Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 9.1e-59 229.9 109 100.0
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 8.5e-49 196.8 129 81.4
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 4.2e-48 194.5 128 81.2
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 6.1e-47 190.7 129 79.1
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.0e-38 163.3 125 74.4
CSS0036547 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 4.2e-32 141.4 115 70.4
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.8e-23 112.1 88 70.5
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 6.3e-20 100.9 88 62.5
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 8.3e-20 100.5 85 63.5
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 8.3e-20 100.5 85 63.5
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 4.1e-19 98.2 84 61.9
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 1.6e-18 96.3 88 59.1
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 2.0e-18 95.9 89 59.6
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 2.7e-18 95.5 88 59.1
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 2.7e-18 95.5 88 60.2
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 2.7e-18 95.5 89 57.3
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 3.5e-18 95.1 86 59.3
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 3.5e-18 95.1 88 58.0
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 4.5e-18 94.7 88 60.2
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 1.7e-17 92.8 90 56.7
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.7e-17 92.8 87 59.8
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 2.9e-17 92.0 88 55.7
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 3.8e-17 91.7 83 59.0
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 3.8e-17 91.7 89 57.3
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 3.8e-17 91.7 87 58.6
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 5.0e-17 91.3 84 58.3
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 6.6e-17 90.9 84 57.1
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 1.5e-16 89.7 82 58.5
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 1.9e-16 89.4 80 58.8
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 2.5e-16 89.0 83 56.6
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 4.3e-16 88.2 83 56.6
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 5.6e-16 87.8 80 60.0
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 5.6e-16 87.8 83 55.4
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 7.3e-16 87.4 82 58.5
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 7.3e-16 87.4 82 57.3
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 1.2e-15 86.7 83 55.4
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 1.2e-15 86.7 83 55.4
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 1.6e-15 86.3 87 54.0
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 1.6e-15 86.3 84 56.0
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 1.6e-15 86.3 82 57.3
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 2.8e-15 85.5 80 57.5
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 2.8e-15 85.5 80 52.5
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 2.8e-15 85.5 80 58.8
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 4.7e-15 84.7 88 54.5
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 4.7e-15 84.7 86 54.7
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 6.1e-15 84.3 88 53.4
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 6.1e-15 84.3 86 53.5
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 1.0e-14 83.6 80 55.0
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 1.0e-14 83.6 93 52.7
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 1.0e-14 83.6 82 54.9
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 1.4e-14 83.2 80 57.5
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 1.8e-14 82.8 80 53.8
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 3.0e-14 82.0 88 53.4
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 3.0e-14 82.0 88 53.4
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 3.0e-14 82.0 80 58.8
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 3.0e-14 82.0 97 51.5
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 4.0e-14 81.6 86 54.7
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 4.0e-14 81.6 90 51.1
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 6.8e-14 80.9 87 54.0
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 8.9e-14 80.5 81 51.9
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 8.9e-14 80.5 80 53.8
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 8.9e-14 80.5 88 51.1
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.2e-13 80.1 81 54.3
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 1.5e-13 79.7 97 50.5
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 2.0e-13 79.3 87 51.7
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 2.0e-13 79.3 80 56.2
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 2.6e-13 79.0 81 54.3
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 2.6e-13 79.0 92 48.9
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 3.4e-13 78.6 86 53.5
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 3.4e-13 78.6 97 49.5
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 3.4e-13 78.6 79 54.4
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 4.4e-13 78.2 81 50.6
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 4.4e-13 78.2 87 51.7
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 4.4e-13 78.2 87 51.7
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 4.4e-13 78.2 79 53.2
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 9.8e-13 77.0 80 55.0
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 9.8e-13 77.0 89 48.3
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 1.3e-12 76.6 79 53.2
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.2e-12 75.9 82 50.0
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 2.2e-12 75.9 81 53.1
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 2.9e-12 75.5 80 52.5
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 2.9e-12 75.5 80 55.0
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 2.9e-12 75.5 83 53.0
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 4.9e-12 74.7 87 50.6
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 4.9e-12 74.7 80 53.8
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 6.4e-12 74.3 87 50.6
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 6.4e-12 74.3 87 50.6
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 6.4e-12 74.3 87 50.6
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 1.4e-11 73.2 77 53.2
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 4.1e-11 71.6 46 67.4
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 5.4e-11 71.2 83 48.2
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 3.5e-10 68.6 97 41.2
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 6.0e-10 67.8 99 42.4
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 6.0e-10 67.8 83 47.0
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 3.9e-09 65.1 80 48.8
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 3.9e-09 65.1 80 48.8
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 3.9e-09 65.1 80 48.8
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 5.0e-09 64.7 82 46.3
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 6.6e-09 64.3 80 48.8
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 8.6e-09 63.9 43 65.1
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 1.1e-08 63.5 82 43.9
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 7.3e-08 60.8 93 36.6
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 2.1e-07 59.3 60 55.0
CSS0022791 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 8.0e-07 57.4 40 75.0
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 1.1e-06 57.0 97 40.2
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 2.3e-06 55.8 40 72.5
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 2.3e-06 55.8 40 72.5
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 4.0e-06 55.1 74 45.9


User provided reference genes

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