Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.8e-47 192.2 95 100.0
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 2.4e-39 165.2 93 83.9
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 4.1e-39 164.5 92 87.0
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 1.5e-38 162.5 92 83.7
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 2.0e-38 162.2 92 83.7
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 2.6e-38 161.8 92 83.7
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 3.4e-38 161.4 93 84.9
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 5.9e-38 160.6 89 84.3
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 7.7e-38 160.2 90 84.4
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 1.0e-37 159.8 87 88.5
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.3e-37 159.5 92 82.6
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 1.3e-37 159.5 90 81.1
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 1.7e-37 159.1 97 80.4
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 2.2e-37 158.7 92 82.6
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 2.2e-37 158.7 92 82.6
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 2.2e-37 158.7 92 82.6
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 2.9e-37 158.3 92 79.3
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 5.0e-37 157.5 92 81.5
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 5.0e-37 157.5 91 82.4
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 8.5e-37 156.8 91 82.4
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 8.5e-37 156.8 91 78.0
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 1.1e-36 156.4 90 83.3
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 1.1e-36 156.4 88 85.2
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.9e-36 155.6 91 83.5
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 1.9e-36 155.6 89 83.1
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 3.2e-36 154.8 90 78.9
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 3.2e-36 154.8 87 83.9
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 3.2e-36 154.8 92 82.6
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 4.2e-36 154.5 92 81.5
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 5.5e-36 154.1 90 82.2
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 5.5e-36 154.1 94 76.6
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 7.2e-36 153.7 90 83.3
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 9.4e-36 153.3 90 82.2
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 1.2e-35 152.9 92 79.3
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.1e-35 152.1 92 81.5
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 2.1e-35 152.1 90 81.1
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 2.7e-35 151.8 87 82.8
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 3.6e-35 151.4 90 77.8
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 3.6e-35 151.4 90 81.1
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 4.7e-35 151.0 92 82.6
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 6.1e-35 150.6 89 79.8
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 6.1e-35 150.6 88 79.5
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 7.9e-35 150.2 89 77.5
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 7.9e-35 150.2 95 77.9
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 2.3e-34 148.7 92 77.2
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 2.3e-34 148.7 92 77.2
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 2.3e-34 148.7 92 77.2
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 3.9e-34 147.9 92 78.3
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 3.9e-34 147.9 94 76.6
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 5.2e-34 147.5 91 76.9
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 5.2e-34 147.5 90 76.7
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 6.7e-34 147.1 92 75.0
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 8.8e-34 146.7 93 75.3
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 8.8e-34 146.7 97 78.4
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.1e-33 146.4 89 78.7
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.1e-33 146.4 89 78.7
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.5e-33 146.0 92 76.1
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 2.6e-33 145.2 90 76.7
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 2.6e-33 145.2 92 73.9
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 2.6e-33 145.2 93 77.4
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 3.3e-33 144.8 93 76.3
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 3.3e-33 144.8 93 76.3
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 3.3e-33 144.8 90 78.9
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.3e-33 144.8 90 78.9
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.3e-33 144.8 90 78.9
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.3e-33 144.8 90 78.9
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.3e-33 144.8 90 78.9
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 4.4e-33 144.4 91 78.0
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 5.7e-33 144.1 88 80.7
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 9.7e-33 143.3 94 74.5
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 1.3e-32 142.9 87 77.0
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.7e-32 142.5 92 79.3
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 2.2e-32 142.1 90 74.4
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 3.7e-32 141.4 92 73.9
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 3.7e-32 141.4 91 72.5
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 3.7e-32 141.4 91 72.5
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 4.8e-32 141.0 90 80.0
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 4.8e-32 141.0 94 71.3
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 8.2e-32 140.2 92 78.3
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 1.1e-31 139.8 90 68.9
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 5.3e-31 137.5 91 70.3
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 7.0e-31 137.1 90 77.8
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 3.5e-30 134.8 74 81.1
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 5.5e-28 127.5 65 87.7
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 1.2e-27 126.3 86 69.8
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 1.2e-27 126.3 86 69.8
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 1.2e-27 126.3 65 86.2
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 1.2e-27 126.3 90 65.6
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 4.7e-27 124.4 84 75.0
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 1.0e-26 123.2 74 73.0
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 1.8e-26 122.5 83 74.7
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 5.2e-26 120.9 72 77.8
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 1.5e-25 119.4 71 73.2
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.1e-23 113.2 88 68.2
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 3.8e-21 104.8 87 63.2
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 8.5e-21 103.6 85 56.5
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 9.8e-17 90.1 49 77.6
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 6.5e-13 77.4 96 42.7
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 4.2e-12 74.7 46 69.6
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 1.2e-11 73.2 82 42.7
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 1.0e-10 70.1 82 40.2


User provided reference genes

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