Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023461 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.9e-107 392.5 193 100.0
CSS0048962 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.1e-106 389.0 193 99.5
CSS0001518 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.6e-103 379.4 193 96.4
CSS0002491 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 3.6e-103 378.3 193 96.9
CSS0006626 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 3.6e-103 378.3 193 96.9
CSS0008525 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 3.6e-103 378.3 193 96.9
CSS0041441 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 7.9e-98 360.5 183 96.7
CSS0030669 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 7.1e-91 337.4 193 87.6
CSS0036967 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 8.4e-84 313.9 193 84.5
Rhsim09G0003800 Rhododendron simsii HOM05D003812 ORTHO05D004393 4.6e-74 281.6 183 74.9
Actinidia18400 Actinidia chinensis HOM05D003812 ORTHO05D004393 2.3e-73 279.3 183 78.1
vmacro06691 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 1.3e-71 273.5 181 76.8
Oeu064436.1 Olea europaea HOM05D003812 ORTHO05D004393 3.9e-57 225.3 185 62.7
MSTRG.26255 Avicennia marina HOM05D003812 ORTHO05D004393 5.2e-57 224.9 179 62.6
Hma1.2p1_0381F.1_g140050 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 2.0e-56 223.0 183 61.7
Cc00_g24630 Coffea canephora HOM05D003812 ORTHO05D004393 1.2e-53 213.8 184 62.5
Migut.K00296 Erythranthe guttata HOM05D003812 ORTHO05D004393 1.6e-53 213.4 184 57.6
SGA_v2.0_scaffold12G06029 Striga asiatica HOM05D003812 ORTHO05D004393 2.0e-53 213.0 192 55.7
Peaxi162Scf00463g00428 Petunia axillaris HOM05D003812 ORTHO05D004393 2.9e-52 209.1 184 58.7
Lj4C178G3 Lonicera japonica HOM05D003812 ORTHO05D004393 1.2e-50 203.8 200 56.5
GSVIVG01038248001 Vitis vinifera HOM05D003812 ORTHO05D004393 6.1e-50 201.4 183 58.5
DCAR_023841 Daucus carota HOM05D003812 ORTHO05D004393 6.8e-49 198.0 183 55.7
TAR636G0947 Trochodendron aralioides HOM05D003812 ORTHO05D004393 1.2e-48 197.2 185 59.5
Thecc.03G204100 Theobroma cacao HOM05D003812 ORTHO05D004393 3.4e-48 195.7 184 54.3
CAN.G164.18 Capsicum annuum HOM05D003812 ORTHO05D004393 7.5e-48 194.5 183 57.4
Nitab4.5_0000160g0140 Nicotiana tabacum HOM05D003812 ORTHO05D004393 2.8e-47 192.6 184 56.5
TAR362G0390 Trochodendron aralioides HOM05D003812 ORTHO05D004393 4.8e-47 191.8 185 58.4
Nitab4.5_0003520g0020 Nicotiana tabacum HOM05D003812 ORTHO05D004393 6.3e-47 191.4 184 55.4
Sopen12g006540 Solanum pennellii HOM05D003812 ORTHO05D004393 4.1e-46 188.7 186 52.7
COL.COLO4_16818 Corchorus olitorius HOM05D003812 ORTHO05D004393 5.3e-46 188.3 184 52.7
Solyc12g011180.3 Solanum lycopersicum HOM05D003812 ORTHO05D004393 5.3e-46 188.3 183 54.6
arahy.Tifrunner.gnm1.ann1.SFVM41 Arachis hypogaea HOM05D003812 ORTHO05D004393 2.0e-45 186.4 184 52.2
arahy.Tifrunner.gnm1.ann1.U9V8RX Arachis hypogaea HOM05D003812 ORTHO05D004393 2.0e-45 186.4 184 52.2
Nn1g08169 Nelumbo nucifera HOM05D003812 ORTHO05D004393 2.7e-45 186.0 183 52.5
