Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023820 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.1e-62 241.5 114 100.0
CSS0003221 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-51 206.1 114 86.0
CSS0006887 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.5e-51 205.3 114 82.5
CSS0002147 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.7e-47 191.4 114 82.5
CSS0015259 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.9e-47 191.0 118 78.8
CSS0010240 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.4e-46 188.7 114 76.3
CSS0013543 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.1e-46 188.0 114 78.1
CSS0023038 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.1e-43 179.9 116 75.9
CSS0004806 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.2e-42 176.4 114 72.8
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.7e-34 147.9 109 61.5
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 6.2e-34 147.5 109 61.5
CSS0009299 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 5.2e-33 144.4 112 60.7
CSS0004654 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.9e-33 143.7 112 57.1
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.9e-33 143.7 112 59.8
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-32 142.9 112 58.9
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.1e-29 132.5 113 57.5
CSS0014323 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.7e-29 132.1 109 56.9
CSS0030203 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.6e-28 127.1 109 57.8
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 1.1e-27 126.7 114 56.1
CSS0013856 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.6e-27 123.6 108 56.5
CSS0019902 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.1e-26 122.5 109 56.0
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 4.0e-25 118.2 94 60.6
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 5.2e-25 117.9 100 57.0
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 4.9e-23 111.3 110 49.1
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 4.9e-23 111.3 110 49.1
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 8.4e-23 110.5 109 45.0
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.1e-22 110.2 87 58.6
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 7.8e-21 104.0 114 43.0
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 7.8e-21 104.0 114 43.0
Hma1.2p1_0622F.1_g190870 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.7e-20 102.8 87 56.3
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 2.3e-20 102.4 109 49.5
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.3e-20 102.4 109 47.7
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 3.0e-20 102.1 94 53.2
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 8.7e-20 100.5 95 52.6
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 8.7e-20 100.5 91 53.8
CSS0005100 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-19 99.8 109 49.5
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 1.5e-19 99.8 94 52.1
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 1.3e-18 96.7 105 43.8
Atru.chr1.3004 Acer truncatum HOM05D000593 ORTHO05D002268 2.1e-18 95.9 109 46.8
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 3.6e-18 95.1 94 48.9
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 1.8e-17 92.8 106 42.5
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 3.1e-17 92.0 97 45.4
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-16 89.7 95 47.4
RcHm_v2.0_Chr7g0206281 Rosa chinensis HOM05D000593 ORTHO05D002268 3.4e-16 88.6 78 55.1
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 4.5e-16 88.2 117 44.4
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 2.2e-15 85.9 95 45.3
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 2.2e-15 85.9 95 45.3
TWI53G1229 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.2e-15 85.9 94 41.5
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 3.8e-15 85.1 71 53.5
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-14 83.6 94 40.4
TWI75G1634 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 1.1e-14 83.6 110 34.5
TWI15G0761 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.9e-14 82.8 107 42.1
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.4e-14 82.4 94 42.6
TWI38G0080 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.2e-14 82.0 94 38.3
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.1e-14 80.9 111 33.3
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 3.5e-13 78.6 105 38.1
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 3.5e-13 78.6 105 38.1
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 6.0e-13 77.8 96 40.6
TWI12G0364 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.3e-12 76.6 80 47.5
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.3e-12 76.6 108 36.1
TWI59G1482 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-12 75.5 93 41.9
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.7e-12 74.3 111 34.2
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 6.7e-12 74.3 93 39.8
FvH4_5g13892 Fragaria vesca HOM05D000593 ORTHO05D002268 8.7e-12 73.9 67 50.7
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 1.1e-11 73.6 95 38.9
FvH4_7g19111 Fragaria vesca HOM05D000593 ORTHO05D002268 1.1e-11 73.6 118 37.3
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-11 73.6 93 39.8
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-11 73.6 111 34.2
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 1.5e-11 73.2 118 37.3
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.3e-11 72.0 111 33.3
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 7.4e-11 70.9 92 40.2
