5e-53 213.0 143 77.6
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 3.7e-52 208.4 146 71.9
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 1.4e-51 206.5 145 73.1
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 3.2e-51 205.3 145 73.1
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 5.4e-51 204.5 147 72.8
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 7.0e-51 204.1 145 72.4
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 7.0e-51 204.1 143 76.9
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 1.2e-50 203.4 145 73.1
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 1.6e-50 203.0 146 73.3
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 2.7e-50 202.2 143 71.3
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 2.7e-50 202.2 142 73.9
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 1.7e-49 199.5 147 68.7
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 2.3e-49 199.1 143 72.7
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 2.3e-49 199.1 147 70.1
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 2.3e-49 199.1 150 68.7
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 3.0e-49 198.7 146 69.2
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 5.0e-49 198.0 141 73.8
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 5.0e-49 198.0 131 77.1
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 5.0e-49 198.0 145 72.4
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 8.6e-49 197.2 140 70.7
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 4.3e-48 194.9 142 69.0
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 4.3e-48 194.9 142 69.0
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 4.3e-48 194.9 145 69.7
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 5.6e-48 194.5 129 78.3
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 7.3e-48 194.1 141 68.8
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 4.7e-47 191.4 141 69.5
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 4.7e-47 191.4 140 70.0
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 4.7e-47 191.4 144 69.4
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 8.0e-47 190.7 148 68.2
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 1.1e-46 190.3 149 69.1
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 1.4e-46 189.9 127 73.2
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 1.8e-46 189.5 143 71.3
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 1.8e-46 189.5 144 68.8
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 2.3e-46 189.1 139 69.1
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 3.1e-46 188.7 144 68.1
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 3.1e-46 188.7 141 69.5
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 3.1e-46 188.7 144 68.8
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 4.0e-46 188.3 147 67.3
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 5.2e-46 188.0 125 77.6
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 5.2e-46 188.0 141 70.9
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 5.2e-46 188.0 151 66.2
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 6.8e-46 187.6 128 75.8
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 8.9e-46 187.2 139 66.9
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 1.5e-45 186.4 140 66.4
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 2.6e-45 185.7 147 64.6
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 3.4e-45 185.3 142 67.6
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 3.4e-45 185.3 142 69.0
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 4.4e-45 184.9 142 66.9
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 9.8e-45 183.7 139 66.2
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 9.8e-45 183.7 127 70.1
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 1.3e-44 183.3 143 67.1
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 1.7e-44 183.0 127 71.7
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 2.2e-44 182.6 141 66.0
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 2.2e-44 182.6 145 64.8
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 4.9e-44 181.4 148 62.8
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 4.9e-44 181.4 148 62.8
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 4.9e-44 181.4 144 66.0
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 6.4e-44 181.0 128 72.7
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 6.4e-44 181.0 145 64.8
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 1.1e-43 180.3 139 65.5
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 1.1e-43 180.3 148 67.6
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.4e-43 179.9 148 62.8
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 1.6e-42 176.4 147 61.9
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 2.7e-42 175.6 128 70.3
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 3.5e-42 175.3 151 66.9
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 3.5e-42 175.3 145 65.5
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 1.0e-41 173.7 140 66.4
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 2.3e-41 172.6 141 61.0
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 2.3e-41 172.6 147 61.9
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 5.0e-41 171.4 134 67.2
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 5.0e-41 171.4 128 69.5
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 1.1e-40 170.2 147 61.2
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 9.5e-40 167.2 143 63.6
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 4.7e-39 164.9 147 61.2
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 4.7e-39 164.9 144 61.8
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 6.2e-39 164.5 141 61.0
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 8.1e-39 164.1 124 71.8
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 2.3e-38 162.5 142 64.1
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 2.3e-38 162.5 147 61.2
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 3.1e-38 162.2 143 60.1
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 5.2e-38 161.4 145 60.7
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 5.2e-38 161.4 133 59.4
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 8.9e-38 160.6 144 61.1
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 2.6e-37 159.1 147 60.5
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 7.5e-37 157.5 141 58.9
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 9.9e-37 157.1 141 58.9
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 1.3e-36 156.8 132 63.6
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 2.9e-36 155.6 143 60.8
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 4.9e-36 154.8 129 65.9
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 8.3e-36 154.1 139 57.6
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 1.1e-35 153.7 130 63.1
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 4.1e-35 151.8 139 57.6
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 9.2e-35 150.6 91 84.6
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 9.2e-35 150.6 130 64.6
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 9.2e-35 150.6 147 58.5
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 1.7e-33 146.4 132 62.1
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 6.6e-33 144.4 129 63.6
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 6.6e-33 144.4 129 63.6
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 8.6e-33 144.1 126 65.1
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 7.3e-32 141.0 126 57.1
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 7.3e-32 141.0 116 70.7
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 9.5e-32 140.6 135 59.3
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 8.1e-31 137.5 123 57.7
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 5.2e-30 134.8 145 53.8
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 6.8e-30 134.4 130 60.0
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 6.8e-30 134.4 126 61.1
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 1.2e-29 133.7 152 53.3
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 2.6e-29 132.5 130 60.0
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 8.4e-28 127.5 133 51.9
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 1.1e-27 127.1 124 58.1
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 1.4e-27 126.7 124 57.3
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 3.2e-27 125.6 123 61.0
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 8.7e-25 117.5 127 52.8
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 5.6e-24 114.8 142 48.6
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 1.2e-23 113.6 90 67.8
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 2.8e-23 112.5 137 46.0
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 1.4e-22 110.2 98 63.3
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 2.0e-21 106.3 151 45.7
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 3.4e-21 105.5 136 44.1
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 1.3e-17 93.6 95 63.2
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 5.1e-17 91.7 103 58.3
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 2.4e-14 82.8 108 48.1
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 1.3e-12 77.0 54 63.0
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 2.7e-10 69.3 89 52.8
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 1.8e-09 66.6 114 41.2
AagrBONN_evm.TU.Sc2ySwM_340.252 Anthoceros agrestis HOM05D005924 ORTHO05D007290 3.0e-09 65.9 109 45.0
TAR371G0507 Trochodendron aralioides HOM05D005924 ORTHO05D007290 2.1e-07 59.7 94 41.5
C09p49910 Brassica napus HOM05D005924 ORTHO05D007290 2.4e-06 56.2 44 59.1


User provided reference genes

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