Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023322 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D112183 0.0e+00 1334.7 716 100.0
Atru.chr3.3982 Acer truncatum HOM05D000758 ORTHO05D001216 1.6e-10 72.4 86 45.3
Atru.chr3.3985 Acer truncatum HOM05D000758 ORTHO05D001216 1.6e-10 72.4 86 45.3
CiPaw.13G092400 Carya illinoinensis HOM05D000758 ORTHO05D001216 3.5e-10 71.2 89 48.3
Rhsim13G0081000 Rhododendron simsii HOM05D000758 ORTHO05D001216 1.3e-09 69.3 89 43.8
Rhsim13G0081300 Rhododendron simsii HOM05D000758 ORTHO05D001216 2.3e-09 68.6 89 43.8
Sed0009319 Sechium edule HOM05D000758 ORTHO05D001216 3.0e-09 68.2 89 47.2
QL01p031422 Quercus lobata HOM05D000758 ORTHO05D001216 5.1e-09 67.4 53 62.3
TAR633G1047 Trochodendron aralioides HOM05D000758 ORTHO05D001216 5.1e-09 67.4 77 51.9
MD03G1089900 Malus domestica HOM05D000758 ORTHO05D001216 8.7e-09 66.6 89 42.7
vmacro03059 Vaccinium macrocarpon HOM05D000758 ORTHO05D001216 1.1e-08 66.2 88 43.2
Aqoxy1G00919 Aquilegia oxysepala HOM05D000758 ORTHO05D001216 1.5e-08 65.9 89 41.6
CANSAT54G2294 Cannabis sativa HOM05D000758 ORTHO05D001216 1.5e-08 65.9 75 52.0
Cfa001457 Carpinus fangiana HOM05D000758 ORTHO05D001216 1.9e-08 65.5 76 48.7
Gohir.A05G094600 Gossypium hirsutum HOM05D000758 ORTHO05D001216 1.9e-08 65.5 85 44.7
RcHm_v2.0_Chr5g0065401 Rosa chinensis HOM05D000758 ORTHO05D001216 1.9e-08 65.5 89 46.1
TWI75G0926 Tripterygium wilfordii HOM05D000758 ORTHO05D001216 1.9e-08 65.5 91 41.8
Ciclev10027927m.g Citrus clementina HOM05D000758 ORTHO05D001216 2.5e-08 65.1 89 41.6
Potri.008G057300 Populus trichocarpa HOM05D000758 ORTHO05D001216 2.5e-08 65.1 76 46.1
FAN11G3031 Fragaria x ananassa HOM05D000758 ORTHO05D001216 3.3e-08 64.7 89 44.9
Cfa011519 Carpinus fangiana HOM05D000758 ORTHO05D001216 5.6e-08 63.9 89 43.8
Haze_24117 Corylus avellana HOM05D000758 ORTHO05D001216 5.6e-08 63.9 49 61.2
Dinv17022 Davidia involucrata HOM05D000758 ORTHO05D001216 5.6e-08 63.9 89 42.7
Dinv42970 Davidia involucrata HOM05D000758 ORTHO05D001216 5.6e-08 63.9 89 42.7
Dinv43129 Davidia involucrata HOM05D000758 ORTHO05D001216 5.6e-08 63.9 89 42.7
Duzib150G1153 Durio zibethinus HOM05D000758 ORTHO05D001216 5.6e-08 63.9 85 45.9
Gohir.D05G095000 Gossypium hirsutum HOM05D000758 ORTHO05D001216 5.6e-08 63.9 85 43.5
Gorai.009G098300 Gossypium raimondii HOM05D000758 ORTHO05D001216 5.6e-08 63.9 85 43.5
Manes.02G131166 Manihot esculenta HOM05D000758 ORTHO05D001216 5.6e-08 63.9 75 46.7
QL08p059536 Quercus lobata HOM05D000758 ORTHO05D001216 5.6e-08 63.9 76 48.7
THA.LOC104800672 Tarenaya hassleriana HOM05D000758 ORTHO05D001216 5.6e-08 63.9 86 44.2
Haze_17083 Corylus avellana HOM05D000758 ORTHO05D001216 7.4e-08 63.5 76 46.1
Dinv00887 Davidia involucrata HOM05D000758 ORTHO05D001216 7.4e-08 63.5 50 60.0
