Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 8.0e-160 567.0 278 100.0
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 4.4e-118 428.3 250 83.2
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 1.1e-116 423.7 263 80.2
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 6.2e-112 407.9 251 77.7
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 8.1e-112 407.5 240 80.8
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 8.4e-109 397.5 296 68.9
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 3.2e-108 395.6 250 74.8
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 2.7e-107 392.5 250 74.0
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 3.5e-107 392.1 242 79.3
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 3.0e-106 389.0 250 73.6
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 1.9e-105 386.3 240 77.5
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 1.2e-104 383.6 248 72.6
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 2.1e-104 382.9 250 73.2
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 4.7e-104 381.7 240 75.4
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 1.1e-103 380.6 239 75.3
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 1.1e-103 380.6 239 74.9
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 3.1e-103 379.0 238 73.9
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 9.0e-103 377.5 251 72.9
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 1.2e-102 377.1 251 72.9
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 4.4e-102 375.2 251 72.5
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 5.8e-102 374.8 250 71.6
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 9.9e-102 374.0 252 71.0
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 2.9e-101 372.5 241 72.2
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 3.8e-101 372.1 257 70.4
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 4.9e-101 371.7 244 72.1
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 1.4e-100 370.2 250 72.8
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 1.4e-100 370.2 250 70.4
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 1.9e-100 369.8 237 74.3
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 3.2e-100 369.0 240 71.7
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 3.2e-100 369.0 240 73.8
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 4.2e-100 368.6 242 72.3
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 7.1e-100 367.9 244 72.1
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 7.1e-100 367.9 250 71.2
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 6.0e-99 364.8 248 70.2
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.0e-98 364.0 248 70.2
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.3e-98 363.6 248 69.8
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 1.7e-98 363.2 241 73.9
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 1.7e-98 363.2 241 73.9
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 1.7e-98 363.2 242 70.2
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.7e-98 363.2 248 70.2
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 2.3e-98 362.8 247 70.9
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 5.1e-98 361.7 243 70.4
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 5.1e-98 361.7 248 70.2
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 5.1e-98 361.7 250 70.4
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.5e-97 359.4 244 71.3
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.5e-97 359.4 242 71.1
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 7.3e-97 357.8 244 71.3
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 9.6e-97 357.5 244 71.7
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 1.3e-96 357.1 242 69.8
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.3e-96 357.1 248 69.0
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 1.3e-96 357.1 240 71.2
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 6.9e-95 351.3 241 71.8
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 6.9e-95 351.3 249 63.1
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 9.0e-95 350.9 241 71.0
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 9.0e-95 350.9 240 70.4
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 1.2e-94 350.5 247 68.0
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.2e-94 350.5 250 65.2
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 1.2e-94 350.5 240 69.6
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 2.0e-94 349.7 249 67.9
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 5.8e-94 348.2 250 67.6
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 7.6e-94 347.8 258 67.4
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 1.7e-93 346.7 240 69.2
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 8.4e-93 344.4 237 71.3
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.4e-92 342.8 233 67.8
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 3.2e-92 342.4 240 70.0
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 1.2e-91 340.5 241 68.9
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.6e-91 340.1 246 68.7
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 3.5e-91 339.0 250 65.6
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 1.0e-90 337.4 241 68.0
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 1.8e-90 336.7 250 70.8
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 1.8e-90 336.7 240 67.1
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.3e-90 336.3 209 81.3
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 3.9e-90 335.5 250 62.8
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 6.7e-90 334.7 250 64.4
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 6.7e-90 334.7 238 67.6
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.5e-89 333.6 249 68.3
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 5.6e-89 331.6 244 65.2
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 3.7e-88 328.9 282 59.2
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 1.1e-87 327.4 251 66.1
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.5e-86 323.6 178 91.6
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 6.0e-83 311.6 233 62.2
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 6.7e-82 308.1 183 75.4
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.1e-81 307.4 250 58.8
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.9e-81 306.6 241 61.4
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 9.6e-81 304.3 250 59.2
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 4.8e-80 302.0 250 57.6
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 2.9e-77 292.7 185 72.4
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 1.5e-73 280.4 182 72.5
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 2.5e-73 279.6 182 72.5
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.4e-71 273.9 183 71.0
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 5.9e-70 268.5 231 54.5
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.0e-69 267.7 237 59.9
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 1.9e-68 263.5 182 69.8
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.5e-68 263.1 231 53.7
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 5.5e-68 261.9 182 67.6
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 2.1e-67 260.0 181 68.0
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 3.3e-65 252.7 236 48.7
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 6.3e-64 248.4 180 66.1
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 3.1e-63 246.1 237 47.7
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 2.2e-61 240.0 227 49.8
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 4.4e-57 225.7 248 46.4
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.2e-56 223.4 228 49.6
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 4.1e-55 219.2 181 53.6
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 7.7e-54 214.9 237 44.7
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 1.4e-52 210.7 205 48.3
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 2.2e-48 196.8 147 58.5
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 6.3e-48 195.3 109 78.9
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 4.5e-46 189.1 178 46.1
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.2e-37 160.2 180 45.6
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 4.4e-33 146.0 248 39.1
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 2.4e-31 140.2 218 33.5
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 1.0e-29 134.8 105 65.7
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 1.2e-22 111.3 241 27.0


User provided reference genes

Program Settings