Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023765 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 7.2e-89 330.5 160 100.0
CSS0048540 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 6.3e-85 317.4 160 95.6
CSS0045734 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.0e-82 310.1 160 94.4
CSS0002224 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.3e-82 308.9 160 94.4
CSS0008763 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.0e-82 307.8 160 93.8
CSS0030884 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.0e-82 307.8 160 93.8
CSS0049005 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.1e-81 306.6 160 93.1
CSS0020110 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.5e-81 306.2 160 93.1
CSS0036407 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.6e-78 295.4 160 90.0
CSS0021615 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.4e-76 288.9 160 86.2
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.0e-38 162.9 109 67.0
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 2.0e-38 162.9 109 67.0
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.6e-38 162.5 109 66.1
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.9e-37 158.3 109 65.1
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.1e-36 157.1 109 65.1
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 4.2e-36 155.2 117 61.5
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.8e-24 115.9 135 42.2
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.8e-23 113.2 150 40.0
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.3e-23 111.7 135 43.0
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 1.5e-22 110.2 130 41.5
CSS0045174 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.9e-22 107.5 109 49.5
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 9.9e-22 107.5 139 38.8
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 1.3e-21 107.1 133 39.8
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 4.9e-21 105.1 133 39.8
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 6.4e-21 104.8 133 39.1
CSS0050454 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.2e-20 102.1 108 47.2
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 2.7e-19 99.4 133 37.6
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 7.4e-17 91.3 139 36.0
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.3e-16 90.5 66 59.1
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-15 87.4 118 40.7
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-14 84.0 129 34.9
CSS0019622 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.0e-14 83.2 60 65.0
Rhsim01G0119600 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.5e-14 82.0 75 52.0
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-14 81.6 136 35.3
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-13 80.9 136 35.3
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 1.0e-13 80.9 76 50.0
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.3e-13 80.5 65 53.8
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.2e-13 79.7 67 52.2
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-13 79.0 136 34.6
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-13 78.6 133 33.8
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 8.4e-13 77.8 130 35.4
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 1.4e-12 77.0 130 35.4
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.4e-12 77.0 65 52.3
Rhsim09G0078700 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.4e-12 77.0 68 50.0
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-12 76.6 129 34.1
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-12 75.9 139 33.8
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.2e-12 75.5 65 52.3
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 4.2e-12 75.5 127 33.9
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 4.2e-12 75.5 127 33.9
CSS0000617 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.5e-12 75.1 82 48.8
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-12 75.1 136 33.8
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-12 75.1 132 34.1
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-12 74.7 70 50.0
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 9.3e-12 74.3 137 32.8
Rhsim01G0121300 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.6e-11 73.6 131 37.4
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 76 47.4
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 76 47.4
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 76 47.4
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 76 47.4
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 137 33.6
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-11 72.0 135 32.6
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-11 71.6 135 32.6
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 6.1e-11 71.6 137 32.8
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 133 33.1
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 136 33.1
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-10 70.9 67 46.3
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-10 70.9 129 34.9
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-10 70.1 137 31.4
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-10 69.3 76 46.1
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 3.0e-10 69.3 71 45.1
Rhsim08G0127400 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.0e-10 69.3 71 49.3
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.9 69 50.7
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-10 68.6 137 31.4
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.2 69 49.3
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.2 69 50.7
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-09 67.4 131 31.3
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-09 67.0 133 31.6
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-09 66.6 83 38.6
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-09 66.6 137 31.4
Aqoxy6G02234 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 4.3e-09 65.5 67 50.7
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-09 65.5 71 46.5
Migut.J01216 Erythranthe guttata HOM05D000176 ORTHO05D000106 5.7e-09 65.1 79 39.2
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 113 33.6
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 9.7e-09 64.3 67 49.3
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 9.7e-09 64.3 71 45.1
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 9.7e-09 64.3 69 53.6
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-08 63.9 74 45.9
Rhsim10G0126300 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.3e-08 63.9 65 46.2
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-08 63.2 68 47.1
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-08 63.2 69 46.4
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-08 61.2 113 34.5
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-08 61.2 132 30.3
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 1.4e-07 60.5 143 25.9
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-07 60.1 74 41.9
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-07 58.9 48 54.2
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 4.1e-07 58.9 133 30.1
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-07 58.5 134 27.6
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 6.9e-07 58.2 61 39.3
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-07 58.2 71 42.3
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 9.0e-07 57.8 61 39.3
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 9.0e-07 57.8 61 39.3
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-06 57.4 61 39.3
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-06 57.4 47 59.6
Lj4P686T45 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-06 57.4 70 42.9
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-06 57.4 70 41.4
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 1.5e-06 57.0 61 37.7
Aqoxy6G02007 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 2.6e-06 56.2 122 28.7
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 2.6e-06 56.2 113 31.9
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-06 56.2 47 53.2
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 4.5e-06 55.5 61 39.3
Lju4093C0T8 Lonicera japonica HOM05D000176 ORTHO05D000106 7.7e-06 54.7 108 30.6
Lj1g0006892 Lotus japonicus HOM05D000176 ORTHO05D000106 7.7e-06 54.7 93 37.6
Aqoxy7G02369 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.0e-05 54.3 91 36.3
Aqoxy7G02373 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.0e-05 54.3 91 36.3
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-05 54.3 109 34.9
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-05 54.3 109 34.9
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-05 54.3 109 34.9
Rhsim06G0111000 Rhododendron simsii HOM05D000107 ORTHO05D011435 1.0e-05 54.3 44 45.5


User provided reference genes

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