Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023702 Camellia sinensis var. sinensis HOM05D026395 ORTHO05D000004 2.3e-59 231.9 105 100.0
CSS0043808 Camellia sinensis var. sinensis HOM05D026395 ORTHO05D000004 1.7e-46 189.1 108 86.1
CSS0011043 Camellia sinensis var. sinensis HOM05D026395 ORTHO05D005201 1.2e-20 103.2 115 51.3
CSS0045151 Camellia sinensis var. sinensis HOM05D026395 ORTHO05D112969 1.6e-20 102.8 129 48.1
CSS0007662 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-12 75.1 48 70.8
CSS0009894 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-12 74.7 48 68.8
CSS0007786 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.8e-11 70.9 48 64.6
CSS0043776 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 4.4e-10 68.2 48 66.7
CSS0003011 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-09 66.6 48 64.6
CSS0033313 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-09 66.2 48 62.5
CSS0043417 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-08 62.8 48 62.5
CSS0010918 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.4e-08 61.2 60 51.7
FvH4_1g24182 Fragaria vesca HOM05D000003 ORTHO05D000004 5.4e-08 61.2 82 35.4
CSS0005822 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-07 59.7 48 58.3
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 1.3e-06 56.6 103 35.0
ECA232G1209 Erigeron canadensis HOM05D000002 ORTHO05D000004 2.9e-06 55.5 88 33.0
MD02G1293300 Malus domestica HOM05D000003 ORTHO05D000004 3.8e-06 55.1 48 50.0
SHI09341 Sapria himalayana HOM05D000003 ORTHO05D000004 3.8e-06 55.1 125 30.4
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 5.0e-06 54.7 48 47.9
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 5.0e-06 54.7 125 30.4
ECA233G2022 Erigeron canadensis HOM05D000593 ORTHO05D000562 6.6e-06 54.3 48 50.0
ECA246G3491 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.6e-06 54.3 48 47.9
CSS0020881 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.6e-06 53.9 41 61.0
GSVIVG01004860001 Vitis vinifera HOM05D000660 ORTHO05D000766 8.6e-06 53.9 68 39.7


User provided reference genes

Program Settings