Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023584 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.2e-118 429.9 224 100.0
CSS0033649 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 9.8e-100 367.1 198 96.0
CSS0046795 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 6.5e-96 354.4 198 93.4
CSS0004605 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 2.5e-95 352.4 198 92.9
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.6e-94 348.6 215 87.0
CSS0039680 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 3.1e-90 335.5 198 89.9
CSS0014156 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 8.3e-75 284.3 189 81.5
CSS0010984 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 3.2e-74 282.3 198 77.3
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-62 243.8 198 69.2
CSS0041790 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.9e-50 203.4 215 53.5
CSS0025555 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 9.0e-45 184.5 212 52.4
CSS0030897 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.0e-24 117.9 166 45.2
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.6e-23 111.3 228 38.6
CSS0007143 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.0e-19 101.3 110 50.9
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 1.1e-15 87.8 173 37.0
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 9.0e-13 78.2 88 48.9
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-12 77.4 150 36.0
CSS0004826 Camellia sinensis var. sinensis HOM05D057373 ORTHO05D012494 1.0e-08 64.7 188 32.4
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 1.0e-08 64.7 192 32.8
Hma1.2p1_0002F.1_g002660 Hydrangea macrophylla HOM05D000045 ORTHO05D012494 1.4e-08 64.3 105 41.0
vmacro19402 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 2.3e-08 63.5 144 34.0
vmacro03885 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 3.0e-08 63.2 108 38.9
CSS0044320 Camellia sinensis var. sinensis HOM05D057373 ORTHO05D012494 5.1e-08 62.4 176 34.7
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 8.8e-08 61.6 98 39.8
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 2.6e-07 60.1 102 39.2
Hma1.2p1_3064F.1_g332250 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 3.3e-07 59.7 150 35.3
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.7e-06 56.2 99 36.4
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.8e-06 55.8 101 39.6
vmacro17071 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 4.8e-06 55.8 101 40.6


User provided reference genes

Program Settings