Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 3.2e-37 157.9 79 100.0
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 2.7e-12 75.1 42 88.1
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 7.9e-12 73.6 58 65.5
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 1.0e-11 73.2 42 78.6
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 1.8e-11 72.4 42 81.0
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 2.3e-11 72.0 42 78.6
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 2.3e-11 72.0 44 77.3
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 3.9e-11 71.2 42 78.6
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 5.1e-11 70.9 35 100.0
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 8.7e-11 70.1 42 78.6
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 1.1e-10 69.7 42 76.2
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.1e-10 69.7 42 76.2
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.9e-10 68.9 56 57.1
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 1.9e-10 68.9 42 78.6
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 3.3e-10 68.2 42 78.6
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 3.3e-10 68.2 42 71.4
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 3.3e-10 68.2 56 58.9
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 5.6e-10 67.4 42 73.8
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 5.6e-10 67.4 42 71.4
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 7.4e-10 67.0 56 55.4
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 7.4e-10 67.0 42 71.4
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 7.4e-10 67.0 42 71.4
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 9.6e-10 66.6 42 73.8
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 2.1e-09 65.5 42 71.4
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 2.8e-09 65.1 56 53.6
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 4.8e-09 64.3 53 62.3
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 4.8e-09 64.3 42 73.8
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 6.2e-09 63.9 42 73.8
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 6.2e-09 63.9 42 78.6
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 8.1e-09 63.5 42 78.6
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 1.1e-08 63.2 42 69.0
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.1e-08 63.2 42 69.0
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 1.1e-08 63.2 38 78.9
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 1.1e-08 63.2 42 73.8
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 1.8e-08 62.4 42 71.4
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 2.4e-08 62.0 42 64.3
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 2.4e-08 62.0 42 69.0
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 4.0e-08 61.2 37 78.4
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 4.0e-08 61.2 37 78.4
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 4.0e-08 61.2 56 50.0
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 6.9e-08 60.5 42 64.3
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 6.9e-08 60.5 42 61.9
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 6.9e-08 60.5 42 69.0
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 1.5e-07 59.3 42 69.0
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 2.0e-07 58.9 42 66.7
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 2.6e-07 58.5 42 66.7
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 2.6e-07 58.5 42 66.7
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 2.6e-07 58.5 42 61.9
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 4.5e-07 57.8 42 64.3
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 5.8e-07 57.4 35 77.1
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 5.8e-07 57.4 36 69.4
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 9.9e-07 56.6 37 70.3
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 2.2e-06 55.5 42 61.9
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 6.4e-06 53.9 42 66.7


User provided reference genes

Program Settings