Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023559 Camellia sinensis var. sinensis HOM05D009292 ORTHO05D011231 4.9e-20 100.5 65 100.0
Hma1.2p1_1676F.1_g297030 Hydrangea macrophylla HOM05D009292 ORTHO05D011231 3.2e-11 71.2 65 67.7
CSS0021837 Camellia sinensis var. sinensis HOM05D009292 ORTHO05D011231 1.2e-10 69.3 66 68.2
Ciclev10033278m.g Citrus clementina HOM05D009292 ORTHO05D011231 2.7e-10 68.2 63 61.9
Glyma.10G205800 Glycine max HOM05D009292 ORTHO05D011231 3.5e-10 67.8 68 60.3
RcHm_v2.0_Chr4g0436321 Rosa chinensis HOM05D009292 ORTHO05D011231 3.5e-10 67.8 66 60.6
FvH4_4g28390 Fragaria vesca HOM05D009292 ORTHO05D011231 6.1e-10 67.0 65 60.0
FAN12G2553 Fragaria x ananassa HOM05D009292 ORTHO05D011231 6.1e-10 67.0 65 60.0
Hma1.2p1_0605F.1_g187940 Hydrangea macrophylla HOM05D009292 ORTHO05D011231 6.1e-10 67.0 65 63.1
FAN22G1533 Fragaria x ananassa HOM05D009292 ORTHO05D011231 7.9e-10 66.6 65 58.5
Thecc.02G364000 Theobroma cacao HOM05D009292 ORTHO05D011231 7.9e-10 66.6 65 63.1
Haze_11797 Corylus avellana HOM05D009292 ORTHO05D011231 1.8e-09 65.5 65 58.5
FAN07G1204 Fragaria x ananassa HOM05D009292 ORTHO05D011231 5.1e-09 63.9 65 58.5
Prupe.1G302100 Prunus persica HOM05D009292 ORTHO05D011231 5.1e-09 63.9 66 65.2
Glyma.20G184700 Glycine max HOM05D009292 ORTHO05D011231 2.5e-08 61.6 71 56.3
TAR371G0982 Trochodendron aralioides HOM05D009292 ORTHO05D011231 2.5e-08 61.6 65 58.5
FAN17G0465 Fragaria x ananassa HOM05D009292 ORTHO05D011231 4.3e-08 60.8 65 69.2
Manes.14G095600 Manihot esculenta HOM05D009292 ORTHO05D011231 1.3e-07 59.3 60 56.7
TPR.G9793 Trifolium pratense HOM05D023570 ORTHO05D011231 1.3e-07 59.3 63 65.1
CiPaw.06G099000 Carya illinoinensis HOM05D009292 ORTHO05D011231 8.2e-07 56.6 65 55.4
Medtr1g093960 Medicago truncatula HOM05D023570 ORTHO05D011231 1.4e-06 55.8 65 67.7
Medtr1g093985 Medicago truncatula HOM05D023570 ORTHO05D011231 1.4e-06 55.8 65 67.7
CiPaw.05G116600 Carya illinoinensis HOM05D009292 ORTHO05D127565 3.1e-06 54.7 67 74.6
vmacro10507 Vaccinium macrocarpon HOM05D009292 ORTHO05D011231 6.9e-06 53.5 55 72.7


User provided reference genes

Program Settings