Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023750 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D021063 1.0e-136 490.3 301 100.0
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 3.2e-122 442.2 283 98.2
CSS0034048 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D021063 2.4e-77 293.1 289 66.4
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 3.3e-74 282.7 284 64.8
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 4.6e-60 235.7 284 57.7
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 5.1e-51 205.7 285 55.8
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 2.2e-46 190.3 286 53.8
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.5e-42 177.6 284 54.2
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 1.4e-40 171.0 288 45.8
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 6.8e-40 168.7 286 46.9
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 1.5e-39 167.5 268 47.8
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 4.4e-39 166.0 287 47.0
Lj1A1163T36 Lonicera japonica HOM05D004072 ORTHO05D005933 2.9e-38 163.3 298 49.7
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 1.2e-36 157.9 288 44.8
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 3.0e-35 153.3 287 43.6
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 5.6e-34 149.1 292 43.8
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 1.1e-32 144.8 293 43.7
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 1.4e-32 144.4 287 43.2
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 9.0e-32 141.7 275 45.8
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 1.5e-31 141.0 286 42.7
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 1.3e-30 137.9 302 43.0
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 2.4e-29 133.7 281 40.2
Cpa.g.sc17.80 Carica papaya HOM05D004072 ORTHO05D021063 3.2e-29 133.3 295 41.0
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 4.2e-29 132.9 301 39.5
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 5.4e-29 132.5 287 45.6
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 7.1e-29 132.1 288 40.3
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 4.6e-28 129.4 291 41.9
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 6.0e-28 129.0 274 44.5
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 7.8e-28 128.6 275 44.7
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.3e-27 127.9 285 40.0
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.7e-27 127.5 276 40.9
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 1.5e-26 124.4 289 44.3
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 7.3e-26 122.1 288 40.6
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 1.6e-25 120.9 280 40.4
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 2.1e-25 120.6 297 39.1
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 3.6e-25 119.8 299 39.5
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 8.1e-25 118.6 291 40.2
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 1.4e-24 117.9 279 42.3
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 1.4e-24 117.9 289 38.8
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 3.1e-24 116.7 287 41.1
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 3.1e-24 116.7 285 41.4
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 6.9e-24 115.5 275 41.1
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 9.9e-23 111.7 275 42.2
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.3e-22 111.3 283 42.4
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 2.9e-22 110.2 263 38.4
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 2.9e-22 110.2 284 40.1
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 4.9e-22 109.4 290 37.9
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 4.9e-22 109.4 275 41.1
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 8.4e-22 108.6 287 41.8
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 3.2e-21 106.7 298 37.2
Atru.chr10.903 Acer truncatum HOM05D004072 ORTHO05D021063 4.2e-21 106.3 187 44.4
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 4.2e-21 106.3 290 37.9
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 6.0e-20 102.4 272 38.6
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 6.0e-20 102.4 289 41.2
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 1.3e-19 101.3 287 32.4
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 3.0e-19 100.1 287 41.5
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 5.1e-19 99.4 272 37.9
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 1.1e-18 98.2 265 34.7
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 1.5e-18 97.8 298 40.6
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 1.9e-18 97.4 277 33.2
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 3.3e-18 96.7 292 37.3
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 3.3e-18 96.7 273 38.1
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 9.6e-18 95.1 261 33.7
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 9.6e-18 95.1 295 36.6
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 9.6e-18 95.1 295 36.6
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 1.6e-17 94.4 307 35.2
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 1.6e-17 94.4 273 38.8
Actinidia36003 Actinidia chinensis HOM05D004072 ORTHO05D021063 2.8e-17 93.6 81 71.6
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 3.1e-16 90.1 294 35.0
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 5.3e-16 89.4 250 38.4
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 1.2e-15 88.2 272 32.7
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 2.0e-15 87.4 270 35.9
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 3.4e-15 86.7 291 39.9
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 4.5e-15 86.3 199 43.2
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 5.8e-15 85.9 254 39.4
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 7.6e-15 85.5 298 38.6
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 9.9e-15 85.1 254 35.8
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.7e-14 84.3 306 33.0
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 1.7e-14 84.3 291 35.1
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 6.4e-14 82.4 281 32.4
Glyma.09G084500 Glycine max HOM05D004072 ORTHO05D005933 6.4e-14 82.4 289 36.0
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 8.4e-14 82.0 253 34.4
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 1.4e-13 81.3 272 31.6
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 2.5e-13 80.5 280 35.4
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 4.2e-13 79.7 274 36.9
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 5.5e-13 79.3 268 31.0
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 1.6e-12 77.8 271 35.4
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 2.7e-12 77.0 196 39.3
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 1.3e-11 74.7 280 36.1
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 2.3e-11 73.9 304 32.9
Glyma.15G192800 Glycine max HOM05D004072 ORTHO05D005933 3.0e-11 73.6 288 33.3
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 5.1e-11 72.8 279 33.7
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 6.7e-11 72.4 296 33.4
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 4.3e-10 69.7 269 31.2
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 2.8e-09 67.0 278 33.8
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 2.4e-08 63.9 271 34.7
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 2.6e-07 60.5 298 32.9
VMungo1309G0832 Vigna mungo HOM05D004072 ORTHO05D005933 3.8e-06 56.6 277 34.7
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 4.9e-06 56.2 286 34.6


User provided reference genes

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