Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023575 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 2.9e-108 395.2 197 100.0
CSS0019604 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 3.7e-79 298.5 190 82.6
CSS0009698 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 9.9e-64 247.3 190 71.6
CSS0011897 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 2.9e-63 245.7 190 71.1
CSS0007995 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 7.1e-62 241.1 189 71.4
Actinidia32353 Actinidia chinensis HOM05D001299 ORTHO05D009516 1.2e-56 223.8 179 66.5
TAR626G1915 Trochodendron aralioides HOM05D001299 ORTHO05D009516 7.6e-56 221.1 171 67.8
CSS0034631 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 9.9e-56 220.7 212 59.0
GSVIVG01037941001 Vitis vinifera HOM05D001299 ORTHO05D009516 2.1e-53 213.0 172 62.2
FvH4_3g11560 Fragaria vesca HOM05D001299 ORTHO05D009516 4.6e-53 211.8 179 61.5
FAN16G0158 Fragaria x ananassa HOM05D001299 ORTHO05D009516 4.6e-53 211.8 179 61.5
FAN21G1530 Fragaria x ananassa HOM05D001299 ORTHO05D009516 3.0e-52 209.1 179 61.5
FAN25G0007 Fragaria x ananassa HOM05D001299 ORTHO05D009516 3.0e-52 209.1 179 60.9
Haze_05959 Corylus avellana HOM05D001299 ORTHO05D009516 8.7e-52 207.6 181 58.6
COL.COLO4_26895 Corchorus olitorius HOM05D001299 ORTHO05D009516 1.5e-51 206.8 179 59.8
Lj6g0006807 Lotus japonicus HOM05D001299 ORTHO05D009516 1.9e-51 206.5 172 59.3
RcHm_v2.0_Chr5g0018511 Rosa chinensis HOM05D001299 ORTHO05D009516 1.9e-51 206.5 179 60.3
Manes.03G067266 Manihot esculenta HOM05D001299 ORTHO05D009516 3.3e-51 205.7 172 59.9
Lj1A1156T42 Lonicera japonica HOM05D001299 ORTHO05D009516 7.4e-51 204.5 185 59.5
Cfa000759 Carpinus fangiana HOM05D001299 ORTHO05D009516 1.6e-50 203.4 179 59.2
Lalb_Chr15g0089001 Lupinus albus HOM05D001299 ORTHO05D009516 1.6e-50 203.4 172 58.1
Ciclev10015984m.g Citrus clementina HOM05D001299 ORTHO05D009516 2.8e-50 202.6 171 60.2
Thecc.06G007400 Theobroma cacao HOM05D001299 ORTHO05D009516 2.8e-50 202.6 179 59.2
Ca_00935_v3 Cicer arietinum L. HOM05D001299 ORTHO05D009516 3.7e-50 202.2 172 59.3
Phvul.006G122300 Phaseolus vulgaris HOM05D001299 ORTHO05D009516 4.8e-50 201.8 172 58.1
Potri.011G155500 Populus trichocarpa HOM05D001299 ORTHO05D009516 6.2e-50 201.4 179 59.2
MD10G1240700 Malus domestica HOM05D001299 ORTHO05D009516 1.1e-49 200.7 179 57.5
Sabra11G0144300 Salix brachista HOM05D001299 ORTHO05D009516 1.4e-49 200.3 172 59.9
Glyma.15G136200 Glycine max HOM05D001299 ORTHO05D009516 4.0e-49 198.7 172 56.4
Cc09_g07140 Coffea canephora HOM05D001299 ORTHO05D009516 6.9e-49 198.0 170 57.6
Duzib235G0189 Durio zibethinus HOM05D001299 ORTHO05D009516 9.0e-49 197.6 167 59.9
