Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.1e-71 272.3 142 100.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 9.4e-40 167.2 143 68.5
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.6e-39 166.4 144 64.6
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 6.1e-39 164.5 139 65.5
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 6.7e-38 161.0 145 69.0
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 8.8e-38 160.6 145 66.2
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 3.3e-37 158.7 104 79.8
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.3e-36 156.8 144 66.7
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 1.3e-36 156.8 145 66.2
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 2.8e-36 155.6 135 67.4
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 8.2e-36 154.1 148 62.2
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 8.2e-36 154.1 128 68.8
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 1.1e-35 153.7 143 61.5
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 3.1e-35 152.1 144 61.1
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.1e-35 152.1 131 68.7
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 4.1e-35 151.8 145 63.4
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 9.1e-35 150.6 148 60.1
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 1.2e-34 150.2 143 61.5
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 1.6e-34 149.8 144 60.4
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 2.0e-34 149.4 145 62.1
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 2.6e-34 149.1 146 61.0
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.5e-34 148.7 131 67.2
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 3.5e-34 148.7 153 61.4
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 4.5e-34 148.3 106 71.7
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 4.5e-34 148.3 108 73.1
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 7.7e-34 147.5 146 61.6
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 1.3e-33 146.7 145 62.1
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 1.3e-33 146.7 146 61.6
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 1.7e-33 146.4 144 61.8
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 2.2e-33 146.0 145 61.4
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.9e-33 145.6 144 63.2
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 2.9e-33 145.6 144 63.2
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 3.8e-33 145.2 146 57.5
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 5.0e-33 144.8 144 61.1
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 5.0e-33 144.8 143 58.7
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 5.0e-33 144.8 148 60.1
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 6.5e-33 144.4 107 72.0
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 6.5e-33 144.4 147 59.2
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 6.5e-33 144.4 103 76.7
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 6.5e-33 144.4 143 60.1
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 1.5e-32 143.3 144 56.2
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 1.5e-32 143.3 107 71.0
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.5e-32 143.3 111 73.0
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.9e-32 142.9 140 59.3
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 2.5e-32 142.5 149 63.8
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.5e-32 142.5 145 60.7
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.5e-32 142.5 146 58.2
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 3.2e-32 142.1 107 71.0
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 3.2e-32 142.1 106 72.6
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 4.2e-32 141.7 143 60.1
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 7.2e-32 141.0 175 52.6
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 9.4e-32 140.6 137 59.1
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 9.4e-32 140.6 146 57.5
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.2e-31 140.2 146 57.5
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 2.1e-31 139.4 142 58.5
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 2.1e-31 139.4 146 58.2
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 2.7e-31 139.0 136 57.4
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 2.7e-31 139.0 143 58.7
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.6e-31 138.7 142 57.0
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 4.7e-31 138.3 136 58.8
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 6.1e-31 137.9 143 53.1
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.0e-30 137.1 149 60.4
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.8e-30 136.3 143 51.0
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 2.3e-30 136.0 146 54.8
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 4.0e-30 135.2 103 71.8
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 4.0e-30 135.2 150 56.7
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 6.7e-30 134.4 106 67.0
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 8.8e-30 134.0 96 76.0
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 8.8e-30 134.0 103 71.8
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 2.6e-29 132.5 146 57.5
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 3.3e-29 132.1 144 54.2
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 7.5e-29 131.0 107 70.1
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 7.5e-29 131.0 151 55.6
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 4.8e-28 128.3 151 57.0
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 8.2e-28 127.5 147 53.7
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 1.1e-27 127.1 148 56.1
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 1.4e-27 126.7 94 70.2
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 5.3e-27 124.8 146 55.5
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.0e-26 122.9 150 52.7
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.5e-26 121.7 135 56.3
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 5.9e-26 121.3 149 54.4
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 5.9e-26 121.3 149 54.4
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 5.9e-26 121.3 117 60.7
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 5.9e-26 121.3 148 54.1
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 7.7e-26 120.9 148 54.1
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 7.7e-26 120.9 149 54.4
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 7.7e-26 120.9 149 54.4
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 2.2e-25 119.4 119 56.3
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 2.9e-25 119.0 143 54.5
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.9e-25 119.0 136 55.1
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 2.9e-25 119.0 87 71.3
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 3.8e-25 118.6 82 74.4
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 5.0e-25 118.2 147 51.7
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 8.5e-25 117.5 152 52.0
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 8.5e-25 117.5 157 49.7
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 5.5e-24 114.8 144 50.0
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 7.2e-24 114.4 106 60.4
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 2.7e-23 112.5 114 60.5
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 8.0e-23 110.9 95 57.9
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 5.2e-22 108.2 84 67.9
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 5.2e-22 108.2 150 50.7
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 2.6e-21 105.9 135 53.3
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 8.3e-20 100.9 118 49.2
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 9.1e-19 97.4 82 64.6
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.7e-17 93.2 76 65.8
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 6.5e-17 91.3 78 59.0
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 2.8e-15 85.9 101 49.5
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.4e-14 83.6 101 42.6
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 4.0e-14 82.0 89 47.2
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 5.2e-14 81.6 101 52.5
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 2.6e-13 79.3 76 50.0
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 3.4e-13 79.0 110 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 1.7e-12 76.6 82 48.8
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 2.8e-12 75.9 55 70.9
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 5.9e-10 68.2 61 59.0
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 1.0e-06 57.4 32 81.2
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.4e-06 57.0 52 53.8


User provided reference genes

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