Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023448 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.5e-153 545.4 283 100.0
CSS0045249 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.4e-95 353.6 280 68.6
CSS0041689 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 6.1e-91 338.2 271 67.9
CSS0024032 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 9.5e-68 261.2 322 49.7
CSS0038691 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 8.9e-66 254.6 155 80.0
CSS0043933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.6e-65 253.1 276 52.2
CSS0017543 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.6e-62 243.8 223 60.5
CSS0021727 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.4e-58 229.9 272 52.6
CSS0020511 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.2e-56 223.4 275 48.4
CSS0019933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 4.1e-55 219.2 264 50.0
CSS0017779 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.5e-52 210.7 325 43.7
CSS0044261 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 3.3e-52 209.5 308 44.8
vmacro21029 Vaccinium macrocarpon HOM05D001320 ORTHO05D002136 2.6e-09 67.0 195 30.8
FAN25G3366 Fragaria x ananassa HOM05D016656 ORTHO05D015012 7.7e-09 65.5 190 29.5
FAN21G3222 Fragaria x ananassa HOM05D016656 ORTHO05D015012 5.0e-08 62.8 117 35.9
RcHm_v2.0_Chr5g0049171 Rosa chinensis HOM05D016656 ORTHO05D003639 6.5e-08 62.4 107 36.4
FvH4_3g26742 Fragaria vesca HOM05D016656 ORTHO05D003639 4.2e-07 59.7 190 28.4
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 4.2e-07 59.7 103 29.1
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 5.5e-07 59.3 103 32.0
Peaxi162Scf00169g01112 Petunia axillaris HOM05D008778 ORTHO05D003639 7.2e-07 58.9 107 34.6
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 7.2e-07 58.9 103 32.0
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 7.2e-07 58.9 103 32.0
vmacro10953 Vaccinium macrocarpon HOM05D014670 ORTHO05D013651 1.2e-06 58.2 78 38.5
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 1.6e-06 57.8 104 34.6
CSS0041949 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 2.1e-06 57.4 163 31.3
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.6e-06 56.6 103 28.2
CSS0024724 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 4.7e-06 56.2 162 31.5
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 4.7e-06 56.2 106 33.0
CSS0022979 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 7.9e-06 55.5 159 30.8


User provided reference genes

Program Settings