Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023792 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.6e-65 250.4 161 100.0
CSS0013580 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-64 248.8 161 94.4
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-64 248.8 161 94.4
CSS0017473 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-64 248.8 161 94.4
CSS0021320 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-64 248.8 161 94.4
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.1e-64 247.3 161 93.8
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-63 246.9 161 93.8
CSS0004257 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-63 246.5 161 93.8
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-62 243.0 161 93.2
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-62 243.0 161 93.2
CSS0014280 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D024710 2.9e-61 238.8 161 82.0
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.1e-47 192.2 99 99.0
CSS0010221 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D020238 1.3e-26 123.6 162 55.6
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.2e-21 106.3 160 46.9
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.2e-21 106.3 160 46.9
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.2e-20 102.4 158 40.5
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.1e-19 98.2 158 40.5
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.1e-19 98.2 158 40.5
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 7.9e-19 97.8 175 39.4
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 7.9e-19 97.8 175 39.4
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 4.4e-17 92.0 153 37.9
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.8e-16 89.4 158 38.6
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 6.9e-15 84.7 166 44.0
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.1e-15 84.3 159 45.9
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.1e-15 84.3 159 45.9
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-14 84.0 159 45.9
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-14 84.0 159 45.9
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-14 84.0 159 45.9
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-14 84.0 159 45.9
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-14 84.0 159 45.9
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-14 82.4 159 45.9
CSS0010831 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.7e-14 81.3 128 60.2
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 2.2e-13 79.7 160 38.1
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.1e-12 77.4 159 40.9
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-12 76.3 160 45.0
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.1e-11 73.2 159 40.9
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.1e-11 73.2 158 32.9
Rhsim07G0156400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.7e-11 72.8 154 37.0
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 3.6e-11 72.4 157 36.9
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.8e-10 70.1 159 43.4
Rhsim12G0091400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.8e-10 70.1 159 38.4
Ciclev10033751m.g Citrus clementina HOM05D001576 ORTHO05D000401 5.2e-10 68.6 138 35.5
TWI74G0871 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 8.8e-10 67.8 165 49.7
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 2.0e-09 66.6 146 49.3
Rhsim12G0116000 Rhododendron simsii HOM05D028291 ORTHO05D020238 2.6e-09 66.2 145 33.1
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 2.2e-08 63.2 160 35.0
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-07 60.1 159 44.7
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.1e-07 59.3 158 31.6
TWI38G1366 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 3.1e-07 59.3 158 38.6
CiPaw.02G030800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.4 159 41.5
Haze_08540 Corylus avellana HOM05D058381 ORTHO05D020238 1.2e-06 57.4 157 37.6
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-06 56.2 159 43.4
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-06 56.2 159 43.4
TWI60G0823 Tripterygium wilfordii HOM05D001576 ORTHO05D010240 2.6e-06 56.2 158 31.6
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.5e-06 55.5 155 43.2
Rhsim06G0075000 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.9e-06 55.1 116 35.3
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.7e-06 54.7 158 30.4


User provided reference genes

Program Settings