Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.0e-90 336.7 161 100.0
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.3e-82 309.7 163 92.0
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.6e-80 302.8 152 96.1
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 6.8e-79 297.4 163 88.3
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 8.9e-79 297.0 160 88.8
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 2.6e-78 295.4 162 87.0
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.2e-77 292.4 157 89.2
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.3e-77 290.4 157 89.2
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 8.3e-77 290.4 162 85.2
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.9e-76 289.3 162 85.2
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.9e-76 289.3 158 87.3
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 3.2e-76 288.5 157 88.5
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 7.1e-76 287.3 163 83.4
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 1.6e-75 286.2 162 83.3
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.1e-75 285.8 163 82.8
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.1e-75 285.8 163 82.8
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 3.5e-75 285.0 163 85.3
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 6.0e-75 284.3 160 83.1
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.7e-74 282.7 161 82.6
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.7e-74 282.7 161 82.0
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 3.9e-74 281.6 160 82.5
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.1e-74 281.2 161 85.7
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 8.6e-74 280.4 161 84.5
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.3e-73 278.5 163 81.0
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 7.3e-73 277.3 163 81.0
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 3.6e-72 275.0 161 81.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.7e-72 274.6 161 81.4
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 6.2e-72 274.2 159 80.5
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.1e-71 271.9 162 82.7
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 4.0e-71 271.6 157 82.2
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 5.2e-71 271.2 162 82.7
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 6.8e-71 270.8 163 79.1
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 4.4e-70 268.1 157 80.3
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 5.8e-70 267.7 163 77.9
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 5.8e-70 267.7 160 79.4
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 5.8e-70 267.7 157 82.2
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 9.9e-70 266.9 161 78.3
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.3e-69 266.5 162 80.9
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.3e-69 266.5 158 79.1
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.3e-69 266.5 157 80.3
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.7e-69 266.2 163 78.5
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.2e-69 265.8 162 81.5
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 2.9e-69 265.4 160 78.8
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.9e-69 265.4 161 80.1
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 6.4e-69 264.2 162 82.1
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 8.4e-69 263.8 159 76.7
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.1e-68 263.5 160 77.5
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.4e-68 263.1 158 77.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.4e-68 263.1 157 79.0
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 2.4e-68 262.3 159 78.6
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 2.4e-68 262.3 159 76.1
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 2.4e-68 262.3 158 77.8
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 3.2e-68 261.9 162 81.5
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 4.1e-68 261.5 159 76.1
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 5.4e-68 261.2 160 76.9
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 5.4e-68 261.2 163 77.3
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 7.1e-68 260.8 159 77.4
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.2e-68 260.4 164 79.3
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 9.2e-68 260.4 159 75.5
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.2e-67 260.0 148 82.4
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 2.1e-67 259.2 157 77.1
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 2.7e-67 258.8 159 78.0
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 4.6e-67 258.1 156 78.8
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 4.6e-67 258.1 157 76.4
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 6.6e-66 254.2 145 80.7
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.5e-65 253.1 133 88.0
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.9e-65 252.7 160 78.1
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.5e-65 252.3 163 74.8
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 4.3e-65 251.5 155 78.1
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 5.6e-65 251.1 154 77.9
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 5.6e-65 251.1 159 74.8
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 9.6e-65 250.4 157 77.1
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 1.2e-64 250.0 157 76.4
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 1.2e-64 250.0 157 76.4
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 1.2e-64 250.0 157 76.4
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.6e-64 249.6 157 75.8
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.1e-64 249.2 159 76.1
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 3.6e-64 248.4 157 75.8
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 6.2e-64 247.7 159 74.8
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 6.2e-64 247.7 161 74.5
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 8.1e-64 247.3 158 70.9
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 4.0e-63 245.0 157 75.2
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 4.0e-63 245.0 157 75.2
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 2.0e-62 242.7 157 73.2
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.9e-62 240.4 158 72.2
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.9e-61 238.8 157 72.0
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 4.9e-61 238.0 160 69.4
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.1e-60 236.9 160 71.2
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 1.4e-60 236.5 160 69.4
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.6e-59 233.0 154 73.4
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.0e-58 230.3 157 74.5
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 8.7e-58 227.3 157 69.4
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 8.7e-58 227.3 159 69.2
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.5e-57 226.5 161 71.4
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.5e-57 225.7 133 81.2
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 6.9e-55 217.6 157 68.8
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.6e-54 215.7 161 64.6
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 5.1e-50 201.4 161 60.9
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 3.2e-44 182.2 92 88.0
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 9.6e-41 170.6 155 58.1
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.9e-39 164.5 159 53.5
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 2.7e-35 152.5 154 50.0
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.5e-35 152.1 118 66.1
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.1e-34 148.3 156 49.4
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 7.9e-27 124.4 153 46.4
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.3e-23 111.7 72 75.0
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.5e-21 104.4 81 65.4
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 3.9e-18 95.5 74 67.6
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.0e-06 56.6 40 60.0


User provided reference genes

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