Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023837 Camellia sinensis var. sinensis HOM05D000044 ORTHO05D109785 6.1e-103 377.5 189 100.0
MD11G1015700 Malus domestica HOM05D000044 ORTHO05D246488 2.2e-07 60.1 69 52.2
QL01p009964 Quercus lobata HOM05D000044 ORTHO05D000051 3.7e-07 59.3 132 40.2
Nn5g29709 Nelumbo nucifera HOM05D000039 ORTHO05D000815 4.8e-07 58.9 127 32.3
Manes.13G103100 Manihot esculenta HOM05D000039 ORTHO05D000366 6.3e-07 58.5 166 33.1
SEGI_04386 Sequoiadendron giganteum HOM05D000039 ORTHO05D000370 6.3e-07 58.5 132 34.8
Atru.chr3.2131 Acer truncatum HOM05D000044 ORTHO05D000051 1.1e-06 57.8 96 40.6
Atru.chr3.2137 Acer truncatum HOM05D000044 ORTHO05D000051 1.1e-06 57.8 96 40.6
QL01p010016 Quercus lobata HOM05D000044 ORTHO05D000051 1.1e-06 57.8 132 39.4
Rhsim13G0227600 Rhododendron simsii HOM05D000044 ORTHO05D000051 1.1e-06 57.8 110 38.2
Ah.06g193120 Amaranthus hybridus HOM05D000044 ORTHO05D000051 1.4e-06 57.4 78 48.7
Mapoly0220s0003 Marchantia polymorpha HOM05D000039 ORTHO05D000366 1.4e-06 57.4 189 28.6
Os10g0536700 Oryza sativa ssp. japonica HOM05D000039 ORTHO05D000815 1.4e-06 57.4 114 36.8
Prupe.6G013800 Prunus persica HOM05D000044 ORTHO05D000051 1.4e-06 57.4 99 38.4
CSS0050106 Camellia sinensis var. sinensis HOM05D000044 ORTHO05D000051 2.4e-06 56.6 83 44.6
Gohir.A08G078800 Gossypium hirsutum HOM05D000044 ORTHO05D000051 2.4e-06 56.6 97 41.2
Gohir.D08G088500 Gossypium hirsutum HOM05D000044 ORTHO05D000051 2.4e-06 56.6 97 41.2
Gorai.004G093000 Gossypium raimondii HOM05D000044 ORTHO05D000051 2.4e-06 56.6 97 41.2
Hund07563 Selenicereus undatus HOM05D000044 ORTHO05D000051 2.4e-06 56.6 104 40.4
TWI32G0883 Tripterygium wilfordii HOM05D000044 ORTHO05D000051 2.4e-06 56.6 96 39.6
EL10Ac4g10335 Beta vulgaris HOM05D000044 ORTHO05D000051 3.1e-06 56.2 80 47.5
Lsat_1_v5_gn_2_101400 Lactuca sativa HOM05D000044 ORTHO05D000051 3.1e-06 56.2 110 37.3
MBI18_g06809_MAGBIO Magnolia biondii HOM05D000039 ORTHO05D000366 3.1e-06 56.2 115 33.0
Thecc.09G216700 Theobroma cacao HOM05D000044 ORTHO05D000051 3.1e-06 56.2 97 42.3
Zm00001eb022050 Zea mays HOM05D000039 ORTHO05D000815 3.1e-06 56.2 104 40.4
AagrBONN_evm.TU.Sc2ySwM_362.2780 Anthoceros agrestis HOM05D000039 ORTHO05D000815 4.1e-06 55.8 109 35.8
Oeu038836.1 Olea europaea HOM05D000044 ORTHO05D000051 4.1e-06 55.8 87 41.4
Dinv09745 Davidia involucrata HOM05D000044 ORTHO05D000051 5.3e-06 55.5 84 45.2
Hma1.2p1_3019F.1_g331740 Hydrangea macrophylla HOM05D000039 ORTHO05D000815 5.3e-06 55.5 76 40.8
Nn2g15699 Nelumbo nucifera HOM05D000044 ORTHO05D000051 5.3e-06 55.5 80 46.2
Potri.003G214500 Populus trichocarpa HOM05D000044 ORTHO05D000051 5.3e-06 55.5 110 36.4
Solyc01g015080.3 Solanum lycopersicum HOM05D000044 ORTHO05D000051 5.3e-06 55.5 124 35.5
TAR633G2717 Trochodendron aralioides HOM05D000044 ORTHO05D000051 5.3e-06 55.5 84 44.0
Cc01_g02780 Coffea canephora HOM05D000044 ORTHO05D000051 6.9e-06 55.1 108 38.9
Haze_23006 Corylus avellana HOM05D000044 ORTHO05D000051 6.9e-06 55.1 86 43.0
MD03G1014500 Malus domestica HOM05D000044 ORTHO05D000051 6.9e-06 55.1 84 44.0
Manes.15G103900 Manihot esculenta HOM05D000044 ORTHO05D000051 6.9e-06 55.1 109 38.5
Prupe.6G013700 Prunus persica HOM05D000044 ORTHO05D000051 6.9e-06 55.1 84 44.0
Duzib170G0357 Durio zibethinus HOM05D000044 ORTHO05D000051 9.0e-06 54.7 111 38.7
Lj6g0021815 Lotus japonicus HOM05D000039 ORTHO05D000370 9.0e-06 54.7 142 33.1
SEGI_31839 Sequoiadendron giganteum HOM05D000044 ORTHO05D000051 9.0e-06 54.7 109 37.6


User provided reference genes

Program Settings