Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 4.0e-120 434.9 235 100.0
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 2.2e-78 296.2 224 71.9
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 2.9e-78 295.8 221 72.4
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 3.5e-76 288.9 243 67.1
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 9.0e-72 274.2 237 63.3
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 1.5e-71 273.5 247 63.2
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.5e-71 273.5 225 68.4
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.9e-70 269.2 233 65.7
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 5.0e-70 268.5 234 60.7
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.9e-69 266.5 236 61.9
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 2.5e-69 266.2 230 62.6
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 1.6e-68 263.5 217 64.5
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 4.6e-68 261.9 234 64.1
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 6.1e-68 261.5 242 59.5
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 6.1e-68 261.5 232 60.8
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.0e-67 260.8 234 62.0
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.0e-67 260.8 199 70.4
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 1.0e-67 260.8 232 63.4
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 1.3e-67 260.4 231 61.5
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.3e-67 260.4 224 60.3
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 2.3e-67 259.6 232 62.5
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.9e-67 258.8 240 60.8
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 5.1e-67 258.5 241 59.8
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 8.7e-67 257.7 247 62.3
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 8.7e-67 257.7 234 61.5
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 8.7e-67 257.7 241 63.5
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 8.7e-67 257.7 199 68.8
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.1e-66 257.3 239 60.3
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.1e-66 257.3 215 64.7
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.9e-66 256.5 240 60.8
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 7.4e-66 254.6 240 60.4
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.2e-65 253.1 240 60.4
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 2.2e-65 253.1 232 62.5
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 6.3e-65 251.5 238 63.0
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 6.9e-64 248.1 238 59.2
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.2e-63 247.3 239 58.2
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 1.5e-63 246.9 240 59.2
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.0e-62 244.2 243 58.0
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 5.0e-62 241.9 241 57.3
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 5.0e-62 241.9 231 57.6
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 6.5e-62 241.5 245 57.6
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 5.5e-61 238.4 230 59.1
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.6e-60 236.9 237 58.2
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.6e-60 236.9 236 57.6
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.6e-60 235.7 236 54.7
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 6.1e-60 235.0 242 57.9
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 7.9e-60 234.6 237 54.0
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 1.0e-59 234.2 242 56.6
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 2.3e-59 233.0 242 55.8
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.5e-58 230.3 239 56.9
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 2.0e-58 229.9 237 56.1
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 2.0e-58 229.9 234 55.6
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 5.7e-58 228.4 240 53.3
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 1.3e-57 227.3 236 54.2
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.3e-57 227.3 244 57.0
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.3e-57 227.3 210 58.6
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.2e-57 226.5 239 54.8
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 2.8e-57 226.1 241 56.0
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.7e-57 225.7 232 55.6
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 6.3e-57 224.9 230 53.9
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 8.2e-57 224.6 232 58.2
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 1.4e-56 223.8 223 57.8
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 1.8e-56 223.4 236 54.7
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 6.9e-56 221.5 225 56.4
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 6.9e-56 221.5 215 59.1
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.2e-55 220.7 235 54.0
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.2e-55 220.7 247 55.1
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.5e-55 220.3 238 52.9
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 2.6e-55 219.5 266 51.9
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 7.7e-55 218.0 233 55.4
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 7.7e-55 218.0 238 54.6
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 1.3e-54 217.2 235 51.1
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 1.3e-54 217.2 235 51.1
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 6.5e-54 214.9 230 52.2
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.1e-53 214.2 236 52.1
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.9e-53 213.4 209 55.5
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 2.5e-53 213.0 239 52.3
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 5.5e-53 211.8 213 56.8
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 1.2e-52 210.7 236 52.5
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 1.6e-52 210.3 240 52.9
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.6e-52 210.3 199 61.8
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 4.7e-52 208.8 232 52.6
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.0e-51 207.6 239 50.6
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.0e-51 207.6 185 58.4
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 1.4e-51 207.2 221 52.0
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 3.9e-51 205.7 235 51.5
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 3.9e-51 205.7 198 54.5
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 8.8e-51 204.5 217 52.1
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 2.0e-50 203.4 208 51.9
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 2.6e-50 203.0 228 53.9
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 9.7e-50 201.1 234 49.6
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 9.7e-50 201.1 205 54.6
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 9.7e-50 201.1 226 52.2
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 1.7e-49 200.3 228 50.9
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 4.8e-49 198.7 237 51.5
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 8.2e-49 198.0 230 52.2
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 8.2e-49 198.0 275 46.9
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.1e-48 197.6 210 52.9
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 1.1e-48 197.6 237 49.4
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 1.4e-48 197.2 237 51.1
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 1.4e-48 197.2 237 51.1
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 1.8e-48 196.8 231 50.6
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 2.4e-48 196.4 196 58.7
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 4.1e-48 195.7 209 56.0
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 5.3e-48 195.3 237 50.6
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 5.0e-46 188.7 244 47.5
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 6.5e-46 188.3 277 45.5
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 8.5e-46 188.0 182 54.9
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 1.5e-45 187.2 235 48.5
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 3.2e-45 186.0 152 66.4
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 4.2e-45 185.7 185 57.3
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 3.6e-44 182.6 185 56.8
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 3.6e-44 182.6 185 56.8
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 4.7e-44 182.2 187 56.1
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 6.1e-44 181.8 187 56.1
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 6.1e-44 181.8 198 53.0
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 5.2e-43 178.7 181 56.4
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 1.1e-37 161.0 196 50.0
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 4.0e-35 152.5 210 46.2
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.2e-34 151.0 237 46.8
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 4.4e-34 149.1 232 44.0
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 1.5e-29 134.0 144 57.6
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 2.2e-25 120.2 229 38.0
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 2.1e-20 103.6 235 39.6
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 4.0e-19 99.4 70 72.9
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 8.9e-19 98.2 155 43.9
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.2e-16 89.7 175 38.3
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 5.4e-16 89.0 109 49.5
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.0e-06 58.2 51 52.9
Oeu016600.1 Olea europaea HOM05D006151 ORTHO05D007487 1.0e-06 58.2 56 48.2


User provided reference genes

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