Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.1e-72 276.6 137 100.0
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.5e-55 219.5 138 81.9
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.3e-40 167.9 90 92.2
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.9e-27 125.2 103 68.9
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.9e-27 125.2 103 68.9
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.3e-25 120.2 103 66.0
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 1.4e-24 116.7 91 71.4
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 1.8e-24 116.3 91 71.4
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 1.8e-24 116.3 103 64.1
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 7.0e-24 114.4 103 63.1
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 7.0e-24 114.4 103 63.1
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 7.0e-24 114.4 91 71.4
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 7.0e-24 114.4 91 71.4
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 7.0e-24 114.4 103 62.1
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 9.1e-24 114.0 103 62.1
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 9.1e-24 114.0 103 63.1
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.6e-23 113.2 103 62.1
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 2.0e-23 112.8 103 62.1
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 2.6e-23 112.5 91 68.1
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 2.6e-23 112.5 91 68.1
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.6e-23 112.5 91 68.1
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.6e-23 112.5 91 68.1
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 2.6e-23 112.5 97 63.9
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 4.5e-23 111.7 90 68.9
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 4.5e-23 111.7 103 61.2
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 4.5e-23 111.7 91 68.1
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 5.9e-23 111.3 103 62.1
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 5.9e-23 111.3 90 68.9
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 5.9e-23 111.3 97 63.9
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.0e-22 110.5 127 53.5
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 1.3e-22 110.2 103 60.2
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 1.3e-22 110.2 103 60.2
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 2.2e-22 109.4 103 60.2
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 2.2e-22 109.4 103 61.2
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 2.2e-22 109.4 104 61.5
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 3.8e-22 108.6 103 59.2
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 1.1e-21 107.1 91 64.8
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 1.1e-21 107.1 91 68.1
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 1.5e-21 106.7 91 67.0
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 1.9e-21 106.3 91 65.9
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 4.2e-21 105.1 91 64.8
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 4.2e-21 105.1 91 64.8
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 4.2e-21 105.1 103 58.3
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 7.2e-21 104.4 91 64.8
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 9.4e-21 104.0 91 64.8
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 9.4e-21 104.0 104 55.8
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.2e-20 103.6 91 65.9
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 1.2e-20 103.6 103 58.3
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 1.2e-20 103.6 103 58.3
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 1.6e-20 103.2 91 63.7
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 1.6e-20 103.2 104 57.7
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.6e-20 103.2 91 63.7
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 2.1e-20 102.8 91 62.6
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.1e-20 102.8 91 64.8
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.1e-20 102.8 91 64.8
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.1e-20 102.8 91 67.0
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.1e-20 102.8 91 67.0
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 2.7e-20 102.4 91 63.7
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 2.7e-20 102.4 91 62.6
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 3.6e-20 102.1 94 62.8
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 3.6e-20 102.1 91 60.4
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 4.7e-20 101.7 91 63.7
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 6.1e-20 101.3 91 61.5
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 6.1e-20 101.3 91 61.5
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 6.1e-20 101.3 91 63.7
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 6.1e-20 101.3 101 58.4
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 6.1e-20 101.3 91 62.6
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 6.1e-20 101.3 91 62.6
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 6.1e-20 101.3 91 62.6
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 8.0e-20 100.9 91 61.5
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 8.0e-20 100.9 91 61.5
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 8.0e-20 100.9 91 61.5
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 8.0e-20 100.9 91 59.3
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 8.0e-20 100.9 103 57.3
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 8.0e-20 100.9 91 61.5
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.0e-19 100.5 91 61.5
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.4e-19 100.1 103 56.3
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.4e-19 100.1 103 56.3
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 1.8e-19 99.8 92 60.9
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.8e-19 99.8 91 61.5
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 6.8e-19 97.8 91 61.5
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 6.8e-19 97.8 91 61.5
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 6.8e-19 97.8 91 61.5
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 1.5e-18 96.7 118 49.2
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.5e-18 96.7 91 60.4
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 2.0e-18 96.3 91 59.3
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 2.6e-18 95.9 91 56.0
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 3.4e-18 95.5 91 60.4
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 1.7e-17 93.2 100 56.0
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 2.8e-17 92.4 91 60.4
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 2.8e-17 92.4 94 57.4
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 3.7e-17 92.0 112 49.1
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.2e-14 82.8 78 61.5
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 5.0e-14 81.6 78 60.3
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 1.9e-13 79.7 103 43.7
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 2.5e-13 79.3 78 59.0
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 4.2e-13 78.6 77 61.0
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 4.2e-13 78.6 103 47.6
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.6e-12 76.6 78 53.8
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.6e-12 76.6 78 53.8
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 2.1e-12 76.3 78 53.8
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 2.7e-12 75.9 48 79.2
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 6.1e-12 74.7 48 81.2
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 1.0e-11 73.9 117 39.3
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 5.2e-11 71.6 47 74.5
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 2.0e-10 69.7 119 38.7
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 5.7e-10 68.2 77 49.4
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 7.5e-10 67.8 48 72.9
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 1.8e-08 63.2 68 55.9
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 5.4e-08 61.6 48 64.6
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 3.5e-07 58.9 32 90.6
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 2.9e-06 55.8 83 41.0


User provided reference genes

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