Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023580 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 1.8e-43 179.1 106 100.0
CSS0005264 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 1.4e-24 116.3 128 57.0
Actinidia28995 Actinidia chinensis HOM05D000142 ORTHO05D000124 8.1e-20 100.5 155 49.0
Rhsim09G0060000 Rhododendron simsii HOM05D000142 ORTHO05D000124 9.2e-16 87.0 132 44.7
CSS0047850 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 2.3e-14 82.4 156 46.8
vmacro00439 Vaccinium macrocarpon HOM05D000142 ORTHO05D000124 2.3e-14 82.4 130 45.4
Rhsim02G0061700 Rhododendron simsii HOM05D000142 ORTHO05D000124 8.6e-14 80.5 155 45.8
Nn1g08185 Nelumbo nucifera HOM05D000142 ORTHO05D000124 3.3e-13 78.6 129 41.1
GSVIVG01021024001 Vitis vinifera HOM05D000142 ORTHO05D000124 4.3e-13 78.2 131 42.0
Dinv27201 Davidia involucrata HOM05D000142 ORTHO05D000124 1.2e-12 76.6 130 40.0
Aqoxy2G03938 Aquilegia oxysepala HOM05D000142 ORTHO05D000124 2.8e-12 75.5 131 40.5
TAR633G0711 Trochodendron aralioides HOM05D000142 ORTHO05D000124 1.1e-11 73.6 130 41.5
Sc13g0000400 Simmondsia chinensis HOM05D000142 ORTHO05D000124 1.4e-11 73.2 135 39.3
Cfa014996 Carpinus fangiana HOM05D000142 ORTHO05D000124 2.3e-11 72.4 131 40.5
Haze_11650 Corylus avellana HOM05D000142 ORTHO05D000124 2.3e-11 72.4 131 39.7
Duzib151G0909 Durio zibethinus HOM05D000142 ORTHO05D000124 6.8e-11 70.9 134 39.6
Thecc.04G195500 Theobroma cacao HOM05D000142 ORTHO05D000124 8.9e-11 70.5 134 38.8
EL10Ac3g07457 Beta vulgaris HOM05D000142 ORTHO05D000124 1.5e-10 69.7 132 40.9
Manes.15G056500 Manihot esculenta HOM05D000142 ORTHO05D000124 2.6e-10 68.9 134 38.8
ATR0561G266 Amborella trichopoda HOM05D000142 ORTHO05D000124 3.4e-10 68.6 131 37.4
Lsat_1_v5_gn_6_59181 Lactuca sativa HOM05D000142 ORTHO05D000124 4.4e-10 68.2 88 47.7
CiPaw.01G117200 Carya illinoinensis HOM05D000142 ORTHO05D000124 5.8e-10 67.8 131 38.2
Duzib212G0978 Durio zibethinus HOM05D000142 ORTHO05D000124 5.8e-10 67.8 134 38.8
MBI07_g45038_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 7.6e-10 67.4 131 37.4
Potri.017G059000 Populus trichocarpa HOM05D000142 ORTHO05D000124 7.6e-10 67.4 131 39.7
Sabra17G0052600 Salix brachista HOM05D000142 ORTHO05D000124 7.6e-10 67.4 131 39.7
QL06p026090 Quercus lobata HOM05D000142 ORTHO05D000124 1.7e-09 66.2 130 37.7
HanXRQChr02g0058751 Helianthus annuus HOM05D000142 ORTHO05D000124 2.2e-09 65.9 88 47.7
Gohir.D10G138200 Gossypium hirsutum HOM05D000142 ORTHO05D000124 2.9e-09 65.5 134 36.6
Gorai.011G153300 Gossypium raimondii HOM05D000142 ORTHO05D000124 2.9e-09 65.5 134 36.6
MBI15_g33560_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 2.9e-09 65.5 120 38.3