VMungo0540G0517 Vigna mungo HOM05D001299 ORTHO05D009516 9.0e-49 197.6 172 57.0
Gohir.D06G121900 Gossypium hirsutum HOM05D001299 ORTHO05D009516 2.0e-48 196.4 171 59.1
Gorai.010G142100 Gossypium raimondii HOM05D001299 ORTHO05D009516 2.0e-48 196.4 171 59.1
Nn7g37865 Nelumbo nucifera HOM05D001299 ORTHO05D009516 2.0e-48 196.4 171 59.6
Psat1g163720 Pisum sativum HOM05D001299 ORTHO05D009516 2.0e-48 196.4 179 56.4
Prupe.4G102900 Prunus persica HOM05D001299 ORTHO05D009516 2.6e-48 196.1 172 58.7
Medtr2g032540 Medicago truncatula HOM05D001299 ORTHO05D009516 7.6e-48 194.5 171 57.3
Sed0008848 Sechium edule HOM05D001299 ORTHO05D009516 2.9e-47 192.6 172 57.0
TPR.G15970 Trifolium pratense HOM05D001299 ORTHO05D009516 2.9e-47 192.6 172 57.6
ClCG01G008880 Citrullus lanatus HOM05D001299 ORTHO05D009516 3.8e-47 192.2 181 54.1
arahy.Tifrunner.gnm1.ann1.85QD0P Arachis hypogaea HOM05D001299 ORTHO05D009516 4.9e-47 191.8 184 52.7
Eucgr.D01028 Eucalyptus grandis HOM05D001299 ORTHO05D009516 6.5e-47 191.4 179 54.7
Lsat_1_v5_gn_1_130040 Lactuca sativa HOM05D001299 ORTHO05D009516 1.1e-46 190.7 173 56.1
Atru.chr10.662 Acer truncatum HOM05D001299 ORTHO05D009516 1.4e-46 190.3 180 56.1
CANSAT35G1957 Cannabis sativa HOM05D001299 ORTHO05D009516 1.4e-46 190.3 177 57.6
MSTRG.16317 Avicennia marina HOM05D001299 ORTHO05D009516 4.2e-46 188.7 171 55.0
CiPaw.10G111000 Carya illinoinensis HOM05D001299 ORTHO05D009516 1.6e-45 186.8 182 54.4
MBI18_g26477_MAGBIO Magnolia biondii HOM05D001299 ORTHO05D009516 1.6e-45 186.8 171 56.1
SalBow8G0840 Salvia bowleyana HOM05D001299 ORTHO05D009516 6.0e-45 184.9 171 53.2
SalBow8G5388 Salvia bowleyana HOM05D001299 ORTHO05D009516 6.0e-45 184.9 171 53.2
Solyc02g069620.4 Solanum lycopersicum HOM05D001299 ORTHO05D009516 6.0e-45 184.9 170 52.4
arahy.Tifrunner.gnm1.ann1.ZN1LAP Arachis hypogaea HOM05D001299 ORTHO05D009516 3.0e-44 182.6 168 53.6
CAN.G675.34 Capsicum annuum HOM05D001299 ORTHO05D009516 3.9e-44 182.2 166 53.0
Sopen02g018750 Solanum pennellii HOM05D001299 ORTHO05D009516 5.1e-44 181.8 170 51.2
PGSC0003DMG400021135 Solanum tuberosum HOM05D001299 ORTHO05D009516 2.5e-43 179.5 219 43.8
MELO3C021811.2 Cucumis melo HOM05D001299 ORTHO05D009516 4.3e-43 178.7 204 48.5
TWI38G0147 Tripterygium wilfordii HOM05D001299 ORTHO05D009516 4.3e-43 178.7 171 53.2
Migut.M01940 Erythranthe guttata HOM05D001299 ORTHO05D009516 9.6e-43 177.6 172 52.3
Nitab4.5_0007613g0040 Nicotiana tabacum HOM05D001299 ORTHO05D009516 2.1e-42 176.4 199 47.2
Nitab4.5_0010415g0020 Nicotiana tabacum HOM05D001299 ORTHO05D009516 4.8e-42 175.3 199 47.2
HanXRQChr11g0341271 Helianthus annuus HOM05D001299 ORTHO05D009516 8.2e-42 174.5 167 53.3
