Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 1.3e-44 183.0 109 100.0
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 9.8e-29 130.2 73 83.6
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 1.3e-28 129.8 74 78.4
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 1.1e-27 126.7 74 79.7
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 1.8e-27 125.9 73 80.8
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 3.1e-27 125.2 74 77.0
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 3.1e-27 125.2 89 73.0
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 3.1e-27 125.2 74 79.7
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 4.1e-27 124.8 93 68.8
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 4.1e-27 124.8 73 80.8
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 9.1e-27 123.6 74 77.0
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 9.1e-27 123.6 74 77.0
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 1.2e-26 123.2 73 80.8
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 1.6e-26 122.9 73 76.7
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 2.0e-26 122.5 73 80.8
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 2.7e-26 122.1 74 79.7
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 4.5e-26 121.3 75 76.0
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 5.9e-26 120.9 73 74.0
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 5.9e-26 120.9 73 72.6
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 7.7e-26 120.6 75 72.0
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 7.7e-26 120.6 77 70.1
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 7.7e-26 120.6 77 70.1
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 1.3e-25 119.8 73 72.6
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 1.7e-25 119.4 75 77.3
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 2.3e-25 119.0 77 70.1
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 2.3e-25 119.0 73 72.6
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 2.3e-25 119.0 75 73.3
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 2.9e-25 118.6 74 74.3
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 3.8e-25 118.2 73 71.2
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 3.8e-25 118.2 73 74.0
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 3.8e-25 118.2 90 67.8
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 3.8e-25 118.2 74 73.0
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 5.0e-25 117.9 89 68.5
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 6.5e-25 117.5 73 74.0
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 6.5e-25 117.5 73 71.2
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 6.5e-25 117.5 73 72.6
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 8.6e-25 117.1 73 71.2
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 8.6e-25 117.1 73 71.2
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 8.6e-25 117.1 73 71.2
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 8.6e-25 117.1 81 72.8
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 8.6e-25 117.1 73 69.9
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 8.6e-25 117.1 74 74.3
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 1.1e-24 116.7 73 75.3
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 1.5e-24 116.3 74 68.9
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 1.5e-24 116.3 73 72.6
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 1.9e-24 115.9 73 72.6
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 1.9e-24 115.9 72 70.8
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 1.9e-24 115.9 73 75.3
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 3.3e-24 115.2 73 75.3
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 4.2e-24 114.8 72 73.6
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 5.5e-24 114.4 74 73.0
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 1.2e-23 113.2 89 69.7
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 1.2e-23 113.2 73 71.2
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 2.8e-23 112.1 72 68.1
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 3.6e-23 111.7 72 69.4
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 3.6e-23 111.7 78 67.9
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 6.1e-23 110.9 76 69.7
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 6.1e-23 110.9 76 69.7
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 3.0e-22 108.6 79 67.1
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 5.2e-22 107.8 78 62.8
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 8.9e-22 107.1 73 74.0
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 7.5e-21 104.0 90 61.1
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 3.1e-19 98.6 72 63.9
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 4.1e-19 98.2 80 63.8
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 4.5e-18 94.7 102 53.9
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 7.8e-18 94.0 74 63.5
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 1.0e-17 93.6 55 72.7
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 3.8e-17 91.7 81 56.8
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 6.6e-17 90.9 76 57.9
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 2.5e-16 89.0 50 76.0
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 2.5e-16 89.0 81 60.5
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 5.6e-16 87.8 81 59.3
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 8.9e-14 80.5 50 72.0
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 4.3e-08 61.6 73 39.7
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 1.6e-07 59.7 75 42.7
FAN12G0891 Fragaria x ananassa HOM05D007940 ORTHO05D010046 6.2e-07 57.8 36 69.4
FAN24G2461 Fragaria x ananassa HOM05D000188 ORTHO05D000362 6.2e-07 57.8 36 69.4
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 6.2e-07 57.8 36 69.4
FAN03G3294 Fragaria x ananassa HOM05D004346 ORTHO05D005153 1.4e-06 56.6 35 71.4
FAN20G1268 Fragaria x ananassa HOM05D007940 ORTHO05D010046 4.0e-06 55.1 35 68.6


User provided reference genes

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