TAR362G1249 Trochodendron aralioides HOM05D000142 ORTHO05D000124 2.9e-09 65.5 127 40.2
Gohir.A02G019400 Gossypium hirsutum HOM05D000142 ORTHO05D000124 3.8e-09 65.1 137 39.4
HanXRQChr07g0185611 Helianthus annuus HOM05D000142 ORTHO05D000124 3.8e-09 65.1 131 40.5
Ah.04g149360 Amaranthus hybridus HOM05D000142 ORTHO05D000124 4.9e-09 64.7 112 39.3
Gohir.D02G022700 Gossypium hirsutum HOM05D000142 ORTHO05D000124 4.9e-09 64.7 137 39.4
Gorai.005G028100 Gossypium raimondii HOM05D000142 ORTHO05D000124 4.9e-09 64.7 137 39.4
Oeu043440.1 Olea europaea HOM05D000142 ORTHO05D000124 8.4e-09 63.9 133 38.3
Phvul.001G267100 Phaseolus vulgaris HOM05D000142 ORTHO05D000124 1.4e-08 63.2 132 36.4
Oeu002924.1 Olea europaea HOM05D000142 ORTHO05D000124 1.9e-08 62.8 130 36.9
Rhsim10G0057600 Rhododendron simsii HOM05D000142 ORTHO05D339295 1.9e-08 62.8 120 42.5
SalBow3G1705 Salvia bowleyana HOM05D000142 ORTHO05D000124 2.4e-08 62.4 131 36.6
ECA238G3466 Erigeron canadensis HOM05D000142 ORTHO05D000124 4.1e-08 61.6 88 44.3
Migut.G00758 Erythranthe guttata HOM05D000142 ORTHO05D000124 4.1e-08 61.6 131 37.4
Glyma.18G002000 Glycine max HOM05D000142 ORTHO05D000124 4.1e-08 61.6 132 36.4
Lj6C383T0 Lonicera japonica HOM05D000142 ORTHO05D000124 4.1e-08 61.6 122 41.0
AT4G13850 Arabidopsis thaliana HOM05D000142 ORTHO05D000124 7.1e-08 60.8 131 37.4
Sabra17G0052400 Salix brachista HOM05D000142 ORTHO05D000124 7.1e-08 60.8 74 48.6
Cpa.g.sc157.51 Carica papaya HOM05D000142 ORTHO05D000124 9.2e-08 60.5 121 37.2
MSTRG.9799 Avicennia marina HOM05D000142 ORTHO05D000124 1.2e-07 60.1 131 36.6
Sp3g21550 Schrenkiella parvula HOM05D000142 ORTHO05D000124 1.2e-07 60.1 131 34.4
Lj6g0009677 Lotus japonicus HOM05D000142 ORTHO05D000124 1.6e-07 59.7 134 35.8
PGSC0003DMG400020576 Solanum tuberosum HOM05D000142 ORTHO05D000124 1.6e-07 59.7 155 40.6
Carub.0007s2859 Capsella rubella HOM05D000142 ORTHO05D000124 2.1e-07 59.3 130 36.9
MD05G1230700 Malus domestica HOM05D000142 ORTHO05D000124 2.1e-07 59.3 131 35.9
vmacro15564 Vaccinium macrocarpon HOM05D000142 ORTHO05D000124 2.7e-07 58.9 68 52.9
PGSC0003DMG400015754 Solanum tuberosum HOM05D000142 ORTHO05D000124 4.6e-07 58.2 155 37.4
MSTRG.4244 Avicennia marina HOM05D000142 ORTHO05D000124 6.0e-07 57.8 131 36.6
CARHR219760 Cardamine hirsuta HOM05D000142 ORTHO05D000124 6.0e-07 57.8 132 36.4
AL3G38820 Arabidopsis lyrata HOM05D000142 ORTHO05D000124 7.8e-07 57.4 130 33.1
Cc03_g08450 Coffea canephora HOM05D000142 ORTHO05D000124 7.8e-07 57.4 129 36.4
Migut.N00419 Erythranthe guttata HOM05D000142 ORTHO05D000124 7.8e-07 57.4 127 36.2
FAN22G0533 Fragaria x ananassa HOM05D000142 ORTHO05D000124 7.8e-07 57.4 131 39.7
