Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 3.7e-83 311.6 170 100.0
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 3.4e-44 182.2 158 68.4
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 4.9e-43 178.3 173 65.3
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 9.2e-42 174.1 116 77.6
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 9.2e-42 174.1 170 63.5
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 7.8e-41 171.0 170 64.1
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 7.8e-41 171.0 137 71.5
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 1.0e-40 170.6 170 64.1
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.0e-40 170.6 137 68.6
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 1.3e-40 170.2 137 69.3
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 3.9e-40 168.7 137 67.9
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 3.9e-40 168.7 137 67.9
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 3.9e-40 168.7 169 59.8
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 3.9e-40 168.7 156 66.0
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 6.6e-40 167.9 124 75.0
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 6.6e-40 167.9 170 62.4
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 1.1e-39 167.2 170 62.9
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 1.5e-39 166.8 173 61.8
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 2.5e-39 166.0 135 68.1
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 5.6e-39 164.9 173 61.8
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 7.3e-39 164.5 111 72.1
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.2e-38 163.7 111 71.2
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 4.7e-38 161.8 138 66.7
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 8.1e-38 161.0 137 69.3
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 8.1e-38 161.0 169 59.8
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 5.2e-37 158.3 152 59.2
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 6.8e-37 157.9 171 56.7
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 1.5e-36 156.8 171 61.4
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 1.5e-36 156.8 171 61.4
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 1.5e-36 156.8 171 56.7
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 1.5e-36 156.8 113 75.2
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 3.4e-36 155.6 181 57.5
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 1.3e-35 153.7 170 57.1
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 2.9e-35 152.5 109 76.1
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 4.9e-35 151.8 147 59.9
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 6.4e-35 151.4 173 58.4
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 8.3e-35 151.0 170 57.6
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 1.4e-34 150.2 171 58.5
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 3.2e-34 149.1 105 73.3
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 4.1e-34 148.7 170 56.5
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 5.4e-34 148.3 171 58.5
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 7.1e-34 147.9 171 59.1
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 1.2e-33 147.1 111 64.9
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 1.6e-33 146.7 144 61.8
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 2.7e-33 146.0 170 58.8
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 2.7e-33 146.0 170 55.9
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 6.0e-33 144.8 145 59.3
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 6.0e-33 144.8 145 59.3
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 1.0e-32 144.1 178 59.6
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 1.3e-32 143.7 130 61.5
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 3.0e-32 142.5 173 57.8
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 1.5e-31 140.2 112 66.1
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 1.9e-31 139.8 97 75.3
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 2.5e-31 139.4 90 77.8
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 5.6e-31 138.3 142 61.3
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 2.8e-30 136.0 176 55.1
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 3.6e-30 135.6 99 73.7
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 3.6e-30 135.6 114 65.8
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 4.7e-30 135.2 121 59.5
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 1.4e-29 133.7 113 68.1
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 1.8e-29 133.3 84 73.8
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 3.1e-29 132.5 103 68.9
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 4.0e-29 132.1 108 64.8
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 5.2e-29 131.7 107 65.4
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 6.8e-29 131.3 178 52.2
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 1.2e-28 130.6 149 53.7
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 1.5e-28 130.2 103 69.9
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 1.5e-28 130.2 125 63.2
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 2.0e-28 129.8 112 63.4
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 5.8e-28 128.3 104 67.3
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 7.6e-28 127.9 107 64.5
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 7.6e-28 127.9 107 64.5
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 7.6e-28 127.9 98 69.4
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 9.9e-28 127.5 183 43.7
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 2.2e-27 126.3 107 63.6
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 2.2e-27 126.3 107 63.6
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 2.2e-27 126.3 107 63.6
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 2.2e-27 126.3 85 69.4
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 2.9e-27 125.9 121 61.2
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 4.9e-27 125.2 94 71.3
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 1.9e-26 123.2 86 74.4
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 7.8e-25 117.9 113 61.9
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 1.0e-24 117.5 84 69.0
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 1.9e-23 113.2 172 46.5
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 4.3e-23 112.1 172 45.9
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 4.7e-22 108.6 96 63.5
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.3e-19 100.5 84 63.1
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 1.7e-19 100.1 125 60.8
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.7e-19 100.1 84 63.1
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 1.4e-18 97.1 145 51.7
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 4.2e-18 95.5 128 51.6
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 2.3e-16 89.7 44 79.5
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 7.3e-15 84.7 112 53.6
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 1.3e-14 84.0 128 43.8
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 2.0e-12 76.6 58 67.2
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 1.7e-11 73.6 100 50.0
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 7.1e-10 68.2 48 68.8
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 1.6e-09 67.0 37 89.2
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 7.9e-09 64.7 31 83.9
DCAR_012259 Daucus carota HOM05D007375 ORTHO05D009293 1.9e-07 60.1 116 44.0
Cre03.g201050 Chlamydomonas reinhardtii HOM05D007375 ORTHO05D009293 3.7e-06 55.8 106 29.2
PGR119G2080 Punica granatum HOM05D007375 ORTHO05D009293 8.1e-06 54.7 86 46.5


User provided reference genes

Program Settings