Ciclev10027241m.g Citrus clementina HOM05D003812 ORTHO05D004393 3.5e-45 185.7 184 52.7
Nitab4.5_0010162g0010 Nicotiana tabacum HOM05D003812 ORTHO05D004393 7.7e-45 184.5 183 53.6
Atru.chr3.1997_Atru.chr3.1998 Acer truncatum HOM05D003812 ORTHO05D004393 1.7e-44 183.3 184 55.4
SalBow5G1511 Salvia bowleyana HOM05D003812 ORTHO05D004393 3.8e-44 182.2 184 52.2
SalBow5G1547 Salvia bowleyana HOM05D003812 ORTHO05D004393 3.8e-44 182.2 184 52.2
arahy.Tifrunner.gnm1.ann1.B1HR4A Arachis hypogaea HOM05D003812 ORTHO05D004393 1.5e-43 180.3 184 52.2
arahy.Tifrunner.gnm1.ann1.CNXN93 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.5e-43 180.3 184 52.2
Aqoxy4G02750 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 2.7e-42 176.0 188 52.1
PSO170G6215 Papaver somniferum HOM05D003812 ORTHO05D004393 2.7e-42 176.0 184 53.3
Cc06_g19250 Coffea canephora HOM05D003812 ORTHO05D004393 4.7e-42 175.3 183 56.8
Lsat_1_v5_gn_8_131861 Lactuca sativa HOM05D003812 ORTHO05D004393 1.0e-41 174.1 182 52.2
MD15G1143400 Malus domestica HOM05D003812 ORTHO05D004393 2.3e-41 172.9 184 50.0
VMungo1215G0546 Vigna mungo HOM05D003812 ORTHO05D004393 2.3e-41 172.9 184 51.6
Gorai.004G122600 Gossypium raimondii HOM05D003812 ORTHO05D004393 4.0e-41 172.2 189 49.2
Lalb_Chr05g0212041 Lupinus albus HOM05D003812 ORTHO05D004393 5.2e-41 171.8 184 50.5
Cpa.g.sc151.5 Carica papaya HOM05D003812 ORTHO05D004393 6.8e-41 171.4 183 49.2
TWI63G1503 Tripterygium wilfordii HOM05D003812 ORTHO05D004393 6.8e-41 171.4 184 49.5
CANSAT54G2113 Cannabis sativa HOM05D003812 ORTHO05D004393 8.8e-41 171.0 181 50.8
Gohir.A08G102525 Gossypium hirsutum HOM05D003812 ORTHO05D004393 1.2e-40 170.6 187 49.7
ECA246G4500 Erigeron canadensis HOM05D003812 ORTHO05D004393 1.5e-40 170.2 184 50.0
Gohir.D08G113808 Gossypium hirsutum HOM05D003812 ORTHO05D004393 2.0e-40 169.9 191 48.7
Phvul.002G113100 Phaseolus vulgaris HOM05D003812 ORTHO05D004393 4.4e-40 168.7 184 49.5
Manes.01G010200 Manihot esculenta HOM05D003812 ORTHO05D004393 7.5e-40 167.9 184 48.9
Aqoxy7G02949 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 1.7e-39 166.8 188 49.5
QL10p064313 Quercus lobata HOM05D003812 ORTHO05D004393 4.9e-39 165.2 186 50.0
Lj2g0024194 Lotus japonicus HOM05D003812 ORTHO05D004393 1.4e-38 163.7 184 49.5
HanXRQChr05g0135721 Helianthus annuus HOM05D003812 ORTHO05D004393 1.8e-38 163.3 184 48.4
Lj2g0003816 Lotus japonicus HOM05D003812 ORTHO05D004393 2.4e-38 162.9 184 48.4
Sc25g0002340 Simmondsia chinensis HOM05D003812 ORTHO05D004393 3.5e-37 159.1 183 46.4
Sc13g0007550 Simmondsia chinensis HOM05D003812 ORTHO05D004393 7.7e-37 157.9 183 45.9
Prupe.7G062100 Prunus persica HOM05D003812 ORTHO05D004393 2.9e-36 156.0 184 46.2
Psat3g143480 Pisum sativum HOM05D003812 ORTHO05D004393 1.5e-35 153.7 184 48.4
RcHm_v2.0_Chr2g0084531 Rosa chinensis HOM05D003812 ORTHO05D004393 1.5e-35 153.7 185 45.9
PGR142G2470 Punica granatum HOM05D003812 ORTHO05D004393 1.9e-35 153.3 181 50.3
CsaV3_5G037130 Cucumis sativus L. HOM05D003812 ORTHO05D004393 3.3e-35 152.5 184 47.3
Cfa008512 Carpinus fangiana HOM05D003812 ORTHO05D004393 4.2e-35 152.1 187 46.5
