Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 5.3e-90 334.3 171 100.0
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 5.0e-88 327.8 172 98.8
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 5.1e-48 194.9 171 59.1
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 2.8e-46 189.1 155 63.2
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 5.2e-45 184.9 130 70.8
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 6.4e-43 177.9 172 54.1
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.1e-42 177.2 170 56.5
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 2.4e-42 176.0 162 55.6
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 5.4e-42 174.9 172 54.7
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 1.0e-40 170.6 171 54.4
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 1.3e-40 170.2 171 54.4
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 2.3e-40 169.5 172 55.2
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 3.0e-40 169.1 164 52.4
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 3.0e-40 169.1 164 54.3
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 6.6e-40 167.9 172 54.1
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 1.1e-39 167.2 171 52.6
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 5.6e-39 164.9 177 54.2
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 5.6e-39 164.9 173 54.3
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 9.6e-39 164.1 174 55.7
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.6e-38 163.3 164 52.4
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.6e-38 162.2 164 52.4
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 4.8e-38 161.8 172 54.1
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 6.2e-38 161.4 173 53.2
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 6.2e-38 161.4 162 54.9
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 8.1e-38 161.0 164 53.0
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.1e-37 160.6 173 54.9
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 4.0e-37 158.7 164 51.8
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 5.3e-37 158.3 171 50.9
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 5.3e-37 158.3 148 55.4
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 9.0e-37 157.5 161 55.3
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 1.2e-36 157.1 171 51.5
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 1.2e-36 157.1 179 50.3
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 2.6e-36 156.0 173 51.4
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 2.6e-36 156.0 172 50.0
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 3.4e-36 155.6 165 52.7
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 4.4e-36 155.2 173 52.6
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.6e-36 154.5 172 51.2
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 1.3e-35 153.7 173 54.3
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.3e-35 153.7 172 51.7
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 2.2e-35 152.9 171 52.6
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 2.9e-35 152.5 171 48.5
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.1e-34 150.6 172 51.7
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 1.1e-34 150.6 173 50.9
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 1.6e-33 146.7 161 51.6
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.5e-33 145.6 180 48.9
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 4.6e-33 145.2 180 49.4
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.3e-32 142.9 177 48.6
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 3.0e-32 142.5 158 48.7
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 2.5e-31 139.4 173 49.1
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 9.6e-31 137.5 171 49.7
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 2.1e-30 136.3 170 50.6
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 2.8e-30 136.0 171 49.1
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 8.1e-30 134.4 160 51.2
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 2.4e-29 132.9 125 53.6
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.0e-28 129.8 139 49.6
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 3.4e-28 129.0 174 43.7
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.4e-28 129.0 150 46.7
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 7.6e-28 127.9 169 46.2
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 7.6e-28 127.9 178 47.8
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.1e-26 124.0 140 47.9
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 7.1e-26 121.3 164 45.1
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 4.6e-25 118.6 142 49.3
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 6.0e-25 118.2 174 43.1
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 1.0e-24 117.5 172 46.5
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 1.8e-24 116.7 193 42.5
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 2.5e-23 112.8 166 41.0
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 3.3e-23 112.5 100 54.0
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.6e-22 110.2 137 46.7
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 2.1e-22 109.8 112 50.0
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 1.1e-21 107.5 147 46.3
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 5.8e-20 101.7 143 45.5
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 7.6e-20 101.3 143 44.8
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.7e-19 100.1 143 45.5
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.7e-19 100.1 79 59.5
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 8.4e-19 97.8 116 46.6
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 2.7e-17 92.8 117 47.9
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.9e-16 89.0 127 41.7
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 3.9e-16 89.0 121 45.5
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 5.1e-16 88.6 101 50.5
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 5.3e-13 78.6 177 36.7


User provided reference genes

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