Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.1e-170 603.2 315 100.0
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 4.5e-159 564.7 320 94.7
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.6e-116 422.2 317 75.1
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 4.9e-113 411.8 323 72.8
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.6e-111 406.8 296 76.0
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 1.1e-109 400.6 318 73.3
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 7.3e-101 371.3 317 67.5
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 6.2e-100 368.2 289 72.7
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.7e-95 352.8 298 69.5
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 1.1e-85 320.9 330 58.2
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 4.3e-85 318.9 334 59.3
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 4.3e-85 318.9 327 59.6
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 3.1e-83 312.8 317 60.3
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 5.2e-83 312.0 319 60.5
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 6.8e-83 311.6 334 59.3
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 8.9e-83 311.2 276 64.5
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 1.5e-82 310.5 317 56.2
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 7.6e-82 308.1 333 57.1
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 1.3e-81 307.4 321 58.9
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 2.2e-81 306.6 326 58.6
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 2.9e-81 306.2 324 56.2
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 6.4e-81 305.1 330 57.3
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.1e-80 302.4 331 58.0
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 6.0e-79 298.5 324 57.4
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 1.3e-78 297.4 320 56.6
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 5.1e-78 295.4 323 56.3
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 2.8e-76 289.7 324 54.9
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.1e-75 287.7 313 58.1
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.4e-75 287.3 326 56.1
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 5.2e-75 285.4 335 54.0
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 6.9e-75 285.0 353 54.1
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 9.0e-75 284.6 341 55.4
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 2.0e-74 283.5 314 57.6
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 4.4e-74 282.3 317 54.9
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 2.2e-73 280.0 348 53.2
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 2.9e-73 279.6 336 53.9
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 2.9e-73 279.6 320 55.9
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 3.8e-73 279.3 324 54.0
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.8e-73 279.3 320 55.9
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 4.9e-73 278.9 309 55.3
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 1.4e-72 277.3 332 53.0
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 3.2e-72 276.2 321 55.5
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.6e-71 273.9 301 56.1
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 2.1e-71 273.5 306 54.9
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.7e-71 273.1 320 55.3
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 7.8e-71 271.6 349 52.1
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 3.9e-70 269.2 277 56.7
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 3.9e-70 269.2 219 69.4
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 8.7e-70 268.1 323 53.9
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 2.5e-69 266.5 326 53.4
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 2.5e-69 266.5 332 53.9
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 4.3e-69 265.8 345 52.8
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 4.3e-69 265.8 337 52.8
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.6e-68 263.8 323 52.3
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.6e-68 263.8 327 50.8
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 1.6e-68 263.8 342 50.9
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 1.6e-68 263.8 320 53.4
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 2.8e-68 263.1 313 51.4
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 3.6e-68 262.7 346 48.8
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 8.1e-68 261.5 314 54.1
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 1.1e-67 261.2 321 52.3
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.4e-67 260.8 315 52.4
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 1.2e-66 257.7 321 52.3
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.5e-66 257.3 308 52.3
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 2.6e-66 256.5 327 50.2
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 3.4e-66 256.1 320 51.6
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.3e-65 254.2 292 54.8
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 2.9e-65 253.1 324 51.5
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 6.4e-65 251.9 336 50.0
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 8.4e-65 251.5 319 50.2
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 8.4e-65 251.5 321 53.0
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 8.4e-65 251.5 390 46.4
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 1.1e-64 251.1 352 48.9
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 3.2e-64 249.6 313 50.5
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 7.1e-64 248.4 332 51.5
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 2.1e-63 246.9 346 48.8
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 3.5e-63 246.1 324 50.6
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.5e-63 246.1 325 52.0
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 1.8e-62 243.8 325 50.5
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 2.3e-62 243.4 357 48.2
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 3.9e-62 242.7 292 53.4
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 6.7e-62 241.9 324 50.9
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.1e-61 241.1 273 53.8
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 2.5e-61 240.0 322 49.4
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 3.3e-61 239.6 335 49.3
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 5.6e-61 238.8 327 51.1
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 9.6e-61 238.0 340 48.2
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.6e-60 237.3 340 48.2
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 2.1e-60 236.9 346 46.8
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 6.2e-60 235.3 324 50.3
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 8.1e-60 235.0 278 55.0
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 8.1e-60 235.0 220 60.9
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 6.9e-59 231.9 330 49.4
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.0e-58 230.3 324 49.7
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 5.8e-58 228.8 384 44.8
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 1.1e-56 224.6 292 53.4
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 2.4e-56 223.4 322 48.4
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 4.2e-56 222.6 502 37.5
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.2e-55 221.1 314 49.4
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 2.7e-55 219.9 315 49.2
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 1.5e-53 214.2 317 46.4
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.5e-53 214.2 271 50.6
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 4.3e-53 212.6 256 53.9
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 9.6e-53 211.5 347 45.5
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.3e-52 211.1 317 48.3
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 8.2e-52 208.4 297 49.2
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 2.4e-51 206.8 312 46.8
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 3.1e-51 206.5 293 49.1
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.2e-50 204.5 309 47.9
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 2.6e-50 203.4 319 45.8
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 5.8e-50 202.2 219 60.3
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 5.8e-50 202.2 328 46.6
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 1.3e-49 201.1 352 42.3
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 3.8e-49 199.5 246 52.4
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 1.1e-43 181.4 260 50.0
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 1.8e-38 164.1 321 41.1
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 2.3e-38 163.7 254 46.1
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 2.2e-36 157.1 200 49.5
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 6.3e-36 155.6 184 53.3
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 1.1e-35 154.8 277 39.4
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 2.0e-34 150.6 112 74.1
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 2.6e-34 150.2 281 43.1
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 5.0e-33 146.0 114 71.1
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 4.7e-31 139.4 88 83.0
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 8.2e-28 128.6 175 52.0
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 8.2e-28 128.6 114 64.0
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 2.9e-25 120.2 103 60.2
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 4.2e-24 116.3 225 43.1
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.8e-22 110.9 200 42.0
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 2.8e-20 103.6 181 39.2
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 2.0e-18 97.4 82 61.0
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 3.2e-16 90.1 316 32.6
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 1.2e-15 88.2 87 52.9
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 2.3e-14 84.0 184 36.4
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 2.3e-14 84.0 184 36.4
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 3.0e-14 83.6 68 67.6
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 1.5e-13 81.3 188 34.6
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 3.7e-12 76.6 204 32.4
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 2.9e-09 67.0 66 56.1
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 3.8e-09 66.6 50 66.0
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 9.4e-08 62.0 186 32.8


User provided reference genes

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