ClCG09G014660 Citrullus lanatus HOM05D003812 ORTHO05D004393 9.5e-35 151.0 184 45.7
Hund12300 Selenicereus undatus HOM05D003812 ORTHO05D004393 1.2e-34 150.6 191 45.0
Glyma.11G082800 Glycine max HOM05D003812 ORTHO05D004393 4.7e-34 148.7 184 45.1
VMungo0251G1870 Vigna mungo HOM05D000140 ORTHO05D004393 4.7e-34 148.7 185 44.9
Medtr7g059160 Medicago truncatula HOM05D003812 ORTHO05D004393 1.8e-33 146.7 184 45.1
CARHR188960 Cardamine hirsuta HOM05D003812 ORTHO05D004393 3.0e-33 146.0 182 44.5
Sed0027703 Sechium edule HOM05D003812 ORTHO05D004393 6.8e-33 144.8 184 44.0
Potri.017G007200 Populus trichocarpa HOM05D003812 ORTHO05D004393 8.9e-33 144.4 185 44.3
SEGI_23375 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 1.5e-32 143.7 186 43.5
Sabra17G0008000 Salix brachista HOM05D003812 ORTHO05D004393 2.0e-32 143.3 187 43.9
Ca_17095_v3 Cicer arietinum L. HOM05D003812 ORTHO05D004393 4.4e-32 142.1 184 44.0
MELO3C026683.2 Cucumis melo HOM05D003812 ORTHO05D004393 1.3e-31 140.6 185 46.5
AL6G36030 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 2.8e-31 139.4 182 42.3
AT5G24450 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 2.8e-31 139.4 182 44.0
AT3G49410 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 3.7e-31 139.0 182 40.1
FAN07G0162 Fragaria x ananassa HOM05D004444 ORTHO05D005246 1.1e-30 137.5 182 43.4
FAN07G2723 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.1e-30 137.5 182 43.4
FAN26G2119 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.4e-30 137.1 189 39.2
THA.LOC104814949 Tarenaya hassleriana HOM05D003812 ORTHO05D004393 1.4e-30 137.1 182 43.4
Aa31LG11G3700 Aethionema arabicum HOM05D003812 ORTHO05D004393 2.4e-30 136.3 181 42.5
Aa31LG4G17960 Aethionema arabicum HOM05D003812 ORTHO05D004393 2.4e-30 136.3 181 39.8
FvH4_1g00230 Fragaria vesca HOM05D003812 ORTHO05D004393 3.2e-30 136.0 189 41.8
FvH4_4g37371 Fragaria vesca HOM05D003812 ORTHO05D004393 3.2e-30 136.0 184 42.4
BcaB05g23118 Brassica carinata HOM05D003812 ORTHO05D004393 5.4e-30 135.2 182 39.6
TPR.G23263 Trifolium pratense HOM05D003812 ORTHO05D004393 5.4e-30 135.2 184 42.9
Carub.0005s1566 Capsella rubella HOM05D003812 ORTHO05D004393 9.2e-30 134.4 182 38.5
FAN17G2490 Fragaria x ananassa HOM05D004444 ORTHO05D005246 9.2e-30 134.4 177 43.5
Thhalv10010256m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 1.2e-29 134.0 182 38.5
Sp2g22880 Schrenkiella parvula HOM05D003812 ORTHO05D004393 1.2e-29 134.0 182 41.2
BraA01t02385Z Brassica rapa HOM05D003812 ORTHO05D004393 1.6e-29 133.7 182 37.4
Carub.0006s2228 Capsella rubella HOM05D003812 ORTHO05D004393 1.6e-29 133.7 182 41.8
Sp5g12660 Schrenkiella parvula HOM05D003812 ORTHO05D004393 1.6e-29 133.7 182 37.9
A01p24730 Brassica napus HOM05D003812 ORTHO05D004393 2.0e-29 133.3 182 36.8
BraA02t09001Z Brassica rapa HOM05D003812 ORTHO05D004393 2.0e-29 133.3 182 42.3
AL5G29170 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 4.6e-29 132.1 182 39.0
C01p30850 Brassica napus HOM05D003812 ORTHO05D004393 1.0e-28 131.0 182 38.5
BolC1t03017H Brassica oleracea HOM05D003812 ORTHO05D004393 1.0e-28 131.0 182 38.5