Dinv04181 Davidia involucrata HOM05D000758 ORTHO05D001216 7.4e-08 63.5 50 60.0
TWI31G1035 Tripterygium wilfordii HOM05D000758 ORTHO05D001216 7.4e-08 63.5 89 41.6
Duzib168G0294 Durio zibethinus HOM05D000758 ORTHO05D001216 9.6e-08 63.2 85 44.7
GSVIVG01024936001 Vitis vinifera HOM05D000758 ORTHO05D001216 9.6e-08 63.2 50 60.0
Manes.10G029300 Manihot esculenta HOM05D000758 ORTHO05D001216 1.3e-07 62.8 78 44.9
Nn2g11144 Nelumbo nucifera HOM05D000758 ORTHO05D001216 1.3e-07 62.8 88 42.0
Sabra09G0022700 Salix brachista HOM05D000758 ORTHO05D001216 2.1e-07 62.0 89 43.8
FAN16G2884 Fragaria x ananassa HOM05D000758 ORTHO05D001216 2.8e-07 61.6 89 43.8
GSVIVG01016524001 Vitis vinifera HOM05D000758 ORTHO05D001216 2.8e-07 61.6 77 45.5
ClCG07G003440 Citrullus lanatus HOM05D000758 ORTHO05D001216 3.7e-07 61.2 89 41.6
COL.COLO4_18531 Corchorus olitorius HOM05D000758 ORTHO05D001216 3.7e-07 61.2 50 58.0
TWI79G0413 Tripterygium wilfordii HOM05D000758 ORTHO05D001216 3.7e-07 61.2 53 54.7
CsaV3_5G008180 Cucumis sativus L. HOM05D000758 ORTHO05D001216 4.8e-07 60.8 89 40.4
Duzib170G0081 Durio zibethinus HOM05D000758 ORTHO05D001216 4.8e-07 60.8 51 60.8
Sc21g0005880 Simmondsia chinensis HOM05D000758 ORTHO05D001216 4.8e-07 60.8 92 34.8
Thecc.09G319700 Theobroma cacao HOM05D000758 ORTHO05D001216 4.8e-07 60.8 50 58.0
Lsat_1_v5_gn_5_169961 Lactuca sativa HOM05D000758 ORTHO05D001216 6.2e-07 60.5 83 39.8
Sc11g0007910 Simmondsia chinensis HOM05D000758 ORTHO05D001216 6.2e-07 60.5 89 41.6
Actinidia34416 Actinidia chinensis HOM05D000758 ORTHO05D001216 8.2e-07 60.1 89 37.1
AT3G46590 Arabidopsis thaliana HOM05D000758 ORTHO05D001216 8.2e-07 60.1 50 60.0
CiPaw.02G185100 Carya illinoinensis HOM05D000758 ORTHO05D001216 8.2e-07 60.1 78 46.2
MELO3C023869.2 Cucumis melo HOM05D000758 ORTHO05D001216 8.2e-07 60.1 89 40.4
Dinv00886 Davidia involucrata HOM05D000758 ORTHO05D001216 8.2e-07 60.1 91 37.4
CSS0004039 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D001216 1.1e-06 59.7 89 37.1
CSS0010319 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D001216 1.4e-06 59.3 76 48.7
Gohir.D03G124000 Gossypium hirsutum HOM05D000758 ORTHO05D001216 1.4e-06 59.3 83 43.4
PSO339G3709 Papaver somniferum HOM05D000758 ORTHO05D001216 1.4e-06 59.3 48 60.4
Prupe.6G074100 Prunus persica HOM05D000758 ORTHO05D001216 1.4e-06 59.3 89 41.6
Hund18897 Selenicereus undatus HOM05D000758 ORTHO05D001216 1.4e-06 59.3 60 46.7
Dinv04183 Davidia involucrata HOM05D000758 ORTHO05D001216 1.8e-06 58.9 74 41.9
Thhalv10002472m.g Eutrema salsugineum HOM05D000758 ORTHO05D001216 1.8e-06 58.9 50 56.0
FvH4_7g22710 Fragaria vesca HOM05D000758 ORTHO05D001216 1.8e-06 58.9 76 47.4
FAN06G1191 Fragaria x ananassa HOM05D000758 ORTHO05D001216 1.8e-06 58.9 76 47.4
