Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023777 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 1.3e-43 180.3 172 100.0
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 2.1e-17 93.2 86 60.5
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 3.6e-17 92.4 74 66.2
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 4.4e-15 85.5 81 51.9
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 5.9e-12 75.1 89 49.4
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 5.9e-12 75.1 80 48.8
QL02p025328 Quercus lobata HOM05D003899 ORTHO05D003655 7.7e-12 74.7 79 49.4
Duzib093G0910 Durio zibethinus HOM05D003899 ORTHO05D003655 1.0e-11 74.3 79 50.6
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 1.0e-11 74.3 79 49.4
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 1.7e-11 73.6 83 48.2
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.2e-11 73.2 86 40.7
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 2.2e-11 73.2 62 53.2
TWI60G1060 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 2.2e-11 73.2 85 51.8
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 2.9e-11 72.8 81 45.7
CSS0000461 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 5.0e-11 72.0 69 53.6
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 5.0e-11 72.0 82 47.6
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 5.0e-11 72.0 62 53.2
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 6.5e-11 71.6 83 48.2
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 6.5e-11 71.6 82 50.0
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 1.1e-10 70.9 79 41.8
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 1.1e-10 70.9 80 43.8
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 1.1e-10 70.9 61 50.8
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 1.9e-10 70.1 84 45.2
Manes.18G087500 Manihot esculenta HOM05D003899 ORTHO05D003655 1.9e-10 70.1 80 52.5
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.5e-10 69.7 80 45.0
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 2.5e-10 69.7 80 41.2
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 2.5e-10 69.7 80 41.2
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 4.2e-10 68.9 83 48.2
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 7.2e-10 68.2 83 48.2
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 7.2e-10 68.2 83 48.2
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 2.1e-09 66.6 79 44.3
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 2.1e-09 66.6 83 44.6
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 2.1e-09 66.6 60 60.0
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 3.6e-09 65.9 48 64.6
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 3.6e-09 65.9 48 64.6
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.6e-09 65.9 82 46.3
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 4.7e-09 65.5 85 41.2
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 4.7e-09 65.5 81 42.0
Atru.chr13.1710 Acer truncatum HOM05D003899 ORTHO05D003655 6.1e-09 65.1 78 47.4
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 8.0e-09 64.7 48 62.5
Cpa.g.sc49.66 Carica papaya HOM05D003899 ORTHO05D003655 1.8e-08 63.5 75 52.0
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 1.8e-08 63.5 50 52.0
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 1.8e-08 63.5 78 46.2
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 1.8e-08 63.5 81 44.4
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 1.8e-08 63.5 63 42.9
Medtr1g008620 Medicago truncatula HOM05D003899 ORTHO05D003655 2.3e-08 63.2 85 41.2
Nitab4.5_0015327g0010 Nicotiana tabacum HOM05D003899 ORTHO05D003655 2.3e-08 63.2 81 40.7
Potri.007G108100 Populus trichocarpa HOM05D003899 ORTHO05D003655 2.3e-08 63.2 81 44.4
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 3.0e-08 62.8 82 41.5
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 3.9e-08 62.4 50 50.0
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 5.2e-08 62.0 79 44.3
Nitab4.5_0008388g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.2e-08 62.0 79 46.8
Sabra07G0088500 Salix brachista HOM05D000850 ORTHO05D000266 5.2e-08 62.0 80 43.8
CiPaw.15G021500 Carya illinoinensis HOM05D003899 ORTHO05D003655 6.7e-08 61.6 86 44.2
Glyma.14G121800 Glycine max HOM05D003899 ORTHO05D003655 1.1e-07 60.8 93 39.8
Phvul.001G052300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 1.1e-07 60.8 86 43.0
TPR.G12083 Trifolium pratense HOM05D003899 ORTHO05D003655 1.1e-07 60.8 60 45.0
TPR.G33315 Trifolium pratense HOM05D003899 ORTHO05D003655 1.1e-07 60.8 80 46.2
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 1.5e-07 60.5 91 40.7
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 1.5e-07 60.5 92 40.2
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 2.0e-07 60.1 80 38.8
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 2.6e-07 59.7 64 46.9
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 2.6e-07 59.7 81 45.7
CANSAT11G1227 Cannabis sativa HOM05D003899 ORTHO05D003655 3.3e-07 59.3 77 41.6
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 3.3e-07 59.3 85 41.2
Psat6g033720 Pisum sativum HOM05D003899 ORTHO05D003655 3.3e-07 59.3 60 46.7
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 3.3e-07 59.3 92 37.0
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 3.3e-07 59.3 81 37.0
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 4.4e-07 58.9 83 38.6
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 5.7e-07 58.5 85 36.5
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 5.7e-07 58.5 73 42.5
Nitab4.5_0001140g0230 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.7e-07 58.5 79 44.3
Nitab4.5_0002974g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.7e-07 58.5 76 38.2
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 7.4e-07 58.2 56 58.9
Hma1.2p1_0528F.1_g173010 Hydrangea macrophylla HOM05D003899 ORTHO05D003655 7.4e-07 58.2 68 41.2
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 7.4e-07 58.2 95 33.7
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 1.3e-06 57.4 80 43.8
Lsat_1_v5_gn_5_108760 Lactuca sativa HOM05D003899 ORTHO05D003655 1.3e-06 57.4 54 51.9
Psat6g033800 Pisum sativum HOM05D003899 ORTHO05D003655 1.3e-06 57.4 60 43.3
Phvul.001G073300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 1.7e-06 57.0 58 46.6
Medtr1g008675 Medicago truncatula HOM05D003899 ORTHO05D003655 2.2e-06 56.6 78 39.7
Medtr1g029140 Medicago truncatula HOM05D003899 ORTHO05D003655 2.2e-06 56.6 88 37.5
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 2.8e-06 56.2 73 41.1
Glyma.14G122000 Glycine max HOM05D003899 ORTHO05D003655 2.8e-06 56.2 72 41.7
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 3.7e-06 55.8 82 35.4
TWI79G1413 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 3.7e-06 55.8 80 41.2
ECA246G5022 Erigeron canadensis HOM05D003899 ORTHO05D003655 4.8e-06 55.5 49 55.1
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 6.3e-06 55.1 81 37.0
PGR002G0009 Punica granatum HOM05D003899 ORTHO05D003655 6.3e-06 55.1 36 63.9
PGR044G0858 Punica granatum HOM05D003899 ORTHO05D003655 6.3e-06 55.1 36 63.9
Migut.M00600 Erythranthe guttata HOM05D003899 ORTHO05D003655 8.2e-06 54.7 83 39.8
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 8.2e-06 54.7 63 41.3
Sopen07g030130 Solanum pennellii HOM05D003899 ORTHO05D003655 8.2e-06 54.7 79 44.3


User provided reference genes

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