Cpa.g.sc285.1 Carica papaya HOM05D001299 ORTHO05D009516 1.1e-41 174.1 161 55.9
ATR1098G024 Amborella trichopoda HOM05D001299 ORTHO05D009516 3.1e-41 172.6 172 51.7
THA.LOC104806244 Tarenaya hassleriana HOM05D001299 ORTHO05D009516 1.2e-40 170.6 170 49.4
AL8G15300 Arabidopsis lyrata HOM05D001299 ORTHO05D009516 3.8e-39 165.6 182 46.2
BcaC06g31610 Brassica carinata HOM05D001299 ORTHO05D009516 5.0e-39 165.2 171 47.4
A06p47140 Brassica napus HOM05D001299 ORTHO05D009516 5.0e-39 165.2 171 48.0
Sp2g09310 Schrenkiella parvula HOM05D001299 ORTHO05D009516 1.1e-38 164.1 182 47.3
CsaV3_1G037750 Cucumis sativus L. HOM05D001299 ORTHO05D009516 3.2e-38 162.5 150 55.3
Thhalv10000979m.g Eutrema salsugineum HOM05D001299 ORTHO05D009516 3.2e-38 162.5 182 47.3
AT5G44520 Arabidopsis thaliana HOM05D001299 ORTHO05D009516 7.1e-38 161.4 182 46.2
BcaC06g34545 Brassica carinata HOM05D001299 ORTHO05D009516 7.1e-38 161.4 172 46.5
MBI18_g14310_MAGBIO Magnolia biondii HOM05D001299 ORTHO05D009516 1.2e-37 160.6 142 57.7
Aa31LG9G8690 Aethionema arabicum HOM05D001299 ORTHO05D009516 2.1e-37 159.8 182 48.9
SGA_v2.0_scaffold298G47639 Striga asiatica HOM05D001299 ORTHO05D009516 4.6e-37 158.7 217 43.3
Carub.0008s0398 Capsella rubella HOM05D001299 ORTHO05D009516 7.9e-37 157.9 182 46.7
Os03g0781400 Oryza sativa ssp. japonica HOM05D001299 ORTHO05D009516 1.8e-36 156.8 168 48.8
BraA06t27586Z Brassica rapa HOM05D001299 ORTHO05D009516 2.3e-36 156.4 179 45.8
BolC7t43265H Brassica oleracea HOM05D001299 ORTHO05D009516 3.9e-36 155.6 179 45.3
C07p27350 Brassica napus HOM05D001299 ORTHO05D009516 8.7e-36 154.5 179 44.7
Peaxi162Scf00195g00521 Petunia axillaris HOM05D001299 ORTHO05D009516 6.3e-34 148.3 213 41.3
Pp3c16_13350 Physcomitrium patens HOM05D001299 ORTHO05D009516 2.4e-33 146.4 171 40.9
CSS0007807 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 2.1e-29 133.3 174 47.7
CSS0046492 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 2.1e-29 133.3 174 47.7
Gohir.A06G118100 Gossypium hirsutum HOM05D001299 ORTHO05D009516 1.4e-28 130.6 108 63.0
QL05p065109 Quercus lobata HOM05D001299 ORTHO05D009516 2.0e-27 126.7 93 66.7
CDE03G0248 Ceratophyllum demersum HOM05D001299 ORTHO05D009516 7.7e-24 114.8 109 53.2
Oeu063345.2 Olea europaea HOM05D001299 ORTHO05D009516 1.9e-14 83.6 68 61.8
Glyma.09G030500 Glycine max HOM05D001299 ORTHO05D009516 1.8e-12 77.0 56 57.1
CARHR178590 Cardamine hirsuta HOM05D001299 ORTHO05D009516 9.1e-09 64.7 67 49.3
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 1.7e-07 60.5 46 60.9
Pp3c5_830 Physcomitrium patens HOM05D001299 ORTHO05D009516 3.8e-07 59.3 56 57.1


User provided reference genes

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