Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 6.1e-97 357.5 178 100.0
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 6.1e-97 357.5 178 100.0
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 1.3e-59 233.4 177 67.2
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 4.3e-58 228.4 173 69.4
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 5.4e-53 211.5 171 66.1
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 1.6e-49 199.9 226 53.5
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 4.5e-47 191.8 173 61.3
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.7e-46 189.9 175 60.6
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 3.8e-46 188.7 176 59.7
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 8.4e-46 187.6 177 58.2
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 2.4e-45 186.0 179 59.2
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 3.2e-45 185.7 182 60.4
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 6.0e-44 181.4 175 58.3
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 6.0e-44 181.4 180 56.1
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 1.8e-43 179.9 232 50.0
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 6.7e-43 177.9 176 58.0
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 8.7e-43 177.6 177 58.2
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 8.7e-43 177.6 176 58.0
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 3.3e-42 175.6 176 57.4
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 3.3e-42 175.6 177 55.4
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 5.6e-42 174.9 176 55.1
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 7.4e-42 174.5 178 55.6
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.6e-41 173.3 178 55.6
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 2.1e-41 172.9 179 57.5
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 3.7e-41 172.2 174 56.3
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 3.7e-41 172.2 178 55.6
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 3.7e-41 172.2 179 57.5
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 4.8e-41 171.8 178 54.5
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.1e-40 170.6 179 57.0
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 1.1e-40 170.6 174 57.5
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 1.1e-40 170.6 175 55.4
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.4e-40 169.5 178 53.9
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 2.4e-40 169.5 175 54.3
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 2.4e-40 169.5 182 53.3
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 4.0e-40 168.7 180 58.3
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 5.3e-40 168.3 182 54.4
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 5.3e-40 168.3 178 53.4
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 5.3e-40 168.3 176 55.7
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 6.9e-40 167.9 176 54.0
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 6.9e-40 167.9 169 54.4
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 9.0e-40 167.5 176 57.4
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.2e-39 167.2 176 53.4
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 2.0e-39 166.4 179 56.4
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 7.6e-39 164.5 175 54.9
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 1.3e-38 163.7 177 55.9
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 2.2e-38 162.9 174 56.3
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 2.5e-37 159.5 120 65.0
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 4.2e-37 158.7 167 56.9
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 7.1e-37 157.9 170 54.7
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 7.1e-37 157.9 179 53.6
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 1.2e-36 157.1 175 52.6
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 1.2e-36 157.1 179 53.1
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 1.6e-36 156.8 178 55.1
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 1.6e-36 156.8 189 49.2
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 4.6e-36 155.2 174 48.9
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 1.0e-35 154.1 193 51.8
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 3.0e-35 152.5 180 52.2
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 3.0e-35 152.5 164 54.3
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 3.0e-35 152.5 180 52.2
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 1.9e-34 149.8 179 53.1
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 5.7e-34 148.3 180 47.8
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 9.7e-34 147.5 180 52.8
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 1.6e-33 146.7 175 46.9
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 1.6e-33 146.7 177 53.1
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 2.2e-33 146.4 213 45.5
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 2.8e-33 146.0 174 52.3
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 6.3e-33 144.8 219 42.0
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 1.1e-32 144.1 222 45.5
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 1.8e-32 143.3 174 45.4
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 3.1e-32 142.5 175 50.9
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 3.1e-32 142.5 176 51.7
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 4.1e-32 142.1 175 52.6
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 4.5e-31 138.7 175 52.6
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 7.6e-31 137.9 175 52.0
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 2.2e-30 136.3 152 53.3
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 2.2e-30 136.3 159 49.1
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 8.5e-30 134.4 158 51.3
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 7.2e-29 131.3 159 50.3
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 7.2e-29 131.3 142 51.4
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 9.3e-29 131.0 104 68.3
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 4.6e-28 128.6 140 51.4
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 7.9e-28 127.9 159 48.4
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 2.3e-27 126.3 137 54.0
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 3.3e-26 122.5 102 66.7
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 5.7e-26 121.7 143 47.6
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 7.4e-26 121.3 155 49.0
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 9.7e-26 120.9 153 48.4
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 2.2e-25 119.8 132 53.0
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 3.7e-25 119.0 138 44.9
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 4.8e-25 118.6 148 45.9
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 2.4e-24 116.3 116 52.6
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 1.5e-23 113.6 127 49.6
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 3.4e-23 112.5 158 44.3
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 7.7e-23 111.3 137 50.4
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 1.6e-20 103.6 151 41.1
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 4.7e-20 102.1 173 37.0
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 7.9e-20 101.3 85 64.7
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 7.9e-20 101.3 139 46.8
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 1.4e-19 100.5 139 45.3
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 2.0e-18 96.7 101 59.4
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 1.7e-17 93.6 169 39.6
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 8.2e-17 91.3 132 40.9
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 1.2e-15 87.4 171 36.8
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 3.4e-15 85.9 143 43.4
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 4.5e-15 85.5 162 34.6
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 6.5e-14 81.6 162 32.1
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 8.5e-14 81.3 80 52.5
CARHR082280 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.2e-12 77.4 151 37.7
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 2.7e-12 76.3 94 40.4
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 8.0e-12 74.7 159 32.1
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 8.0e-12 74.7 159 32.1
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 4.4e-10 68.9 98 40.8
Aqoxy4G02934 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 1.7e-09 67.0 122 36.9
CiPaw.10G142500 Carya illinoinensis HOM05D005992 ORTHO05D007476 3.7e-09 65.9 68 52.9
Gorai.009G395900 Gossypium raimondii HOM05D005992 ORTHO05D007476 1.4e-08 63.9 59 52.5
AT3G07580 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 4.1e-08 62.4 135 35.6
Aa31LG5G18140 Aethionema arabicum HOM05D005992 ORTHO05D007476 5.3e-08 62.0 66 43.9
Gohir.D11G007175 Gossypium hirsutum HOM05D005992 ORTHO05D007476 9.1e-08 61.2 59 49.2
BcaC05g29553 Brassica carinata HOM05D005992 ORTHO05D007476 1.2e-07 60.8 109 33.9
Gohir.D11G304103 Gossypium hirsutum HOM05D005992 ORTHO05D007476 1.2e-07 60.8 55 52.7
Gohir.D09G141833 Gossypium hirsutum HOM05D005992 ORTHO05D007476 3.5e-07 59.3 55 50.9
Gohir.D07G124900 Gossypium hirsutum HOM05D005992 ORTHO05D007476 5.9e-07 58.5 59 47.5


User provided reference genes

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