BcaB07g29910 Brassica carinata HOM05D003812 ORTHO05D004393 1.3e-28 130.6 182 39.6
BcaC03g17974 Brassica carinata HOM05D003812 ORTHO05D004393 1.3e-28 130.6 182 41.2
BolC2t12085H Brassica oleracea HOM05D003812 ORTHO05D004393 1.3e-28 130.6 182 41.2
CARHR158380 Cardamine hirsuta HOM05D003812 ORTHO05D004393 2.9e-28 129.4 182 39.6
Thhalv10003925m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 3.9e-28 129.0 182 40.1
BcaC09g49951 Brassica carinata HOM05D003812 ORTHO05D004393 5.0e-28 128.6 182 37.9
A02p40330 Brassica napus HOM05D003812 ORTHO05D004393 6.6e-28 128.3 183 40.4
TPR.G11261 Trifolium pratense HOM05D003812 ORTHO05D004393 1.1e-27 127.5 184 42.4
Potri.007G145000 Populus trichocarpa HOM05D003812 ORTHO05D004393 4.3e-27 125.6 183 39.3
C02p60290 Brassica napus HOM05D003812 ORTHO05D004393 6.1e-26 121.7 183 38.8
BcaB01g00718 Brassica carinata HOM05D003812 ORTHO05D004393 1.5e-24 117.1 182 39.6
ATR0580G406 Amborella trichopoda HOM05D003812 ORTHO05D004393 2.6e-24 116.3 184 40.2
HPP92_018576 Vanilla planifolia HOM05D003812 ORTHO05D004393 3.7e-23 112.5 175 38.9
Mapoly0019s0182 Marchantia polymorpha HOM05D003812 ORTHO05D004393 4.9e-23 112.1 182 38.5
VMungo1268G0001 Vigna mungo HOM05D003812 ORTHO05D004393 4.9e-23 112.1 183 38.3
BolC2t12088H Brassica oleracea HOM05D003812 ORTHO05D004393 6.4e-23 111.7 185 36.2
Pp3c16_3240 Physcomitrium patens HOM05D003812 ORTHO05D004393 2.4e-22 109.8 183 37.7
arahy.Tifrunner.gnm1.ann1.05VQ85 Arachis hypogaea HOM05D003812 ORTHO05D004393 4.1e-22 109.0 155 37.4
SMO367G0920 Selaginella moellendorffii HOM05D003812 ORTHO05D004393 1.2e-21 107.5 183 35.0
Ah.13g073190 Amaranthus hybridus HOM05D003812 ORTHO05D004393 6.0e-21 105.1 140 46.4
AUR62023711 Chenopodium quinoa HOM05D003812 ORTHO05D004393 6.0e-21 105.1 141 45.4
unitig_37.g12590 Utricularia gibba HOM05D003812 ORTHO05D004393 7.8e-21 104.8 82 58.5
Haze_11133 Corylus avellana HOM05D003812 ORTHO05D004393 2.3e-20 103.2 151 40.4
EL10Ac3g06164 Beta vulgaris HOM05D003812 ORTHO05D004393 6.6e-20 101.7 77 63.6
MBI16_g29049_MAGBIO Magnolia biondii HOM05D003812 ORTHO05D004393 4.3e-19 99.0 120 50.8
CiPaw.01G201400 Carya illinoinensis HOM05D003812 ORTHO05D004393 7.3e-19 98.2 61 78.7
BcaB07g31049 Brassica carinata HOM05D003812 ORTHO05D004393 6.2e-18 95.1 77 54.5
Nitab4.5_0001168g0120 Nicotiana tabacum HOM05D003812 ORTHO05D004393 1.4e-17 94.0 154 38.3
AagrBONN_evm.TU.Sc2ySwM_344.3654 Anthoceros agrestis HOM05D003812 ORTHO05D004393 8.9e-17 91.3 185 33.5
CDE05G0093 Ceratophyllum demersum HOM05D003812 ORTHO05D004393 7.5e-16 88.2 247 29.6
Zm00001eb420200 Zea mays HOM05D003812 ORTHO05D004393 1.3e-15 87.4 178 33.7
BcaC03g17970 Brassica carinata HOM05D003812 ORTHO05D004393 3.9e-12 75.9 182 27.5
SHI01261 Sapria himalayana HOM05D003812 ORTHO05D004393 1.2e-10 70.9 121 38.0
CBR_g26464 Chara braunii HOM05D003812 ORTHO05D004393 3.2e-06 56.2 109 27.5
FAN20G1426 Fragaria x ananassa HOM05D003812 ORTHO05D004393 9.2e-06 54.7 128 35.2


User provided reference genes

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