Thhalv10002711m.g Eutrema salsugineum HOM05D000142 ORTHO05D000124 1.0e-06 57.0 128 33.6
Manes.03G144500 Manihot esculenta HOM05D000142 ORTHO05D000124 1.0e-06 57.0 125 35.2
TWI15G0887 Tripterygium wilfordii HOM05D000142 ORTHO05D000124 1.0e-06 57.0 131 34.4
BcaC07g37322 Brassica carinata HOM05D000142 ORTHO05D000124 1.3e-06 56.6 132 37.1
A08p06540 Brassica napus HOM05D000142 ORTHO05D000124 1.3e-06 56.6 132 37.1
C08p07600 Brassica napus HOM05D000142 ORTHO05D000124 1.3e-06 56.6 132 37.1
BolC8t47607H Brassica oleracea HOM05D000142 ORTHO05D000124 1.3e-06 56.6 132 37.1
CDE05G0910 Ceratophyllum demersum HOM05D000142 ORTHO05D000124 1.3e-06 56.6 132 34.8
AL7G42640 Arabidopsis lyrata HOM05D000142 ORTHO05D000124 1.7e-06 56.2 131 35.1
A08p06580 Brassica napus HOM05D000142 ORTHO05D000124 1.7e-06 56.2 132 37.1
Psat5g100360 Pisum sativum HOM05D000142 ORTHO05D000124 1.7e-06 56.2 132 35.6
Hund19007 Selenicereus undatus HOM05D000142 ORTHO05D000124 1.7e-06 56.2 129 36.4
Prupe.1G164600 Prunus persica HOM05D000142 ORTHO05D000124 2.3e-06 55.8 128 37.5
Sopen09g035220 Solanum pennellii HOM05D000142 ORTHO05D000124 2.3e-06 55.8 125 38.4
BcaB04g17641 Brassica carinata HOM05D000142 ORTHO05D000124 3.0e-06 55.5 132 37.1
BraA08t32667Z Brassica rapa HOM05D000142 ORTHO05D000124 3.0e-06 55.5 132 36.4
CANSAT78G1310 Cannabis sativa HOM05D000142 ORTHO05D000124 3.0e-06 55.5 71 49.3
THA.LOC104822223 Tarenaya hassleriana HOM05D000142 ORTHO05D000124 3.0e-06 55.5 126 36.5
arahy.Tifrunner.gnm1.ann1.JXP64F Arachis hypogaea HOM05D000142 ORTHO05D000124 3.9e-06 55.1 139 34.5
BraA08t32674Z Brassica rapa HOM05D000142 ORTHO05D000124 3.9e-06 55.1 128 36.7
Carub.0003s2414 Capsella rubella HOM05D000142 ORTHO05D000124 3.9e-06 55.1 128 33.6
Solyc09g092320.3 Solanum lycopersicum HOM05D000142 ORTHO05D000124 3.9e-06 55.1 134 38.1
vmacro17040 Vaccinium macrocarpon HOM05D000142 ORTHO05D000124 3.9e-06 55.1 68 50.0
Ah.13g077970 Amaranthus hybridus HOM05D000142 ORTHO05D000124 5.1e-06 54.7 130 33.8
FAN12G3631 Fragaria x ananassa HOM05D000142 ORTHO05D000124 5.1e-06 54.7 131 38.9
Lalb_Chr11g0075921 Lupinus albus HOM05D000142 ORTHO05D000124 5.1e-06 54.7 126 34.1
Glyma.11G255000 Glycine max HOM05D000142 ORTHO05D000124 6.6e-06 54.3 140 32.9
Hund24411 Selenicereus undatus HOM05D000142 ORTHO05D000124 6.6e-06 54.3 128 35.2
Lalb_Chr23g0278341 Lupinus albus HOM05D000142 ORTHO05D000124 8.6e-06 53.9 124 33.9
Sp7g11680 Schrenkiella parvula HOM05D000142 ORTHO05D000124 8.6e-06 53.9 131 34.4
SGA_v2.0_scaffold270G46310 Striga asiatica HOM05D000142 ORTHO05D000124 8.6e-06 53.9 88 42.0


User provided reference genes

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