Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 1.2e-21 105.5 52 100.0
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 5.9e-16 86.7 52 76.9
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 1.3e-15 85.5 52 76.9
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 5.0e-15 83.6 52 75.0
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 1.9e-14 81.6 52 75.0
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 1.9e-14 81.6 53 77.4
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 2.5e-14 81.3 52 73.1
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 3.2e-14 80.9 52 78.8
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 4.2e-14 80.5 52 75.0
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 7.2e-14 79.7 51 78.4
Glyma.07G057502 Glycine max HOM05D008687 ORTHO05D010822 9.4e-14 79.3 52 69.2
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 2.1e-13 78.2 52 76.9
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 3.6e-13 77.4 52 73.1
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 3.6e-13 77.4 52 67.3
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 6.1e-13 76.6 52 71.2
Psat4g160200 Pisum sativum HOM05D008687 ORTHO05D010822 6.1e-13 76.6 52 69.2
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 1.4e-12 75.5 52 73.1
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 3.0e-12 74.3 52 69.2
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 3.0e-12 74.3 52 67.3
Glyma.16G026500 Glycine max HOM05D008687 ORTHO05D010822 5.2e-12 73.6 52 63.5
Lj3g0001832 Lotus japonicus HOM05D008687 ORTHO05D010822 4.4e-11 70.5 52 61.5
Sc01g0002900 Simmondsia chinensis HOM05D008687 ORTHO05D010822 4.4e-11 70.5 52 61.5
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 9.8e-11 69.3 52 63.5
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 1.3e-10 68.9 52 65.4
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 2.2e-10 68.2 52 63.5
Potri.014G095901 Populus trichocarpa HOM05D008687 ORTHO05D010822 7.0e-09 63.2 52 59.6
Thecc.01G345800 Theobroma cacao HOM05D008687 ORTHO05D010822 7.0e-09 63.2 52 59.6
Nn1g02205 Nelumbo nucifera HOM05D008687 ORTHO05D010822 3.5e-08 60.8 33 84.8
HanXRQChr06g0166891 Helianthus annuus HOM05D008687 ORTHO05D010822 7.7e-08 59.7 44 56.8
GSVIVG01027061001 Vitis vinifera HOM05D008687 ORTHO05D010822 7.7e-08 59.7 52 55.8
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.3e-07 58.9 52 57.7
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.3e-07 58.9 52 57.7
Gorai.001G156200 Gossypium raimondii HOM05D008687 ORTHO05D010822 1.3e-07 58.9 47 59.6
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 1.3e-07 58.9 52 57.7
FAN10G1050 Fragaria x ananassa HOM05D036424 ORTHO05D010822 3.8e-07 57.4 33 78.8
FAN10G4301 Fragaria x ananassa HOM05D036424 ORTHO05D010822 3.8e-07 57.4 33 78.8
Cc02_g39090 Coffea canephora HOM05D008687 ORTHO05D010822 5.0e-07 57.0 33 75.8
Gohir.D07G144200 Gossypium hirsutum HOM05D008687 ORTHO05D010822 5.0e-07 57.0 45 60.0
COL.COLO4_06317 Corchorus olitorius HOM05D008687 ORTHO05D010822 8.5e-07 56.2 52 50.0
FAN03G1283 Fragaria x ananassa HOM05D008687 ORTHO05D010822 8.5e-07 56.2 34 73.5
FAN06G2082 Fragaria x ananassa HOM05D036424 ORTHO05D010822 8.5e-07 56.2 34 73.5
Medtr3g113880 Medicago truncatula HOM05D008687 ORTHO05D010822 7.2e-06 53.1 33 69.7
unitig_52.g17066 Utricularia gibba HOM05D008687 ORTHO05D010822 9.5e-06 52.8 40 57.5


User provided reference genes

Program Settings