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.6e-11 70.5 93 37.6
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 1.3e-10 70.1 95 41.1
TWI31G0531 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.3e-10 70.1 80 46.2
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 1.3e-10 70.1 110 36.4
PSO190G0002 Papaver somniferum HOM05D013875 ORTHO05D002268 2.1e-10 69.3 99 36.4
PSO601G0026 Papaver somniferum HOM05D013875 ORTHO05D002268 2.1e-10 69.3 99 36.4
TWI36G1645 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.1e-10 69.3 96 38.5
TWI38G1252 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.1e-10 69.3 93 38.7
TWI81G0284 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.1e-10 69.3 81 46.9
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 2.8e-10 68.9 99 36.4
Ca_13826_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 4.8e-10 68.2 73 45.2
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 6.2e-10 67.8 98 40.8
vmacro21289 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 6.2e-10 67.8 98 40.8
SGA_v2.0_scaffold106G30618 Striga asiatica HOM05D000593 ORTHO05D002268 8.1e-10 67.4 91 39.6
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 8.1e-10 67.4 91 39.6
SGA_v2.0_scaffold17G08149 Striga asiatica HOM05D000593 ORTHO05D002268 8.1e-10 67.4 91 39.6
SGA_v2.0_scaffold1G00721 Striga asiatica HOM05D000593 ORTHO05D002268 8.1e-10 67.4 91 39.6
SGA_v2.0_scaffold22G09752 Striga asiatica HOM05D000593 ORTHO05D002268 8.1e-10 67.4 91 39.6
SGA_v2.0_scaffold286G47098 Striga asiatica HOM05D000164 ORTHO05D000096 8.1e-10 67.4 91 39.6
SGA_v2.0_scaffold31G12776 Striga asiatica HOM05D000593 ORTHO05D002268 8.1e-10 67.4 91 39.6
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 8.1e-10 67.4 91 39.6
TWI56G1292 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 8.1e-10 67.4 111 29.7
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 1.4e-09 66.6 91 42.9
TWI23G0100 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.4e-09 66.6 93 38.7
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 3.1e-09 65.5 92 39.1
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 1.2e-08 63.5 58 56.9
Ca_14497_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.2e-08 63.5 94 34.0
FvH4_6g38841 Fragaria vesca HOM05D003216 ORTHO05D002268 1.2e-08 63.5 91 41.8
TWI63G0981 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.2e-08 63.5 113 31.9
TWI81G0406 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.2e-08 63.5 93 37.6
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.5e-08 63.2 94 35.1
Oeu064531.1 Olea europaea HOM05D000593 ORTHO05D002268 1.5e-08 63.2 56 57.1
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.0e-08 62.8 58 48.3
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 2.0e-08 62.8 122 35.2
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.6e-08 62.4 58 46.6
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.4e-08 62.0 58 48.3
Oeu028054.1 Olea europaea HOM05D000593 ORTHO05D002268 3.4e-08 62.0 56 53.6
TPR.G40224 Trifolium pratense HOM05D003216 ORTHO05D002268 3.4e-08 62.0 93 36.6
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 5.8e-08 61.2 55 56.4
TWI31G0510 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 5.8e-08 61.2 71 45.1
TWI75G0109 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 5.8e-08 61.2 93 34.4
TWI38G0853 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.9e-08 60.5 57 47.4
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 1.3e-07 60.1 58 53.4
TWI32G0254 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.3e-07 60.1 94 33.0
TWI73G0096 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-07 60.1 57 50.9
Aqoxy3G00378 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 1.7e-07 59.7 71 43.7
Aqoxy7G02090 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.7e-07 59.7 76 36.8
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.2e-07 59.3 58 48.3
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 2.2e-07 59.3 92 34.8
Ca_14741_v3 Cicer arietinum L. HOM05D003326 ORTHO05D001185 2.2e-07 59.3 92 34.8
HanXRQChr05g0151291 Helianthus annuus HOM05D000593 ORTHO05D000562 2.2e-07 59.3 99 31.3
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.9e-07 58.9 58 48.3
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.9e-07 58.9 59 47.5
ECA233G2800 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.9e-07 58.9 94 31.9
PSO729G0006 Papaver somniferum HOM05D013875 ORTHO05D002268 2.9e-07 58.9 106 34.0
CSS0038609 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.8e-07 58.5 69 39.1
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 4.9e-07 58.2 125 36.8
TWI59G0546 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.4e-07 57.8 67 43.3
TWI81G0336 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 6.4e-07 57.8 81 42.0
TWI59G1088 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 8.4e-07 57.4 76 32.9
Ca_25321_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.1e-06 57.0 92 33.7
ECA248G1709 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.1e-06 57.0 94 31.9
Oeu035640.1 Olea europaea HOM05D000593 ORTHO05D000562 1.1e-06 57.0 56 51.8
PSO729G0017 Papaver somniferum HOM05D013875 ORTHO05D002268 1.9e-06 56.2 93 33.3
TWI56G0917 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.9e-06 56.2 58 50.0
TWI59G1113 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.2e-06 55.1 49 51.0
Ca_15409_v3 Cicer arietinum L. HOM05D000768 ORTHO05D000665 7.1e-06 54.3 58 46.6
Ca_29880_v3 Cicer arietinum L. HOM05D000768 ORTHO05D000665 7.1e-06 54.3 58 46.6
ECA233G1330 Erigeron canadensis HOM05D000593 ORTHO05D000562 7.1e-06 54.3 94 30.9


User provided reference genes

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