Hma1.2p1_1420F.1_g282320 Hydrangea macrophylla HOM05D000758 ORTHO05D001216 1.8e-06 58.9 54 51.9
Aa31LG4G15590 Aethionema arabicum HOM05D000758 ORTHO05D001216 2.4e-06 58.5 50 56.0
AL5G25480 Arabidopsis lyrata HOM05D000758 ORTHO05D001216 2.4e-06 58.5 50 56.0
ECA248G1165 Erigeron canadensis HOM05D000758 ORTHO05D001216 2.4e-06 58.5 80 41.2
PSO151G0094 Papaver somniferum HOM05D000758 ORTHO05D001216 2.4e-06 58.5 48 60.4
Sp5g15110 Schrenkiella parvula HOM05D000758 ORTHO05D001216 2.4e-06 58.5 50 56.0
Actinidia07024 Actinidia chinensis HOM05D000758 ORTHO05D001216 3.1e-06 58.2 89 39.3
CSS0005261 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D001216 3.1e-06 58.2 89 39.3
Ca_01318_v3 Cicer arietinum L. HOM05D000758 ORTHO05D001216 3.1e-06 58.2 49 59.2
FAN01G1782 Fragaria x ananassa HOM05D000758 ORTHO05D001216 3.1e-06 58.2 76 46.1
Gohir.A10G220500 Gossypium hirsutum HOM05D000758 ORTHO05D001216 3.1e-06 58.2 89 36.0
Gohir.D10G232700 Gossypium hirsutum HOM05D000758 ORTHO05D001216 3.1e-06 58.2 89 36.0
EL10Ac7g16036 Beta vulgaris HOM05D000758 ORTHO05D001216 4.0e-06 57.8 58 46.6
Carub.0005s1286 Capsella rubella HOM05D000758 ORTHO05D001216 4.0e-06 57.8 50 56.0
FAN25G0218 Fragaria x ananassa HOM05D000758 ORTHO05D001216 4.0e-06 57.8 48 58.3
Nn2g13376 Nelumbo nucifera HOM05D000758 ORTHO05D001216 4.0e-06 57.8 89 38.2
Phvul.L006443 Phaseolus vulgaris HOM05D000758 ORTHO05D001216 4.0e-06 57.8 44 70.5
THA.LOC104816078 Tarenaya hassleriana HOM05D000758 ORTHO05D001216 4.0e-06 57.8 51 52.9
Actinidia02941 Actinidia chinensis HOM05D000758 ORTHO05D001216 5.3e-06 57.4 89 39.3
FvH4_3g36520 Fragaria vesca HOM05D000758 ORTHO05D001216 5.3e-06 57.4 48 56.2
Glyma.13G337100 Glycine max HOM05D000758 ORTHO05D001216 5.3e-06 57.4 89 37.1
SalBow3G4359 Salvia bowleyana HOM05D000758 ORTHO05D001216 5.3e-06 57.4 89 39.3
FAN01G3122 Fragaria x ananassa HOM05D000758 ORTHO05D001216 6.9e-06 57.0 76 46.1
FAN21G2472 Fragaria x ananassa HOM05D000758 ORTHO05D001216 6.9e-06 57.0 48 56.2
Gohir.A03G043400 Gossypium hirsutum HOM05D000758 ORTHO05D001216 6.9e-06 57.0 83 42.2
Gorai.003G130700 Gossypium raimondii HOM05D000758 ORTHO05D001216 6.9e-06 57.0 83 42.2
Hma1.2p1_0615F.1_g189855 Hydrangea macrophylla HOM05D000758 ORTHO05D001216 6.9e-06 57.0 50 56.0
RcHm_v2.0_Chr5g0065451 Rosa chinensis HOM05D000758 ORTHO05D001216 6.9e-06 57.0 48 56.2
FAN03G1477 Fragaria x ananassa HOM05D000758 ORTHO05D001216 9.0e-06 56.6 76 44.7
FAN10G1936 Fragaria x ananassa HOM05D000758 ORTHO05D001216 9.0e-06 56.6 76 44.7
MD11G1099200 Malus domestica HOM05D000758 ORTHO05D001216 9.0e-06 56.6 205 26.3
THA.LOC104810771 Tarenaya hassleriana HOM05D000758 ORTHO05D001216 9.0e-06 56.6 47 59.6


User provided reference genes

Program Settings